Salmo trutta (river trout): 115164876
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Entry
115164876 CDS
T08542
Name
(RefSeq) caspase recruitment domain-containing protein 9-like isoform X1
KO
K12794
caspase recruitment domain-containing protein 9
Organism
stru
Salmo trutta (river trout)
Pathway
stru04621
NOD-like receptor signaling pathway
stru04625
C-type lectin receptor signaling pathway
stru05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
115164876
04625 C-type lectin receptor signaling pathway
115164876
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115164876
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CARD
GCIP_C
USHBP1_PDZ-bd
KASH_CCD
Motif
Other DBs
NCBI-GeneID:
115164876
NCBI-ProteinID:
XP_029573617
Ensembl:
ENSSTUG00000029689
LinkDB
All DBs
Position
27:30206949..30212647
Genome browser
AA seq
548 aa
AA seq
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MTDSQSVSDMEDEECWVQLEDYRMLLIKTIEPSRITPYLRHCKVLSSEDEEQIFNDPSLV
TRQRKVGVLLDILQRTGHKGYVTFLESLELDYPRLYRKITGKEPARVFSVLVDTVGESGL
TQFLMSEVTRLQKGLQEERRRRQEATWAAATQEDALRQQQVKERELRKQQERVQCMREER
DRQWEVVCHLKDENYSLMHNVTKLSEEKNSALMSNRDLQLEIEKLKHSLMKAESDSKIQR
KQTVNLKNAIEERPSQDMIWQLQRHNDLLTVRIQELESSAQQGTAPAPLDQEKLSVESLE
DYKQHSQAQHQELVNNIYNLRRDLHDAEALRNRYLEAKEVLELKCTTLKKDAKMYRDRME
DILKQMDEVIRERDKAIASREEYHQENSRSLQEKDQYRKQIRELGERCDELQVQLFRTEA
EVMALQTRLHINTCSPHDKSQTSEEDCRDTLTEASSGDLQCQTSGEYDVCIALQVHPLCA
EGSPEDNISGERALSEDEPSDCSKPRERCNFYYRRKRALRRSKATCKECKPCVLDNSSGS
DNTDTDGM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgactgacagtcagagtgtgtcagacatggaggatgaagagtgctgggtccagctggag
gattacagaatgctgctgataaagaccattgagccgtcgcgaatcactccttacctgcgt
cattgtaaggtgctaagcagcgaggatgaggagcagatattcaatgaccccagtctggtc
acccgtcaacgcaaagtaggtgtactattggatattcttcaaagaactggacacaaaggc
tatgtgacattcctcgagagcttggagctggactatcctcgattgtatcgcaaaattact
ggcaaagaacctgcccgggtcttttctgtactagttgacacggtgggtgagtcaggactg
actcagttcttgatgagtgaggtcacacgtctgcagaagggcctgcaggaagaacgccgg
cgcagacaagaggccacttgggctgcagccacgcaggaggacgccttacggcagcagcag
gttaaggagagggagctgcggaagcagcaggagcgcgtgcagtgtatgagggaggagagg
gaccggcaatgggaggtggtatgccacctgaaggacgagaactacagcctgatgcacaac
gtaaccaagctgagcgaagagaagaatagtgctctcatgtccaaccgggatctgcaattg
gagatagaaaagctgaagcacagcctgatgaaggcagagagtgactcgaaaatccaacgc
aagcaaactgtgaacctgaagaatgccattgaggagagacccagtcaggacatgatttgg
cagctccagagacacaacgatctgctcacagtgcgcatccaggagctggagagctcagct
cagcaggggacagctccagcccccttggatcaagagaagctgagcgttgagagtctggag
gactacaagcagcactctcaggctcagcaccaggagctggtcaacaacatctacaaccta
cgcagagatctgcacgatgctgaggcactacggaatcggtacttggaggcgaaggaggtt
cttgagttgaagtgcacaacattaaagaaagatgcaaaaatgtatcgtgaccgaatggag
gacatcctgaaacagatggatgaggttatcagggagagagacaaggccatcgcctctcga
gaggagtaccaccaggagaattcacggagcctccaggagaaggaccagtaccggaagcag
attcgggagctgggtgagcgctgtgatgagctgcaggtccagttgttccggactgaggca
gaggttatggctctacagaccaggcttcacattaacacctgctccccacatgataaaagc
cagaccagtgaggaagactgcagagatacattaaccgaagctagtagtggggacctgcaa
tgtcagacatcgggggagtatgatgtgtgcattgctttgcaagtccacccgttgtgtgca
gaagggtccccggaggataatatctcaggagaaagagctttatcagaggatgagccctca
gactgcagcaagcccagagagaggtgtaacttctactacagaaggaaacgtgcccttagg
aggtcaaaggccacatgcaaggaatgcaaaccttgtgtcctggacaacagcagtggaagt
gacaacactgacacggatgggatgtga
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