Salmo trutta (river trout): 115164897
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Entry
115164897 CDS
T08542
Name
(RefSeq) myocyte-specific enhancer factor 2C-like isoform X1
KO
K04454
MADS-box transcription enhancer factor 2C
Organism
stru
Salmo trutta (river trout)
Pathway
stru04010
MAPK signaling pathway
stru04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
115164897
04371 Apelin signaling pathway
115164897
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115164897
Transcription factors [BR:
stru03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, MEF-2
115164897
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRF-TF
HJURP_C
Motif
Other DBs
NCBI-GeneID:
115164897
NCBI-ProteinID:
XP_029573661
Ensembl:
ENSSTUG00000036286
LinkDB
All DBs
Position
27:31409060..31518370
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AA seq
472 aa
AA seq
DB search
MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSTNKLFQYAST
DMDKVLLKYTEYNEPHESRTNSDIVETLRKKGLNGCDSPDPDADDSVGHSPESEEKYRKI
NEDIDLMISRQRLCQGVPSSNYEMPVSIPVSNQNSLIYSHPGGSLGNHNLLPLAHHMQRN
SMSPGVTHRPPSAGGLMGADLTTGAGTSAGNGYGNHHRNSPGLLVSPGSMNKSMQAKSPQ
TMNLGMNSNRKPDLRVLVPPGVKNNMPSINQRINNSQSAQSLATPVVSVATPTLPGQGMG
GYPSAMSTSYGTEYSLSSADLSSLSGFNSGSSLHLGSMSGWQQQHLQNMQQHSALSQLGN
CNSNHLCHNSNLSLPSAQSLHIKSEPVSPPRDRTSSTPGGYGVPLQQNPSSRQDSGRSPV
DSLSSCSSSHEGSDRDEHRNEFHSPLGMSRPTLDGRESPSVKRVRLSEGWAT
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggggaggaaaaagattcagatcacgcggattatggatgaacgcaacagacaggtgacg
tttacaaagaggaagtttggcctgatgaagaaggcatatgagctgagcgtgctgtgtgac
tgtgagatcgctctcatcatcttcaacagcaccaataagctgttccaatatgccagcacc
gacatggacaaggtgctgctcaagtacaccgagtacaacgagccccacgagagcaggacc
aactctgacattgtggaaacattgagaaagaagggcctaaatggctgtgacagccctgac
cccgacgcagacgactccgtcggccacagccctgaatctgaggaaaagtacaggaaaata
aacgaagacattgatctgatgatcagcagacagagactgtgtcagggtgttccctcctcc
aactacgagatgccggtgtccatccctgttagcaaccagaacagtctcatctacagccac
ccaggaggttccctaggcaaccacaacctgctgcctctggcacaccacatgcagaggaac
agcatgtcccccggtgtcacacatagacctcccagtgcaggtggcctcatgggtgctgac
ctcaccactggcgcgggcaccagtgctggcaacggctacgggaaccaccaccgtaactcg
cctggtctactggtctctccgggcagcatgaacaagagcatgcaggccaagtctccccag
accatgaacctgggaatgaacagcaaccgcaagcctgacctgcgggtgcttgttccccct
ggagtcaagaacaacatgccctccatcaaccagagaataaacaactcccagtctgcacag
tcattggccacccctgtggtttcagtagcaacgcccacactacctgggcaaggaatgggc
ggttacccatcagccatgtccacctcatacggtactgaatactcgctgagcagtgcagac
ctgtcctccctgtccggctttaacagtggtagctccctccacctgggctccatgagcgga
tggcaacagcaacacctccagaacatgcagcagcactctgccctcagtcagctaggaaat
tgcaatagcaatcacttatgtcacaattcaaatctctccctgccttctgctcaaagcctg
cacatcaagtccgaacctgtttctcctcctagagatcgcaccagcagcacaccggggggc
tacggcgtcccgctgcaacagaacccctcgtcccgccaggactcaggccgctcccctgtc
gacagcctgagtagctgcagcagctcccatgagggcagcgaccgcgacgagcacaggaac
gagttccactctccactgggaatgtcccggcccaccctggacgggcgcgagagcccctcg
gtcaaacgcgtgcgcctgtccgagggatgggccacatga
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