Salmo trutta (river trout): 115164991
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Entry
115164991 CDS
T08542
Name
(RefSeq) PDZ and LIM domain protein 5-like isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
stru
Salmo trutta (river trout)
Pathway
stru04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
115164991
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
stru04990
]
115164991
Domain-containing proteins not elsewhere classified [BR:
stru04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
115164991
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
PDZ
DUF4749
PDZ_6
LIM_FHL2-3_N
PDZ_2
Motif
Other DBs
NCBI-GeneID:
115164991
NCBI-ProteinID:
XP_029573836
Ensembl:
ENSSTUG00000036059
LinkDB
All DBs
Position
27:complement(37981641..38118911)
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AA seq
755 aa
AA seq
DB search
MSSNYSVSLLGPAPWGFRLQGGKDFNMPLTISRLTDLGKAAKARIAVGDVVLSIDGISTD
GMNHLEAQNKIKACAGNLNLTLQRASTIPKPPVAPKVEPSEIIKPVAIISHHPHHHPTEP
TSLTPSAAHNKTARPFGGCGGEDRDYPIARSPHSAFIPSASSAFTPATLARTPPIPQPLF
PFSSCSSPPSLPAAPQPSVYNTPFNLYSNENACEVAMGQRRGLTESQGGAVQLNGVPRRP
ILETDIEFYHVPSHGDASKKRLMEDTEDWRPRSGTTQSRSFRILAQITGTEHQQAQESDA
ENKTNSSPVQPLTHLSPVSAVQPLLFPKPVRYGNHTNLLYPNVLISVKSAAPFPLFYGCR
RELLLNPLEFLPRGGPCPPALTHSAPTLAIRSHSTVIGLQARTPHRSPDGTVSQSLLDAL
LITPITTLPPLRLRKKKRRSVSALHLPNNKRVSWHQSVTDLGDPNLSSPVNAVYIFSEEV
EEPETSSHMSSEVKTMTKGPAGSPNNSITFTTTQGELCSGFPKPGLQTCFGMRGNGTTSV
LSKGPVPERPAPQPHPKDQDTLVQMAEHIPAGTRTPMCGHCNMDIRGPFLVAMGKSWHPE
EFNCAHCRTSLADIGFVEEQGSVYCEHCYEDFFAPSCSRCQLKILGEVINALKQTWHIHC
FLCASCQQPIRNNTFHLEDGEPYCERDYYSLFGTGCHGCEFPIEAGDKFLEALGFTWHDT
CFVCVICCTTLEGQAFFSKMDKPLCRKHAHSVVKI
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtaactacagtgtgtccctgcttggcccggccccatggggcttcagactgcag
gggggaaaagacttcaacatgccactcaccatctccaggctcacggacctgggaaaggca
gccaaggcacgtatcgcagtgggcgatgtggtcctgtctattgatggcatcagtactgat
ggaatgaaccacctggaagctcagaacaagatcaaggcctgcgctggtaacctcaacctc
accctgcaaagagcctccaccatcccgaaacctcccgtggccccgaaggtcgagccatca
gagatcattaagcctgtggctattatcagccaccacccccaccaccatcccactgagccc
accagtctcacccccagcgccgcacacaacaaaactgcccggccctttgggggctgcggg
ggcgaggacagagactaccccatcgcacgctccccccattccgccttcattccctctgca
tcctctgccttcacccctgccaccctagcccgcactcctcctataccccagcccctcttc
cctttctcctcctgctcctcacccccctccctccctgccgcaccccagccctctgtctat
aacacgcccttcaacctctactccaacgagaacgcctgcgaggtggccatgggccagagg
cggggcctaacggagagccagggaggagccgtgcagttgaacggggttcctaggaggccc
attctggagacagacatcgagttctaccacgtgccttcccatggagacgccagcaagaag
cgcctgatggaagacacagaggactggcgtccccgcagtggcaccacccagtcccgctcc
ttccgaatcctggcccagatcaccggcactgaacaccagcaagcacaggagagcgatgcg
gagaacaagacaaactcctctccagtacagccactgacacatctttctcctgtgtctgca
gtacagccactactcttcccaaagccagtgaggtacgggaatcataccaatctactctat
cccaatgtccttatcagtgtaaagtctgctgccccctttcctctgttctatgggtgcagg
cgagagctcctgttgaacccactggagttcctccctcgagggggtccctgcccaccggcc
ctcacccatagtgcaccgactctggctatacggtcccattctactgttattggtttacag
gccagaaccccgcacaggtcacctgatgggacggtctctcagtccctattggatgccttg
ctcattacacctatcaccacccttccgcccctccgcctgaggaagaagaagcgtcggagt
gttagtgccttacacctgcccaacaacaagagagtctcctggcaccaatcagtcactgat
ctgggtgaccccaacctctcctctcctgtcaatgctgtctatatctttagtgaggaggtg
gaggagccagagaccagttctcacatgtcgtctgaggtcaagaccatgaccaaaggacct
gctggcagccccaacaactccatcacctttaccaccactcagggtgaactgtgttcaggt
ttccctaaaccaggccttcagacatgttttgggatgagggggaacggcaccaccagtgtt
ctctctaagggccctgtcccagagaggccggccccccagccccatcccaaagaccaggac
actctggtgcagatggccgaacacatccctgcagggacacgcacgcccatgtgtggccac
tgcaacatggacatcagaggcccattcctggtggccatgggaaagtcctggcaccccgaa
gagtttaactgcgcccactgccggacctccctggcagacattggcttcgtggaggagcaa
ggctcggtctactgtgaacactgctacgaggacttctttgcaccttcctgtagccgctgc
cagctgaagatcctgggggaagtgatcaacgccctgaaacagacctggcacatccattgt
ttcctgtgtgcatcgtgccagcagcccattaggaacaacacctttcacctggaggatgga
gagccctactgtgaaagagactattactccctttttggtaccggttgccatggttgcgag
ttccccatagaggcaggcgacaagttcttggaggctctgggcttcacctggcatgacacc
tgttttgtgtgtgtgatctgctgcaccactctggagggtcaagccttcttctccaaaatg
gacaagcctctgtgcaggaaacatgcacatagtgtggtgaaaatatga
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