Salmo trutta (river trout): 115165045
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Entry
115165045 CDS
T08542
Name
(RefSeq) chondroitin sulfate proteoglycan 4-like
KO
K08115
chondroitin sulfate proteoglycan 4
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
stru00535
]
115165045
04091 Lectins [BR:
stru04091
]
115165045
Proteoglycans [BR:
stru00535
]
Cell surface proteoglycans
Others
115165045
Lectins [BR:
stru04091
]
C-Type lectins
Others
115165045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Laminin_G_2
Laminin_G_1
Cadherin_4
TMEM154
DUF6479
DUF3377
Motif
Other DBs
NCBI-GeneID:
115165045
NCBI-ProteinID:
XP_029573932
LinkDB
All DBs
Position
27:43074027..43150845
Genome browser
AA seq
2425 aa
AA seq
DB search
MENMKFPIRSTKKLCFYAALLVSLTSDLAMGASFYGDGYVQLKTVESSNRNSLRVRFRTS
SPRGLLFLAAGHTDYLLVELNAGRLQVKLDLGYGERLLRSESSTQLNDLAWHTAELLHDR
YNVTLTMDQYSHTSLRMPGHGSQKQDLTIQDGLYVGGSGGLDKLYLPNDLTGFRGCVDQA
VFNENNMLSSLRPYPGFKSVYEVSLGCSPQFFAGEEDPVSFFSSRAYVSLPPWNVSHNQQ
EALFECVVHTSAKEGIVLYNSARQGDFVAVEIQEGLLVAIVVKGGTKTELKSLTFINDRN
WHSVKMFFSPKTLQLTVDKETVKTSISSRSKGLQLRGSLFVGGIDDSTRSEVRKMGLVSV
LGNRVRGGSFKGCLKDMKVNGVMMGLPNAVVTKDISVGCEPEKEPEPSTTMGPTTIPTVP
NSRFDPTSVTPTPEFPMFTLARGLDKKYGANFVLLRNLVVSEGGRGSLESKHIKVHLDFK
KLGVRQSQIMFRIQEQPVHGQIRLDVDQDQEENIFSMLDLWHGRVMYIHGGSEDPEDFFT
FSIFSSSRKVVPTYLQGTRRYRYNITVTPTNDAPELRLPQGNLFVLLENSRKLLTKEVLK
ATDIDSNHTDLVFSILGNLNPDAGYLEVGDNPDTAVTTFSHSDLEEGKVNYVHTGVRNSR
IVLRVSDGDKVSNTVVLRIMAIGLEYKIANNTGLEIIQGEVAVISNKQLAIQTNAVNQVV
DIRYDVVKPPQYGELQRLHSSGEWKPTGSFSQRLLEKERLRYLSTFQEIQTANATDYFKC
KVTVAGRVDTELVFPVTVKWVHYNLVRNVMADINKVRKVTLDSQYLYATVDVVTLSEDDL
HFRVLSSPKKGQLLLVNELLKKNSTFSQRNVTDLKVQYELVDRPYEDTSDTFKFQVFSKH
AQSQSYDFQISIKADVNSVFIRNYKLSIMEGESKLITKDELFAETLSTKELYYTVTSSPK
HGKLARINLSNSNASYNNILTFSNQDLLEERVMYIHDDTETTQDQFTFIASTSQESKSFV
ADDEVGSKEGTFNISIQLVNDEKPVRIVDKVFHVVRDGQRLLTLDDLCYHDADSDFSDGQ
LVYTRRGIPMGDLVLVNDTSLRLFQFTQKDLEEKRVLFLHRGVNSGRFVLFVSDGKHLVS
TLLDVTAHDPFLSLGNNTGLLVQKGKEVTVTTGNFSVLTNLNVRDDSEVTYKVSEPPKNG
WLYRHGNISVEFTQHDLKKGLVSYRHDDSKNLADWFSVTVKVQGHVLNARINVKVYLESH
QRPPILQHNNTFLVEESKPVKIDQSRLEVTHEDNLPSEIVFTVKVAPLHGFLRCFVEAEE
QYVGTEQIPVQTFSQEDVNAGNIQYMQTTPSQVNDTFLLDVSNGVTEVNNIRISVDIIPR
LIPLQVSNFTLREGGSKALTQEVLRVTNRHFSGLNFLYSLTEPSQNGYIEHSRYPGVPVL
SFTRRQVEQELIYYIHDSSETLEDNFTVVANDTGLRKQSSPCTVYIQVTAVNDQHPVITA
NRVLRVWVGSVTEIRSEDLDAQDEDTPPEELQVIVTPPSNGHLALKSALATPLLNFTLKH
IHLGQLLFVHSGAMSGGFNFQVNDGVNFAPRQIFSITASALVLSLEINRPLKVFPGSTTP
ITKEDLQAVTNDKSDTSNRTITFNVIRRPKLGRLVTVLADNFTVDVSSFTQTMVDQREIL
YIQSLVASVGWSAMDSMTFSVSSPPASLENETFKMDISYENAGPDRKTLLLANTGAVVTE
GDRVVIDKSKLDASNLMSKLPTPQRISHEIWFQVKSLPQHGVIVVGERNLTVEKPNFSQY
ILNKYGITYRHDDSETLHDRFVFDTWLNPKGKPAQRPLDDSQVLEEWFNITVIPVNDQPP
VLKTKAPSLSVVQGDTVALGPENLNVEDLDNPSEDIRYIVISKPNNGYLALGGSLNESVV
SFTQAQINSGKVYFVHDGSRASGVFYFSVSDGHHKPVYKLFNLEVTEITISLINNTGLAL
EQGQTSVILTQESLVAETNGKNTTVHYRITAAPRYGKILRLDDQEVSQFEQEDLRTGSLF
YHMTTLTSGQDSFEFTAFTSEANLTNQVVNITVKPLVRFGEGVRIPNGIVVKLNTGFLNA
TELASLSVSDPFFEVVSHPKYGKLVRGKPKAGKKTEPLESFSFQDVKKERLSFELNANMT
GVQELNDSLVFILKAENVPPARGEFRFTVVPYDPSLVLTTKSPILTTSSPFSQPLNQTTV
FGVGTALPSLSTSLLSTQRPSKNHQKFKGRNRWGNTNRNDSAGTDTNLGKTTLSKGDDNE
ISFVNTPVRVESYPQKTSNLTLVMLPLLAMLLLVIILVVLVLLLRRNRKRKQKPVTPKPP
PSPSPSTPPAYNGQLQRTAAVPTVTVTPLSPSSPALDRLLPSANQGLVSNSTSLLLCSWN
GVDPESSAQLIRTTPPTLQQNQYWV
NT seq
7278 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacatgaaattccctataagaagcacaaagaagctatgtttttacgcggcgttg
ttggtgtcgcttacgagcgacctggcaatgggagcctcgttctatggcgatggctatgtg
cagctgaagacagtggagtcgtcgaaccgtaactccctgcgtgttcgcttccgtacctcc
agcccccgcggcctgctcttcctcgctgccggccacacagactaccttctagtggagctg
aacgctggtcgccttcaggtgaagctggacctggggtatggtgagcggttgctgagatca
gagagcagcacccaactaaacgacctggcctggcacactgctgagctcctccacgaccgc
tataatgtcaccctaactatggaccagtactcccacaccagcctcaggatgcctgggcac
gggtctcagaagcaggatcttactatccaggacgggctgtacgtcggcgggtctggaggc
ctagacaagctctatctacccaatgacctaacaggattcagggggtgcgtggaccaggct
gttttcaacgagaacaatatgctatcgtcgttgagaccgtaccctggattcaagagtgtc
tatgaggtttctttgggctgtagtccccagttctttgccggcgaggaggatcctgttagt
ttctttagttcaagagcgtatgtctccctgccaccctggaacgtctcccacaaccagcaa
gaggcgctgtttgagtgtgtggttcacacctcggctaaagaggggattgtcttgtacaac
tcggccagacagggggactttgtggcagttgaaatccaagaggggctgctggtggccatc
gtggttaaaggaggcaccaagacagaacttaaatccctcacctttatcaatgacaggaac
tggcattcagtgaagatgttcttcagccccaagaccctccagctgacagtggacaaggag
acggtgaagactagcatcagctctcgctccaagggactccagctgagagggtcgctgttt
gtggggggcattgatgacagcacacgttcagaagtaaggaagatgggtctggtgtctgtg
ttgggaaacagagtccgaggaggttcttttaagggctgcctgaaggacatgaaagtcaat
ggggttatgatgggtctgcctaatgctgtagtcactaaagatatatcggtgggctgcgag
ccggagaaagaaccagagccctcgaccacgatgggtccaactactatcccgactgtcccc
aactcccggttcgatcccacttcggtcacccccaccccagaattccctatgttcactctg
gccagggggctggacaagaagtacggggccaacttcgtgctgctcaggaaccttgtagtc
tcagagggtgggcgtgggtctctagagtccaagcacatcaaggtgcacctggacttcaag
aagctcggggtacgccagtctcaaatcatgttccggatccaggagcagccggtgcatggt
cagatacgattggatgtggaccaggaccaagaggagaacatctttagcatgctggacctg
tggcacggcagggtgatgtacatccacggaggatcagaggacccagaagactttttcacc
ttctctatcttctcttcctccaggaaggtggttcccacatacctgcaggggacgagaagg
taccgctacaacatcacagtgacccccaccaatgacgccccagagctcagactgcctcag
gggaacctctttgtcctgttggagaattctagaaaactcctaaccaaagaggtgttgaaa
gccacagacattgacagcaaccacaccgacctggtcttctccatcctggggaacctgaac
cctgacgctggttatctggaggtgggagataaccccgacaccgcagtgaccacgttctcc
cattctgatctagaggaagggaaggtgaactatgtccacactggggtgaggaactccagg
atcgtgctgagggtcagtgatggagacaaggtgagcaacacggtggttctgaggatcatg
gccataggtttggagtataagatcgccaacaacactgggcttgagatcattcaaggtgag
gtagctgtgatcagtaacaagcaactggccattcagaccaatgctgtgaatcaagtggtg
gacatccgatatgatgtcgtcaagcctcctcagtatggggaacttcagaggcttcactcc
agcggagaatggaagcccaccggttctttctctcaaaggctactggagaaagaacgcctt
cggtacctcagcactttccaagaaatccagactgccaatgctacggattacttcaaatgc
aaggtcactgtagcaggaagagttgatactgaactggtctttccggtcacagtgaagtgg
gtacattataacctagtcaggaacgtaatggccgatattaataaagttcggaaagtgacg
ttggactcacagtatctttatgccacagtggacgttgtgacactatcagaggatgatctg
cacttcagagttctctcctcgccgaagaaaggacaacttctccttgttaacgagttattg
aagaaaaattcaactttcagccaaagaaatgtcactgatctaaaggttcaatacgaactg
gtcgacagaccatacgaagacacaagtgacacgtttaaattccaagtgttctccaagcat
gctcaatcacaaagttacgatttccagatctcaataaaagctgacgtcaacagcgtattt
ataagaaattacaaactatctataatggagggagagagtaaactcatcacaaaagacgag
ttgtttgcagagactcttagcaccaaggagttgtactacaccgttacaagtagccccaaa
catgggaagttagcacggatcaacctgtccaactctaacgccagttacaacaacatccta
acattcagcaaccaggatctcttggaggagcgcgtaatgtacatacatgacgacacggag
accactcaggatcagttcacattcatagcctccactagtcaggagtccaaatccttcgtc
gcggacgatgaagtcggatccaaagaagggacgttcaacatatccatccagctagttaat
gacgaaaagccagtgcgcattgtcgataaagttttccacgtggtaagggatgggcagcgg
ttgctaaccctggacgatctctgttaccatgacgcagactcggacttcagcgacgggcag
ttggtctacacgcgacggggaatcccgatgggagacctggttctggtaaacgacacctct
ctcaggctgttccagttcacccagaaggacctggaagagaagagagtgttgttcctccat
cgaggcgtgaactctggacgctttgtgctgttcgtgtccgacgggaaacacttagtctct
actctgctggacgtcacagcccacgacccattcctgagcctcggcaacaacacaggtctg
ttggtccagaagggaaaggaagtgaccgtaaccaccggtaacttcagcgtcctcacgaac
ctcaatgtccgtgatgacagcgaagtcacctacaaggtgtccgagcctcctaagaacggc
tggctgtatcgccacggaaacatctcagtggagtttacacagcacgacctgaagaagggc
ctcgtctcgtatcgccatgatgacagcaagaacctggcggactggttcagtgtgacggtt
aaggttcaaggtcacgtcctgaatgccagaatcaacgttaaggtttacctggagagccat
cagaggccccctatccttcagcacaacaacacctttctggtggaggagagcaaacctgtg
aagattgaccagagtagactggaggtgacccacgaggacaacctgccatctgagattgta
tttacagtgaaggtggctccgctacacgggttcctgcggtgcttcgtggaggctgaggag
cagtatgttggaactgaacagatccccgtccagaccttctcccaggaagacgtcaacgct
ggcaacatccagtacatgcagacgacccccagccaggtcaacgacacattcctattggac
gtctccaacggtgtcacagaggtcaataatatcaggatatccgtggacataatcccccgc
ctcatcccactccaggtgtccaatttcaccctgagagagggcgggtccaaggccttgaca
caggaagtgctcagggtcaccaaccgacacttctctggcctcaacttcctgtacagtttg
actgagccgtcacagaatggatatatagaacattcacgttaccccggggttcctgtgctg
tctttcaccagacgtcaggttgagcaggagttaatctactacatccatgacagcagtgag
acattagaagacaacttcaccgtggtggccaacgacacaggcctgaggaaacagagctct
ccctgcaccgtgtacatccaggtcacagccgtcaacgaccagcatccagtcatcaccgcc
aacagggtcctcagggtgtgggtggggtcggtcacagagatccgctctgaggacctggat
gcccaggatgaggacacgccccctgaggagctgcaggtgatagtgactccgccctcaaat
ggccacctggcgctgaagagtgccctcgccacgccgctcctgaacttcaccctgaaacac
atccatctgggacagctgctgttcgtccacagtggtgccatgtctggagggttcaacttc
caggtgaacgacggagtgaactttgcccctcgacagatcttcagcatcacagccagcgcc
ctggtcctcagcctggagatcaacagacctctcaaggtgttcccaggctctactacacca
atcaccaaggaggacctgcaggcggtgaccaatgacaagagcgacacatccaaccgcacc
attaccttcaacgtgattcgtcgaccaaaactaggcagactggtgacagtgctggctgat
aatttcactgttgacgtctcctccttcacacagacaatggtggaccagcgggagattctg
tacatccagagtcttgtggcgtcggttggctggtctgccatggactcaatgaccttctca
gtgtcctcacctccagcttccctggagaacgagaccttcaagatggacatctcctacgag
aatgctggacccgaccgaaagactctgctcctcgctaacacaggtgctgtggtgaccgag
ggtgaccgcgtcgtcatcgacaagtccaagctggatgcgtctaaccttatgtccaagctg
cccacgccccagcgtatctctcacgagatctggttccaggtcaagtctctacctcagcac
ggggtcattgtggtgggagagaggaacctcaccgtggagaaacccaacttctcccagtac
atcctcaacaagtatggcatcacataccggcacgacgactccgaaacgctccatgaccgc
tttgtcttcgacacctggctgaaccccaagggtaaaccggcccagcgtcctctggacgac
agccaggtgctggaggagtggttcaacatcacggtgatcccagtcaacgaccagccgccc
gttctgaagaccaaagcccccagcctgagcgtggtacagggggacacagtggccctgggg
ccggagaacctcaatgtggaagatttggacaacccttcagaggacatccggtacatcgtc
atcagcaagcccaacaacggctatctggccttgggaggaagccttaacgagtctgtggtg
tccttcactcaggctcagatcaatagtgggaaggtgtactttgtccatgatggaagccgg
gcttctggggtgttttattttagtgtttccgatggccatcacaaaccggtctataagctc
ttcaacctcgaggtgacagagatcaccatctctcttatcaacaacactgggctggctctg
gagcagggacagacctctgtgattttaacccaggagagtctggtggcagagaccaacgga
aaaaacacaacggttcactaccggatcactgctgcgccacggtatggcaagatccttcgg
ctggatgaccaggaggtcagccagtttgagcaggaggacttaaggacgggtagcttattt
tatcacatgacgaccctcacgtctggtcaggacagctttgagttcaccgcgtttacatcg
gaagctaacctgacaaaccaggttgtcaacatcacggttaagcccctggtcaggtttggc
gagggggtgagaatacccaatggcatcgtggtcaaactcaacactggtttcctcaacgca
actgagctggcttctctatccgtcagcgaccctttcttcgaggtcgtctctcatccaaag
tatggaaagctggtccgaggaaaacccaaagctggtaagaaaaccgagccactggagtct
ttctcctttcaggatgtgaagaaggagaggttatccttcgagctcaacgctaacatgact
ggagtgcaagagctgaacgactctttggtgttcattctgaaagcggagaacgtcccacct
gccaggggagagttccggttcactgtcgttccgtatgatccttcgctagtcctaaccacc
aagagtcccatcctgaccaccagcagtcctttctctcagcctctgaaccaaacgacagtg
tttggtgttgggacggcactaccctccctgtccacctccctcctttccacacagagaccc
agcaagaaccaccagaagttcaaaggtcgcaaccgctgggggaacaccaaccggaacgac
tcggcaggtacagatactaatctgggcaagaccaccctgagtaaaggagacgacaatgag
atttcctttgtgaatacaccggtccgagtagagtcataccctcagaagacctccaacctg
acattggtgatgctacctctcctggccatgctcttattggtcatcatcctggtggtgctg
gttctcctgctgcgacgcaacaggaagaggaaacagaaacctgtcaccccgaagccgcca
ccctcaccctcaccctcaaccccaccggcctataacggccagttgcagaggaccgcggct
gttcccacggtaacggtgactccactgagccccagtagccctgccctggacaggctgctt
ccttcagccaatcagggcttagttagcaactccacatcactgctactttgctcgtggaac
ggtgtagatccagagagttcagcccagctcattagaaccacaccccccactctacagcag
aaccaatactgggtatga
DBGET
integrated database retrieval system
