Salmo trutta (river trout): 115165066
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Entry
115165066 CDS
T08542
Name
(RefSeq) zinc finger RNA-binding protein-like isoform X1
KO
K13203
zinc finger RNA-binding protein
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
stru03041
]
115165066
Spliceosome [BR:
stru03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
115165066
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DZF_N
DZF_C
zf-met
zf-C2H2_jaz
zf-U1
Motif
Other DBs
NCBI-GeneID:
115165066
NCBI-ProteinID:
XP_029573960
Ensembl:
ENSSTUG00000010030
LinkDB
All DBs
Position
27:45513876..45558131
Genome browser
AA seq
1139 aa
AA seq
DB search
MIPICPVVSFTYVPSRLGEDAKMATGNYFGFTHGGAAQYSQQPAAGVAYTHPTTVASYTV
HQAPMAAHSVAAAYAPTGAAVAVARPAPVAVAAAATAAAYGGYQPAHATADYGYARQPDV
PPPPPPVTSQNYQVGYQDSYSYVRSTAPAVTYDPKQYYQQPVASSAVAAAVAVQPQPSAE
SYYQTWDATWKKSLPAPKTGYTQASLTPYTQTQQSRQVTAIKPVTPSPASSTFSIYPVST
VQPVAAVASVVPSYSQSPTYSTNAVTYSGKHDMQAVTSMHYLPTTYSTNAVTYSQSPTYS
TNPVAYSGTSYSGYEAAVYSAASTYYQQQQQQQKQAVAAVAASAAWTGSSFTKKPPFQSK
QLKPKQPPKPPQIHYCDVCKISCAGPQTYKEHLEGQKHKKKEVALKVSQSSSSSSSGGGS
ASARGTQNQLRCELCDVSCTGADAYAAHIRGAKHQKVVKLHTKLGKPIPSTEPSVVTQTS
TTSTTASSKTPASSSTTPTGSTSNSSYLKPVSIVSQGGAGAGLGKGLVGNNLSAASATTA
VKKVNTPKINFVGGNKLHTTGKVTEEAKVETSKPPPPSLVPQPQETKNESSDLLSTLAAL
QNDVQPVGHDYVEEVRNDEGKVIRFHCKLCECSFNDPNAKEMHLKGRRHRLQYKKKVNPE
LQVEVKPSIRARKIQEEKMRKQMQKEEYWRRREEEERWRMEMRYGEIGRYEEEMYWRRME
EQHHWDERRGGPRMPGDGPYLQGPPGPPGLLGVRPGMPIPQPQGPVPPRRPDSSDDRYVM
TKHATIYPSEDELQAIQKIVSVTERALKLVSDIIIDQDKTKETTGDDKDTKEVPKIPQDR
ALKGVMRVGVLAKGLLLCGDNNVNLVLLCSEKPTKNLLSRIVEHLPKQLVLVTPEKYEVT
GSVEECSIILTSGADPKMTVTVTLTSPSIREEETPATPPPRDGDVTWGLVRDPEDVLDRL
KCLDALAALRHAKWFQARANGLQSCVIVIRILRDLCQRVPTWSAFPCWAMELLVEKVINS
ASGPLSPGDALRRVFECISSGILLPGGPGLVDPCEKNPTDTLTAMEEQHREDITSSAQFA
LRLLAFRQIHKVLGMDPLPQMNPRFNVRNNRKRRRDNSDGTDGFEGEGKKDKKDFDSSY
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atgattcctatatgtccagtggtctccttcacctatgtgcccagccggcttggtgaagat
gccaaaatggctaccggcaactactttggatttacccacggtggtgctgcacagtacagt
cagcagccagctgcaggggtggcctacacccaccctaccaccgtggccagctacaccgta
caccaggcaccgatggcggcccactccgtggcagcagcctacgcgcccaccggcgccgcg
gtcgccgtagccaggcctgcccctgtcgccgtggcagcagcagccaccgccgcagcctac
ggaggttaccagccggcgcacgccaccgctgactacggctatgcacgccagccggacgtc
cccccgccgcccccccctgtcacgtcccagaactaccaggtaggataccaggactcctac
tcctacgtacggtccacggccccggcggtaacctacgaccctaagcagtactaccagcaa
cccgtagctagctctgcggtagccgctgcggtagccgtacagccccaacccagtgccgag
tcgtactaccagacctgggacgccacgtggaagaaatcccttccagcacctaagacaggc
tacacccaggccagtctgaccccttacacccagacccaacagtctcgacaggtgacggcc
atcaagcccgttactccctcccccgcctcttccacgttctccatttaccccgtgtccacc
gttcagcccgtagccgccgtggcctccgtcgtcccttcctactctcagagccccacctac
tccaccaacgcggtcacgtactctggtaagcacgacatgcaagccgtaaccagcatgcac
tacctgccgactacctactccaccaacgcggtcacgtactcccagagccccacgtatagt
accaaccccgtcgcatactccggtacgtcgtactcgggctatgaagcagcggtgtactcg
gctgcctctacctactaccagcagcagcagcagcagcagaaacaggctgttgcggcggta
gctgcttcagcagcatggacaggcagctccttcaccaagaaacctcccttccagagtaag
cagctgaaacccaagcagcctcccaaaccaccacaaatccactactgtgatgtctgcaag
atcagctgtgctggaccccagacctacaaggagcacctggaaggccagaagcacaagaag
aaggaggtggccctgaaagtctcccagagcagcagcagtagtagtagtggtggaggatca
gcatcagcccgggggactcagaaccagctccgctgtgagctctgcgatgtgtcctgtact
ggggctgatgcgtacgctgcacacatcagaggggccaaacaccagaaggtggtgaagctc
cacaccaagctggggaagcccatcccttccacagagcccagtgtagtaacccagacctcc
accacctctaccacggcctcgtccaagacccctgcctcctcctcaaccacccccacaggc
tccacctccaactcctcctacctgaagccggttagcatcgttagccagggtggcgcgggg
gccggactggggaagggtctagtggggaacaacctatcagcagccagtgccaccacagct
gtcaagaaggtcaacactcccaagatcaactttgtcggaggaaacaagctccacactacc
gggaaggtgacagaggaagccaaggtggagacatccaagcctcctccgccctcattggtc
ccccaacctcaggagactaagaacgagtcctctgatttgctgtctaccctggccgctttg
cagaatgacgtgcagcctgttggacacgactatgtggaagaggtgcgtaacgacgaaggc
aaggtgatccggttccactgtaagctgtgtgaatgtagcttcaacgatcccaacgccaaa
gagatgcatctgaagggcaggagacaccgcctgcagtataagaaaaaggtgaacccggag
ctacaggtggaggtgaagccttcgatcagagccaggaagatccaggaagagaagatgagg
aaacagatgcagaaggaagagtactggaggaggagagaggaggaggagagatggaggatg
gagatgaggtacggagagatagggcgttacgaggaggagatgtactggcgtcgtatggag
gagcaacaccactgggacgagagacgtggggggcccaggatgccaggggacggaccttac
ctccaagggccccctggcccacctggactactgggggttcggcctggcatgcccatccct
cagccacagggaccagtacctccccgtcggccggactcctcagacgaccgttacgtgatg
acgaagcacgccaccatctacccctctgaggacgagctgcaggccatccagaagatcgtc
tccgtcacagagagagccctcaaactggtctcagacatcatcatcgaccaggacaagacc
aaggagaccactggagacgacaaggatacaaaagaggtccccaagattccccaagaccga
gctctgaagggggtgatgagggtgggtgtgctggctaaaggactgctgctctgtggagac
aacaacgtcaacctggtcctgctctgctcagagaaacccaccaagaacctgctgagccgc
atagtggaacaccttcccaaacagctggtgctggtgaccccagagaagtacgaggtgacg
ggttccgtcgaggagtgttccatcatcctaacgtctggcgccgaccccaaaatgacagtc
acggtcaccctgacgtcccccagcatccgagaggaggagaccccagccacacccccgcca
cgggacggagatgtaacctggggcttggtgcgagacccagaggacgtcttggacaggcta
aaatgccttgacgctctagcggctctgcgccacgctaagtggtttcaggctagggcgaac
ggactccagtcctgtgtgattgttatccgtatcctgcgtgacctctgtcagagagtcccc
acgtggtctgccttcccctgctgggccatggagctgctggtagagaaggtgattaacagt
gcctctggtcccctgagcccaggcgatgcactgagacgagtgtttgaatgtatttcctct
gggattctgctccccggtggcccgggattggtcgacccgtgtgagaagaaccccactgat
accctaacagccatggaagagcagcacagagaggacatcacgtcaagtgcccagtttgct
ctgcggctgctggcgttccgtcagatccacaaggtgctgggcatggacccactgcctcag
atgaacccccgcttcaacgtccgcaacaaccgtaagcgtcgccgcgacaacagcgacgga
acggacggattcgagggcgaagggaagaaggacaagaaggatttcgacagtagctactag
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