Salmo trutta (river trout): 115165112
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Entry
115165112 CDS
T08542
Name
(RefSeq) WD repeat and FYVE domain-containing protein 3
KO
K22262
WD repeat and FYVE domain-containing protein 3
Organism
stru
Salmo trutta (river trout)
Pathway
stru04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
115165112
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115165112
Membrane trafficking [BR:
stru04131
]
Autophagy
Aggrephagy
Scaffold proteins
115165112
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beach
Beta-prop_WDR3_1st
FYVE
Beta-prop_IFT122_1st
Beta-prop_WDR5
WD40
WD40_CDC20-Fz
PH_BEACH
NBCH_WD40
WD40_Prp19
Beta-prop_TEP1_2nd
Beta-prop_THOC3
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_EML
WDR55
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_VPS8
TRM82_WD
Beta-prop_IFT140_1st
DUF4704
Beta-prop_EML_2
PAC11
EIF3I
Beta-prop_TEP1_C
Beta-prop_WDR36-Utp21_1st
Beta-prop_SPT8
Beta-prop_WDR36-Utp21_2nd
Beta-prop_DCAF4
WD40_MABP1-WDR62_2nd
DUF4800
Beta-prop_WDR41
ASA1
Beta-prop_SCAP
CFAP251_N
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
115165112
NCBI-ProteinID:
XP_029574007
LinkDB
All DBs
Position
27:complement(42828067..43019728)
Genome browser
AA seq
2811 aa
AA seq
DB search
MLTGHLEKNSRAGFGLAKPLKMNMVKRIMGRPRQEECSPQDNALGLMHLRRLFSELCHPP
RQMTQKEQEDKLYMMLPVFNRVFGNASPTTMTEKFQDLLQFTTQVSRLMVTEIRRRASNK
STEEASRAIVQFLEVNQSEEASRGWMLLTTINLLASSGQKTVDCMTTMSVPSTLVKCLYL
FFDLPHMAEAPGATETPELPLADRRALLQKILVKLCSFVSPAEELTQKDDLQLLFSAITS
WCPPHNLPWRKSAGQVLTTISRHGLSVNVVKYIHEKECLATCIQNMQQSDDLSPLEIVEM
FAGLSCFLKDSSDVSQTLLDDFRMSQGYTFLCDLMLRLEQTKEEDSSDALKDLVSLVTCL
TTYGVTELKPAGLTTGAPFLLPGFVLPQPSGKGHTVRNLQSFAVLQNAFLRAKTSLLTST
LLDAIGNIYAADHANYFILEAQHTLSQFADKVAKLPDAQEKYFDLLEFVVFSLNYVPCKE
LFSVSVLLKGSTSYTCSITATRTLLKLSRHDAVFSDVLREVGLLEVLVNLLHKYAALLKD
PATQQQLQNNGQGDCSSSVAEEQRQLAWLVMETLTVLLQGSNTNAGKDSKTGELPYPVAL
VPEEKVSFSLYALSVSALTVAKIRKVYNKLDSKAIAKQLAVSSHENATPVKLIHNATSHL
NGPARTIGAAVIGYLGVRAFVPKPVATNLQYVGGAAAILGLVAMAQDVEGLYAAVKALVC
VVKSNPLASKEMERIKGYQLLAMLLKKKRHLLNSHILHLTFSLVGTVDSSHETSIIPNTT
AFQDLLCDFEVWLHAPYELHLSLFEHFIELLTESSEATNNAKLLREFQLIPKLLLTLRNT
SLSQPTISAISHVLSLLLQGFPNPYHLLRFGQFISSTLPTFAVCEKFVVMEINNEEKIDG
GNDDDFGGLLSANLILLRNRLLDILLKLLFTTKEKCIVNAQACEELVRTLGFDWLLMFME
EHLHSSSVTAALWILVVLLSNQPILTKFKEGLTGGGWLDHTDSVLTNKIGTVLGFNVGRS
AGGHSTLREINRDACHFPGFPVLQTLLPKHTNVPELYFLLMTLFLQQPVTELPDSLQFDL
DSIWTFIFGVPASNSTVVGSIHTVCTEAGFLLLGMLRSMLNLPWQSEEEGSWLREYPVTL
MQFFRYLYHNVPDLAHMWHSPEFLCVLAASVFPFNIRPYSEMVSDLDNEAGSPTEEFKAF
SADTCMNRSQSEYCNVGSKTYLTNHPAKKYVFDFMKVLIMDNLCLTPASKQTSTVDLLLE
ASPERSTRTQQKEFQSYILDSVMEHLLAADVLLSEDASLLIISGGSYQVLTNNVFYFTQR
VVDKLWQGMFNKESKMVVEFIVQLIGQSKRRSQGLSLESIYHCLNRTVLYQLSRPHKTVP
QQVALLDSLRVLTVNRNLVLGPGNHDQEFVACLAHCFINLHVGSSVEGFGLEAEARMTTW
HVMMPAENEPDDTHSQDVSEGRQLLLKAVNRVWTELMHSKRPMLEDIFKVSLPTNDRGHV
DISTARPALEEPALKSWQNHLVHERKCISRGESVAPASQSKLSRVSSGFGLSKLTGARRN
KKENSLNKNNLSAQETFQWMFTHIAVVRDLVAMQYKEYQERQQNVLKYVTEEWSSIEYEL
LRERGLWGPPIGSHLDKFLLEMTEGPCRMRKKMVRNDMFYIHYPYVPEPEPSTNGQVQKP
VRYRRAISYDSKEYYMRLLSGNPGMYQHSVEQDTEGETTRQEPGEVHGEDTIARVRGLVK
APLKRSRSTADRADEEQDLLQEQLLESGGLDEEQRTDNTSLLRLLEEGEQIQHMYRCARV
QGLDTSEGLLLFGKEHFYVIDGFTMTVSREIRDIETLPANLHETIIPRGARQGQSQLKRT
CSIFAYEDIKEVHKRRYLLQPMAVEVFSGDGRNYLLAFQKGVRNKVYQRFLAVVPSLADS
SESVSGQRPNTSVEQGSGLLSTLVGEKSVTQRWERGEISNFQYLMHLNTLAGRSYNDLMQ
YPVFPWILADYDSEELDLNNPQTFRNLAKPMGAQTDDRLTQYKKRFKDWEDPTSETPAYH
YGTHYSSAMIVASYLVRMEPFTQIFLRLQGGHFDLADRMFHSVREAWLSAAKHNMADVKE
LIPEFFYLPEFMLNSNNFDLGAKQNGIRLRDVLLPPWAKGDPREFIRVHRQALECDFVSA
HLHEWIDLIFGFKQQGPPAVEAVNVFHHLFYEGQVDIYNINDPLKETATIGFINNFGQIP
KQLFKKPHPTKRVRSKSNGEMAVGLPVSLSSTTDKIFFHHLDNLRPSLAPVKELKEPVGQ
IVCTEKGILAVEQNKVLQPPVWNKTFAWGYADLSCRLANYESDKAVVVYECLSEWGQILC
AICPNPKLVVTGGTSTAICVWETGASKERAKTLTLKQALLGHTDAVTCLTASSAYHILVS
GSRDRTCIIWDLNKLSFVTQLRGHRAPVSALCINELTGDIVSSAGTYIHVWSINGSPIAS
ANTFTGRSQQILCCCVSEMNEWDTQNVIVTGHTDGVVRFWRMEFLQVPETPAPVPIEPPD
VPDCCTEDKLAVGPETHNADDDSSESDGDEPRLSKESKPSPRPYAAAGGGAGSVEGGPGS
QPGSTVHRPKVPGGPGIIWSVDSGSDDLSLDEKDGFVFVNYSEGQTGRTQTPSKPEVLPP
HPVAGHGGVPQPVHPTTMEARPYNQLRAGYRWERQLVFRSKLTMHTAFNRKDNAHPAEIT
SLAISKDHSKILVGDGRGRVFSWSVSDQPGRSAADHWVKDEVVDSCSGCSVRFSLTERRH
HCRNCGQLFCQKCSRFQSEIQRLKISSPVRVCQDCYCNLQHERSAEDGCRN
NT seq
8436 nt
NT seq
+upstream
nt +downstream
nt
atgctgacaggacacctggagaagaacagtagggctggctttggcctggcgaagccgctc
aagatgaacatggtaaagaggatcatgggaaggccgcgccaggaagaatgtagcccccag
gacaacgcgctgggcctcatgcacctccgacgtctcttctctgagctctgccatccgcca
cgtcaaatgacccagaaggagcaggaggacaaactctacatgatgttacccgtcttcaac
agggtgtttgggaacgcttcccccacaaccatgacagagaagttccaggacctcctccag
ttcactacccaggtgtcccggctcatggtcactgagatcagacggagagcttccaacaag
tctacagaggaagccagtagagccatagtccagttcctggaggtgaaccagagtgaagag
gcgtcacgtggctggatgctactgaccaccatcaacctgctagcatcctccggacagaaa
acggtggactgtatgaccaccatgtcggtgccctctaccctggtgaagtgtctgtatctg
ttctttgaccttcctcacatggcagaggcccctggggccacagaaacccctgagctgcca
ctagctgaccgccgggccttgctacagaagatcctggtgaagctgtgtagctttgtatcc
cctgcggaggagttgactcagaaagacgacctgcagcttctcttctccgccatcacgtcc
tggtgcccccctcacaacctgccctggaggaagagcgccggccaggtcctcaccaccatc
tcacgacacggtctcagcgtcaacgttgtcaaatacatccacgagaaagaatgcctggcc
acgtgtatccagaacatgcagcagtcagatgacctttcacctttagagatcgtagagatg
tttgctggtctgtcctgcttcctgaaggactccagcgacgtctctcagaccctgctggac
gacttcaggatgagtcagggatacacgttcctctgtgacctcatgctcagattggagcag
accaaagaggaggacagcagtgatgctctgaaggacctggtcagtctggtcacatgtcta
accacctatggcgtgacagagctcaaaccggccggtctaaccactggagctcccttcctc
ctgcctggcttcgtactcccacagccttctgggaaaggccacacggtgaggaacctccag
tcgttcgccgtcctacagaatgccttcctgagggctaagacctcactgctgacctccacg
ctgctggacgccatcggcaacatctacgctgccgaccacgccaactacttcatccttgaa
gcgcagcacacgctctcacagttcgctgacaaggtggccaagctgccagatgcccaggag
aaatactttgacctgttggagtttgtagtgttcagtctgaactatgttccctgtaaggag
ctgttcagtgtcagcgttctgctgaagggctccacgtcctacacctgcagtatcacagct
accaggactctgctgaagttgagtcgtcatgacgcagtgttcagtgatgtgttgagggag
gtggggctactggaggtgctggttaacctcctgcataaatacgctgccctgctcaaagac
cccgcaacgcaacaacagctacaaaacaacggccaaggtgactgcagcagcagtgtagcg
gaggaacagagacagttggcctggctggtcatggagactctgactgtcctgctacaaggc
tccaacaccaatgcaggtaaagactctaagactggagagcttccatacccagtcgccctg
gtcccagaggagaaggtatccttcagcctgtacgccctctctgtctctgccctcaccgtg
gccaagatacgcaaggtctacaacaagctggacagcaaggccatcgctaaacagttggct
gtgtcatcccatgagaatgccactccggtcaagctgatccacaacgccaccagtcatctc
aacggtccggctcgcaccattggagcagctgtcattggttacctgggtgtgcgtgcgttc
gtcccgaagcccgtggcaaccaatctgcagtatgtgggtggggcggcggccatcttgggc
ctggttgccatggcacaggatgttgagggtctctacgcggctgtcaaggcgctggtgtgt
gtcgtcaagagcaacccgctggccagtaaggaaatggaacgcatcaaaggctaccagctc
ttagccatgctgttgaagaagaagcggcacctgctgaacagccacatcctgcatctaacc
ttctccctggtgggaacagtagacagcagccacgagacctccatcatccccaacaccacc
gccttccaggacctgctctgtgacttcgaggtttggctccacgcgccctacgagctgcac
ctttccctgtttgaacactttatagagcttctcactgagtccagtgaggcaacgaacaac
gctaagttgttacgtgagttccagctgattcccaagctactgctgactctgagaaacacg
tctctgtctcagcccaccatctcagctatcagtcacgtgctgagtctactgctgcagggc
ttccccaacccctaccacctgctacggtttggccagttcatctcatccactctgccaacc
tttgctgtgtgtgagaagtttgtagtgatggagatcaacaacgaggagaagatcgatgga
ggtaacgatgacgactttgggggtcttctatcggccaacctcatcctgttgaggaacaga
ctgctggacatcctcctcaaactgctgttcaccaccaaggagaagtgcatcgtcaacgca
caggcttgtgaggagttggtgcgtaccctgggatttgactggctgttgatgttcatggaa
gagcacctccactccagcagtgtgacagcagctctgtggatcctagtggttctgctcagt
aaccagcccatactgaccaagtttaaagaagggttgactggaggaggatggttggaccac
actgactctgtcctcaccaacaagatcggcaccgtactgggcttcaatgtgggccgtagt
gccggcgggcactccaccctacgggagatcaaccgagatgcctgccatttcccagggttc
cctgttctgcagacgttgctgccgaaacataccaacgtccccgagctctacttcctgctg
atgaccctgttcctgcaacaacccgtcacagagctgccagacagcctccagtttgacctg
gactccatctggacctttatcttcggcgttcctgcctccaacagcactgtagtgggatct
atccacactgtctgcaccgaagctggcttcctgttactgggcatgctgaggagcatgctt
aacctgccctggcagtctgaagaggaggggtcatggttgagagagtatccggtaactctg
atgcagttcttcaggtacctgtatcacaatgtcccggacctggcccacatgtggcacagc
ccggagttcctgtgtgtcctggctgcctcagtcttccccttcaatatcagaccctactca
gagatggtgagtgacctggataatgaagcggggtctcccacagaggagttcaaggccttc
tccgccgacacgtgcatgaaccgtagccaatcagaatactgcaacgtgggcagtaagacc
tacctgaccaatcacccggccaagaagtacgtgtttgacttcatgaaggtgctgatcatg
gacaacctgtgtctgacaccagccagcaagcagacgtccaccgtagacctactgctagag
gcgtccccagagcgctccaccaggactcagcagaaagaattccagtcatacatcctggac
tctgtcatggaacacctactggctgctgacgtcctcctaagtgaggatgcatccctactc
atcatcagtggtgggagctaccaggtgctgaccaacaacgtgttctacttcacacagcgc
gtggtggacaagctgtggcagggcatgttcaacaaggagtccaagatggtggtggagttt
atagtgcagcttataggacagtccaagaggcgttcgcagggtttgtctctggaatcaatc
taccactgtctgaaccgcacggtcttgtaccagctgtctcgaccgcacaagaccgtacct
cagcaggtagctctgctggactctctacgggtgttgaccgtcaatcgtaacctggtgctg
ggaccaggcaaccacgaccaggagtttgtagcctgtctggctcactgcttcatcaacctg
cacgttgggagtagtgtggagggttttggtttggaagcagaggctcgtatgacaacctgg
cacgtcatgatgcccgctgagaatgaacctgatgacacacacagccaggatgtcagcgaa
ggtcgccagctgctgctgaaggcagtaaaccgtgtgtggacagagctgatgcacagtaaa
agacccatgttggaggacatctttaaggtgtccctccccaccaacgacagaggacatgta
gatatcagcactgctcggcctgccctggaggaaccagccctgaagagctggcagaaccac
ctggtccatgagaggaagtgtattagcagaggtgagtcagtggctccggccagccagtcc
aagctgtcccgggttagtagtggttttggtctgtccaagctgaccggcgctcgacgcaac
aagaaggaaaactccctgaacaagaacaacctgtctgcacaggagacgttccagtggatg
ttcacccacatagcggtggtcagggacctggtggccatgcagtataaagagtaccaggag
aggcagcagaatgttctaaagtacgtgaccgaggagtggtcgtctatagagtatgagctg
ctgagagagcggggcctttgggggccccccatcggatcccacctggacaagttcctgctg
gagatgactgaggggccctgtcgcatgaggaagaagatggtccgcaacgacatgttctac
atacattatccgtacgtccccgagcctgaacccagcactaacggccaagtacagaagccg
gtgcgttaccgccgagcgatcagctacgacagtaaggagtactacatgagactgctgtca
gggaaccctgggatgtaccagcactccgtagagcaggacactgagggagagaccactcgg
caggaacctggagaggtgcacggagaggacaccatcgccagagtcagaggtctggtgaag
gcccctctgaagaggtctcgctccacggcagacagagccgatgaggaacaagacctgctg
caggaacagctcttagagtcaggaggtctggacgaggaacagaggacagacaacacatca
ctgctacgactactggaggagggagagcagatccaacacatgtatcggtgtgcgcgggtg
cagggtctggacactagcgaggggctgctgctgtttgggaaggaacacttctatgtcatc
gacggtttcaccatgaccgtctccagagagatcagagacatcgagacgctgcccgccaat
ctgcatgagaccatcatccccagaggcgcgaggcagggtcagagccagctgaagaggacc
tgcagtatctttgcctacgaggatatcaaggaggtccacaagaggcgatacctgttgcag
cccatggctgtggaggtgttctcaggagatgggaggaactacctgctggccttccagaaa
ggagtccgcaacaaggtgtaccagaggttcctagcagtggttccctctctggctgacagc
tcagagtcagtctcaggacaaaggcccaacaccagtgtagagcaagggtctgggctcctc
agcactctggtaggagagaaatctgtcacccagagatgggagcgcggagagatcagtaac
ttccagtatctgatgcatctcaacaccctggctggtcgctcctacaacgacctgatgcag
taccctgtcttcccctggatcctggctgactacgactctgaggagttggacctgaacaat
ccacagacgttccggaacctggctaaaccaatgggagcccagacagatgacaggctgacc
cagtacaagaagaggttcaaggactgggaggacccgaccagtgagaccccagcgtatcat
tacggtacacactactcctcagctatgattgtggcttcctacctggtccgcatggagcca
tttactcagattttcctcaggcttcagggaggtcactttgacctggctgacaggatgttc
cacagcgtgcgtgaggcctggctttctgccgccaaacacaacatggccgatgtcaaggag
ctcatcccagagttcttctacctgccagagttcatgctcaactccaacaactttgaccta
ggtgccaaacagaatggtattagactaagagatgtccttctgcctccgtgggccaaggga
gacccccgagagttcatcagagtacatcgacaggctctggagtgtgacttcgtcagtgcc
cacctccatgagtggatcgacctgatctttggcttcaagcagcagggtcctccggcggtg
gaggcggtcaacgttttccaccacctgttctacgagggccaggtggacatctacaacatc
aacgaccccctcaaggagaccgccaccatcgggttcatcaacaacttcggacaaatcccc
aaacagttgtttaagaagccccaccctacgaagcgtgtacgtagtaagtctaatggggag
atggcggtgggtttgcccgtctctctctcctcaaccaccgacaagatcttcttccatcac
ctggacaacctcagaccctcactagcccccgtcaaagagctgaaggagcctgtgggtcag
atagtgtgtactgagaagggcattctggctgtggagcagaataaagtcctacagcctcct
gtctggaacaagacctttgcctggggttatgcagacctctcctgcagactggccaactat
gagtcagacaaggcggtggtggtgtatgagtgtctgtcagaatggggtcagatcctgtgc
gccatctgccccaaccccaagctggtcgtcaccgggggaaccagcactgccatctgtgtc
tgggagacgggcgcatccaaggagagggccaagaccctcacactcaaacaggcgttgctg
ggccatacagacgcagtgacttgtctgacagcctcgtcagcgtaccacatcctggtgtct
ggctctagagacaggacttgtatcatctgggacctcaacaaactgtccttcgtcacacag
ctcagaggacacagggcccccgtctccgccctctgcatcaacgaactcacgggagacata
gtgtcttcggcagggacctacatccatgtgtggagcataaacggcagtcccatagccagt
gccaacaccttcacaggccgctcacaacagatcctctgctgctgcgtgtcagagatgaac
gaatgggacacgcagaacgtcatcgtcaccggacacaccgacggcgtcgtcaggttctgg
aggatggagttcctacaagtcccagaaacccctgctccagtgcccattgaacctcctgat
gtacctgactgctgtacggaggacaagctggcagtgggaccggagacccacaacgctgat
gacgacagcagcgaatcagacggagacgagcccagactcagcaaggagtccaaaccctcc
cctcgcccctacgccgcagcggggggaggagctggatcggtagagggaggaccaggcagc
caaccaggcagcaccgtccacagaccgaaagttcctggaggaccgggaatcatctggtct
gtagatagtgggtcagacgacctcagcctggacgagaaggacggctttgtgttcgtcaac
tactcagagggtcagacaggacgaacacagacaccttccaagccggaggtcctccctccc
caccccgtagcaggccatgggggggtcccccagcccgtacaccctaccaccatggaggct
cggccctataaccagctcagagcaggctacagatgggagcgacagctggtgttccgtagt
aaactgaccatgcacactgcattcaaccggaaggacaacgctcacccagccgagatcaca
tccctcgccatctccaaggaccacagtaagatcctggtgggtgatggtcgtggcagggtg
ttcagctggtcggtgagcgaccagcctggtcgttctgctgctgaccactgggtgaaggac
gaggtggtggacagctgttcaggctgtagcgtgcgcttctccctcacagaaagacgtcac
cactgcaggaactgtggacaactcttctgtcagaagtgtagtcgtttccagtctgagatc
cagcgtctgaagatctcatccccggtgagggtctgtcaggactgttactgcaacctgcag
cacgaacgcagcgctgaggacggatgtcgaaactaa
DBGET
integrated database retrieval system
