Salmo trutta (river trout): 115165113
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Entry
115165113 CDS
T08542
Name
(RefSeq) integrin alpha-2-like
KO
K06481
integrin alpha 2
Organism
stru
Salmo trutta (river trout)
Pathway
stru03271
Virion - Rotavirus
stru04145
Phagosome
stru04510
Focal adhesion
stru04512
ECM-receptor interaction
stru04810
Regulation of actin cytoskeleton
stru04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
115165113
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115165113
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
115165113
09144 Cellular community - eukaryotes
04510 Focal adhesion
115165113
09142 Cell motility
04820 Cytoskeleton in muscle cells
115165113
04810 Regulation of actin cytoskeleton
115165113
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
stru04147
]
115165113
04515 Cell adhesion molecules [BR:
stru04515
]
115165113
04090 CD molecules [BR:
stru04090
]
115165113
Exosome [BR:
stru04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
115165113
Exosomal proteins of bladder cancer cells
115165113
Cell adhesion molecules [BR:
stru04515
]
Integrins
Integrin alpha subunits
115165113
CD molecules [BR:
stru04090
]
Proteins
115165113
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_2
Integrin_A_Ig_1
Integrin_A_Ig_3
VWA_2
FG-GAP_3
Integrin_alpha
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
115165113
NCBI-ProteinID:
XP_029574008
LinkDB
All DBs
Position
27:complement(43610263..43650431)
Genome browser
AA seq
1182 aa
AA seq
DB search
MNSDTNWEPDVHTVWYSEAFNVGTADAKVFSGPANEQFGYTVQQLTNHQGKWLLVGAPWS
GFTDNRKGDVYKCPVSGSKTSCDKLNIQDSINIPDERNINVNMSLGLTLTRMPKISGFMT
CGPLWAQRCGSQDFCPGVCAGVSPLFKPHSAFSPAVQTCGGPMDIVIVLDGSNSIYPWTP
INEFLKKLLPTLDIGPQSTQVSVIQYAVSAQFEFKLNTFKTKEGVLSAASGITQMYGAAT
NTFHAIQYASRWGFHQDNGGRPGAAKVMVVVTDGESHDEAFRDTVIRECEKENIRRFGIA
VLGYYIRNNIDTKNLIAEIKSIASLPTENYFFNVSEEATLSSIAEALGDRIFNIEGTGKG
GEDFQMQMSQVGFSAHYSSKMDVMMLGAVGAYAWSGTVVHQRGGQRADIFPLSAFERTLQ
DRNHSSLLGYSVTTLSDGQTEYFVAGAPRSNHSGQVIVYTVTSSKQVTVIDSEREKQIGS
YFGSVLCPLDVDKDGTSDVLLVGAPMFMNDLKKEQGRVYLFSVTKGILSEQGFLVGLSPG
ENARFGTAISAVPDLDQDGFCDVVVGAPLEDSGRGVVYVYNGDKKTLHKQHSQRILGSKF
DFMMQYFGRSLDGYGDMNDDTIPDISVGAHGKVIQLWSRGLAAVTAKASFSPDKINILSK
PCLINGQKLSCFKTDICFSATFRPKKPVGPLTVKYNLTLDADLQSSRVSSRGLFSQNRER
LLSGNVQISSSTTSVCHNYQVYVQESADFVNSISLRVDIGLQNPDANPVLDVFSQTAWDF
SIPFSKQCGSDDVCVSDLVLSVKKVTEVPSVGSVLVSSNNREISFEVLVKNIKENAYNTQ
ILVTYSKSLFYASITSPSDGKEVKCTSTTQSDVLACQVGYPALEKDEEVKFWFNFDFNLN
HLQSQARVHFQAKSAGKEESPADNTVDITIPVRYDAEIIMTRESNINFYVVDEAKEVQTS
VKTLDDIGPEFNFSLKISTGNFPVRLLYLTISVPVTTRGGNPLIYVTGLDTPTGDSVSCD
SALVDPLKIGSKPHTALFSKESLRGIHRLDCWNVKCQAIKCVIKDMRVKSVYFVNVTTRI
WNGTLASATFQTIELITNTEIVTSQPDLLIITHKTMPVGVTVSKPGETADVPVGVIVGSV
IGGLLLLALVVGLLWKFGFFKRKYQQLRERTEYSEEPQENGP
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atgaacagtgatacgaactgggagcctgacgtgcacacggtttggtactctgaagccttc
aatgtgggaaccgcagacgccaaggtcttctctgggcctgctaacgaacagtttggttac
actgtccaacaactaaccaaccatcaaggcaaatggctcctggtgggcgctccatggagt
ggcttcactgataacaggaagggagatgtttataaatgtcctgtgtcaggctctaagacc
agctgtgataagctcaacatccaggactccatcaatattccagatgagagaaatatcaac
gtcaacatgagtctaggtttgactctcactcgtatgcccaaaattagtggatttatgaca
tgtggtccgctgtgggctcagagatgtggtagtcaggacttctgcccaggtgtctgtgca
ggggtcagccccctcttcaaacctcattctgccttctcccctgctgtacaaacttgtggg
ggtccgatggatattgtgatagtcttggatggctccaacagcatttacccatggacacca
attaacgagtttctcaaaaaactgctccctactctagacattggcccacaaagtacccag
gtcagtgttattcagtatgcggtgtcagcacagtttgaattcaaactgaacactttcaaa
accaaagaaggtgttttgtctgcggcctcgggtatcactcagatgtacggtgctgctacc
aacacttttcatgccatccagtacgccagtcggtggggttttcatcaagacaatggcggt
cgtcccggggcagccaaggtgatggttgtggtaaccgacggggagtcacatgacgaggcc
ttcagagatacagtcatcagagaatgtgagaaggaaaatatcaggcgctttggcattgct
gtactgggttattacatcagaaacaacattgacaccaagaacctcatagcagaaataaaa
tcgattgctagtctgcccaccgagaactatttcttcaacgtgtcagaggaagctaccctg
tcatccattgctgaggcactgggagaccgcatcttcaacatcgagggcaccggaaaaggg
ggagaggacttccagatgcagatgtcccaggtgggattcagcgctcactactccagcaag
atggatgtgatgatgctgggggcagtgggagcgtacgcgtggagcgggacggtggtccat
cagagaggcggccagcgggcggacatcttccctctgtcagcgttcgaaaggacccttcaa
gacaggaaccacagttcattactgggttactctgtgaccaccctgagtgatggacagaca
gagtattttgttgccggggctcctcgctcaaaccactctggccaagtcatcgtctacacc
gtcacatcctcaaaacaagtcactgtcatcgactctgagagagagaaacagatcggctcg
tacttcggcagcgtgctgtgtcccctggacgtggataaggacggtacgtccgacgtcttg
ctggtcggagctcccatgttcatgaacgacctgaagaaggagcaagggagggtctatctt
ttctccgttaccaagggtatactgagcgaacaaggcttcctggttggtttaagcccaggg
gagaatgcccgttttgggacggccatctctgctgtgcccgatctggaccaggatggcttc
tgtgacgtggtggtcggggcgccgctggaggactctgggaggggcgtggtctatgtttac
aacggagataagaagacactccacaaacaacattcacagagaatccttgggtctaagttt
gacttcatgatgcagtattttgggcggtctctggatggctatggggacatgaatgatgac
accatacctgatatctctgttggggctcatgggaaggtgatccagctctggtctcgagga
ctggctgctgtgacggccaaggcttctttctcccctgataaaatcaacatcctgagtaag
ccttgcttgataaacggacagaagctctcctgtttcaagacagacatctgcttcagcgca
acgtttagaccaaagaaacctgtgggacccctaactgtcaaatacaacctaactctggat
gctgacctgcagtcgtcccgggtctcctcacgaggcctgttcagtcagaaccgcgaacga
ctcctctctggaaacgttcagatatcatcgtccaccacctctgtttgccacaattaccaa
gtttacgttcaggaaagcgcagactttgtgaactccatcagtctgcgcgttgacatcggc
cttcagaacccagacgccaaccctgtccttgatgttttctctcagactgcatgggacttc
tctattcccttctccaaacagtgtggttctgatgacgtgtgtgtcagtgatctggtgctc
agtgtgaagaaggtgacagaggtacccagtgttggctctgtgctggtcagttctaacaac
agagagatctccttcgaggtactagtgaagaacatcaaggagaatgcgtacaacacccag
attttggtcacgtactccaagagcctcttctacgcttccataacatctccgagtgatggg
aaagaggtgaagtgcacgtctacaacacaaagtgacgtgctagcctgccaggtgggatac
cctgccttagagaaggacgaggaggtgaaattttggttcaactttgacttcaaccttaac
cacttgcagagccaagcaagagttcattttcaggccaaaagtgctggtaaagaggaaagt
ccagcagataatacagtggacatcaccattcctgttcgttatgatgctgagattattatg
accagggaatccaacattaacttctatgtggtggatgaggccaaggaggtgcagacaagt
gtaaaaacattagatgacattggccctgagtttaacttctccctcaagatttccacaggt
aacttcccagtcaggctgttatacctgaccatctctgttccagtcaccactcgagggggg
aacccactaatctacgttacaggcctggacacaccaacgggagactcggtgagctgtgac
agtgccctggtcgatccactgaagattggatccaaaccacacacagccttattctccaag
gagagcctcagaggtatccacagactggactgctggaacgtgaagtgccaggcgatcaaa
tgcgtcattaaagacatgagagtgaaaagcgtctactttgtgaacgtcacaacgagaatc
tggaacggcactttggcttctgccaccttccagactattgagctgattacaaacacagag
atagtcacttctcagccagatctacttatcattacccacaagacgatgccggtgggggta
acagtcagtaaaccaggtgagacagcagatgtacctgtgggggtgattgtgggcagtgtg
atcggaggactgctcctactggctctggtggtggggctgctgtggaagtttggcttcttc
aagaggaagtaccagcagctacgtgagaggacagagtacagtgaggaacctcaggagaac
gggccatga
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integrated database retrieval system
