Salmo trutta (river trout): 115165127
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Entry
115165127 CDS
T08542
Symbol
top3b
Name
(RefSeq) DNA topoisomerase 3-beta-1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
stru
Salmo trutta (river trout)
Pathway
stru03440
Homologous recombination
stru03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
115165127 (top3b)
03460 Fanconi anemia pathway
115165127 (top3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stru03032
]
115165127 (top3b)
03400 DNA repair and recombination proteins [BR:
stru03400
]
115165127 (top3b)
Enzymes [BR:
stru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
115165127 (top3b)
DNA replication proteins [BR:
stru03032
]
Eukaryotic type
DNA Topoisomerases
115165127 (top3b)
DNA repair and recombination proteins [BR:
stru03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
115165127 (top3b)
FA (Fanconi anemia) pathway
115165127 (top3b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_TOP3B
Toprim
EBNA2_Core
Motif
Other DBs
NCBI-GeneID:
115165127
NCBI-ProteinID:
XP_029574024
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All DBs
Position
27:40378869..40410317
Genome browser
AA seq
857 aa
AA seq
DB search
MKTVLMVAEKPSLAQSIAKILSKGSCSSRKGLNGACSVHEYMGTFSGQSVRFKMTSVCGH
VMSLDFIGKYNNWDKVDPAELFTKAPTEKKEANPKLNMVKFLQVEGKGCDYVVLWLDCDK
EGENICFEVLDAIEPVMNRPYGSERTVYRAKFSSITDTDIWAAMNKLGEPNRNEALSVDA
RQELDLRIGCAFTRFQTKYFQGKYGNLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETY
WVIQAKVFKGKESPLTLDWDRVRVFDREVGQMFVNMTKTSREAKVESVSKKEKAKQRPLA
LNTVEMLRVASSSLGMGPQHTMQIAERLYTQGYISYPRTETNHYHDNFDLKGTLRQQANN
PFWAQEVKALLSEGLNRPRKGADAGDHPPITPMRAASEGELGSDGWRLYEYIVRHFIATV
SQDCKYLQTTISFTIASEGFSCSGKTLISPGFTEVMPWLGIPLEEAMPVCERGDVFTVEE
IKLVERQTCPPDYLTEADLITLMEKHGIGTDASIPVHINNISQRNYVTVENGRKLKPTNL
GIVLVHGYYKTDAELVLPTIRGAVEKQLNLIAQGKANYQQVLQHTLDIFKRKFHYFFDTI
ASMDELMEVTFSPIAATGKPLSRCGKCHRFMKYIQAKPSRLHCAGCDETYSLPQNGAIKL
YKELRCPLDEFELVLWTSGSRGKSYPLCPYCFSNPPFRDMKKGMGCNECTHPSCQHSLNS
LGIGQCVECEGGVLVLDPTSGPKWKMACNRCNVMVHFFEHAHRVQVAQESCEACEASLVA
VDFNKTRSPLPDGEMQHSGCVFCDPVFQDLVELKHATMRHPSMTRGGGARRGGRGRGRGR
REKKPKDKMAALAAYFV
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgaagacagttttgatggtagcggagaagccgtcgttggctcagtcaattgccaaaatc
ctctctaaaggcagctgctccagtcgtaaaggtctgaacggagcatgttcggtccacgag
tacatgggtaccttctcaggccagagcgtgcgctttaagatgacgtcggtgtgtgggcac
gtgatgagtctggatttcatagggaagtataataactgggacaaggtggatccagctgaa
ctcttcactaaagcccctactgagaagaaggaggccaaccccaaactcaacatggtcaag
ttcctacaggttgaaggcaagggatgtgactatgtggttttgtggttggactgcgacaaa
gagggagagaacatctgctttgaggtcctggacgctattgagccggtgatgaaccgtccc
tacggtagtgaacggaccgtctaccgagccaagttcagctccatcaccgacacggacatc
tgggcggccatgaacaagctgggagagcccaaccgtaacgaggctctgtctgtagacgcc
cggcaggagctggacctgcgcattggctgtgccttcacccggttccagaccaagtacttc
cagggtaaatatggtaacctggactcatccctgatctcctttgggccatgtcagacccct
acactgggcttctgtgtggagcgccacgacaagatccagtccttcaaaccagagacctac
tgggtcatacaggctaaggttttcaaagggaaagagtctcctctgactctggactgggac
agggtgagggtcttcgacagagaggtgggacagatgtttgtcaacatgactaagacctcc
agggaggccaaggtggagtcggtgagtaagaaggagaaggccaagcagagacctctggcc
ttgaacaccgtggagatgctccgagtggccagctcctctctaggtatgggtccacagcac
accatgcagatagcagagcgtctgtacacccagggttatatcagctaccctcgtactgag
accaaccactaccacgacaactttgacctgaaggggacactcagacagcaggctaacaac
ccattctgggctcaggaggtgaaggctctgctgtcagagggactgaaccgtcccaggaaa
ggagctgacgcaggagatcaccctcccatcacccccatgagggctgcctccgaaggagaa
ctaggaagtgacgggtggcgtctgtatgagtacatcgtgcgtcacttcatcgccacggtg
agtcaggactgtaagtacctgcagacaaccatctccttcaccatcgcctccgagggtttc
tcctgcagtgggaagacactcatatcacctggctttacggaggtgatgccgtggctgggt
atccctctagaggaggccatgccagtgtgtgagaggggagatgtcttcacagtggaggag
attaaactagtggagagacagacctgccctccagactaccttactgaggccgacctcatc
acactgatggagaaacacggcataggtactgacgccagcatcccggtccatatcaacaac
atctctcagaggaattatgtgactgtggagaacggacgcaagctcaaacccaccaacctg
ggcatcgtcctggtgcatggatattacaagacagatgctgagctggtgctgcctaccatc
cgtggtgcagtagagaaacagctgaacctgatcgctcagggcaaggccaactaccaacag
gttctgcaacacacactggacatcttcaagaggaagttccactacttctttgacaccatc
gctagtatggacgagctcatggaggtgacgttctctcccatcgctgccaccggcaagccc
ctgtctcgctgcggcaagtgccatcgcttcatgaagtacattcaggccaagcccagccgg
ctgcactgtgctgggtgtgatgagacgtacagcctgcctcagaacggcgccatcaagctg
tacaaggagctgcgctgtccgctggatgagtttgagctggtgctgtggacctctggatcc
aggggaaagagctaccccctttgtccctactgcttcagcaacccccccttcagggacatg
aagaaaggtatgggatgtaatgagtgcacccacccgtcctgccaacacagtctcaactcc
ctgggtattggtcagtgtgtggagtgtgagggcggggtgctggttttggaccctacctcc
ggccccaagtggaagatggcctgcaacaggtgcaatgtgatggtgcacttctttgagcac
gcacacagggtgcaggtagcccaggagagctgtgaggcatgtgaagcgtccctggtagcg
gtggacttcaacaagacgcgctccccgctccctgacggagagatgcagcacagcggctgt
gtgttctgcgacccagtcttccaggacctggttgaactcaaacacgccaccatgagacac
ccctccatgacccgcggtgggggtgcacggcgaggggggcggggcaggggcagagggcgc
agggaaaagaaacccaaagataagatggctgccttggcagcgtacttcgtgtag
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