Salmo trutta (river trout): 115165281
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Entry
115165281 CDS
T08542
Name
(RefSeq) host cell factor 1-like isoform X1
KO
K14966
host cell factor 1
Organism
stru
Salmo trutta (river trout)
Pathway
stru03083
Polycomb repressive complex
stru04980
Cobalamin transport and metabolism
stru05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
115165281
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
115165281
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115165281
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
stru01009
]
115165281
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
stru03036
]
115165281
03029 Mitochondrial biogenesis [BR:
stru03029
]
115165281
Protein phosphatases and associated proteins [BR:
stru01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
115165281
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
115165281
HMT complexes
COMPASS/SET1 complex
115165281
MLL-HCF complex
115165281
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
115165281
Mitochondrial biogenesis [BR:
stru03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
115165281
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_5
Kelch_3
Kelch_4
Kelch_1
Kelch_6
fn3
Motif
Other DBs
NCBI-GeneID:
115165281
NCBI-ProteinID:
XP_029574181
Ensembl:
ENSSTUG00000010191
LinkDB
All DBs
Position
28:3091287..3153510
Genome browser
AA seq
1954 aa
AA seq
DB search
MTSGNSGSVLQPRWKRVLGWSGPVPRPRHGHRAVAIKELMVVFGGGNEGIVDELHVYNTA
TNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWEWKRLKP
KSPKNGPPPCPRLGHSFSLVGNKCFLFGGLANDSEDPKNNIPRYLNDLYTLELRAGSSVV
GWDIPITYGVLPPPRESHTAVVYTEKTSSKSRLVIYGGMSGCRLGDLWTLDIDTLTWNKP
SINGTAPLPRSLHSATTITNKMYVFGGWVPLVMDDVKVATHEKEWKCTNTLACLNLDSMA
WESVLMDSLEDNIPRARAGHCSVAINSRLYVWSGRDGYRKAWNNQVCCKDLWYLETEKPR
PPSRVQLVRANTSSLEVSWGAVPTADTYLLQLQKYDIPPTSATTTPGVSPATSLPVNSPK
SPVTASAASPQGLPLQGITLVPSPTTTMPGSPLAAANARGPAILKVSAPHATTGTSIVTV
RQANQGGKSPVTVTSLPAGVRMVVPAQGAQGTPMGSSPQMSGMAALAAAAAATQKIPPST
ATMQLPAGATIVKTVAMSPGAQTAKVASPVMVSNPATRMLKTAAAQVGTSGVATPGTPSR
PIITVHKSGTVTVAQQHQVVTTVVGGVTKTITLVKSPLTMGGGGTLLTAANQGQNKVMSG
KDVQHWLSNLSNLGKVMSVVQTKPGQTGAVTGQAGSSLQHIIQTKGPLPAGTILKLVTSA
DGKPTTIITTSQAGTAGGKPTILSYSGMPTTTKPGTHIIKTIPMSAIGQAGVTGSGMKSP
ITIITTKMMTPGTGTPGKIISAMPRAGAGQQGLTQVVLKGAPGQPGTILRTVPMGGVRLV
SPVTVSGVKPNVTTLVVKGTTGVTTFGTVTGTVSSSLAGGSVATATPITTLGTMTTLPGQ
VTVSAAQAGAQPTQVTLITTPSGVDAQPVHDLPVSILSSPTSADPSSTQPEAGDPGTVTL
VCSNPPCETHETGTTNTATTASANMTGNGGVERMCTNPPCETHETGTTNTQTTASSNMGQ
VQQVCTNPPSETHDTGTTNTQTIASCNMGSNQQQQGSSVTNNTSGSDPPSSPCPSSSSSS
GAVSPSSVSGTSSVPGVLRPETLRTGTTYTSTTARSNMGSDKMGMTLSSSSSDNQSKSSS
AGGGGGSPLTSSVCSSPRCETHQTSPTETGAEVSSSATQVCSNPPCETHQISPTETGAEV
SSSATQVCSNPPCETHQTGTTTTSTQANSSMGNGQTTGTVQKVCSNPPCETHETGTTNTP
SQTTSNLAGTGTGTVQRVCSNPPCETHETGTTNTPSQTTSNLAGTGTGTVQRVCSNPPCE
THETGTTNTATTAQPGDSTQGDNGTTEAPSSSSVTTESSAVVASGRAVTTVTQSTPTPGP
SVPEISSMSGSSEAMVAACIEGEEAMQTDCLPEGTVRVVTLEEAAAAGIQVHVEGMEEQN
QGEQEGLPAELMSEGGSGGQQTLMVTGLTPEELAVTAAAEEAAQHAAAEEANAQAMAIQA
VLQAAQHAVMNEGDSGQEGQHQTTTIPIVLTQAELAALVQQQQQLQEAQALAQAAAAAAA
AAQHNQPTEGLAPADSLNDPASESNGQELAAAVTQAVARLAPTCTMVVTNPAKSQPMMVA
SPAKTQPMMVASPAKTQPMMVASPAKTQPMMVASPAKTQPMMVASPAKTQPMMVASTAKT
QTMMVASPAKMQAAATLAEVANGIESAAGRQGAPPAVAKAPVKKDNQWFDVGIVKVTNTV
VTHYYLPTDDQATVDDDSGAIPDYSQMKKMELQPGTAYKFRVAGINTCGRGNFSEVSAFK
TCLPGFPGAPCAIKISKSPDGAHLTWEPPSVTSGKIIEYSVYLAIQSAQSGEQAKPTTTT
TPAQLAFMRVFCGPNPSCLVQSSSLSNAHIDYTTKPAIIFRIAARNEKGYGPATQVRWLQ
EVGKDGVAAKPTAKRPGSSPDMKATGPKKARSDQ
NT seq
5865 nt
NT seq
+upstream
nt +downstream
nt
atgacatctgggaactctggctcagttctgcagccacggtggaagcgggtgttgggttgg
tccggccctgtccctcggccccgacacggacatcgtgcagttgcaatcaaagaattgatg
gttgttttcgggggaggcaatgaaggaattgtggatgagctacacgtatataacacagca
accaatcagtggttcattcctgctgtccgtggcgacatcccgcctggctgtgctgcgtat
gggtttgtgtgcgacggcacaaggctgctggtgttcggagggatggtggagtatggcaaa
tacagtaacgatctgtatgaactgcaggccagtcgctgggagtggaagcgtctgaagccc
aagtctcctaagaacggccctcctccctgtccccgcctgggacacagcttctccctagta
gggaacaaatgcttcctgtttggaggactggctaacgacagtgaggaccccaagaacaac
atccccagatacctgaatgatctgtatacgttagagctgcgtgccggctccagtgttgta
ggctgggacatccccatcacctacggggtgttgcccccacccagagagagccatactgcc
gtggtctacacagagaagacctctagcaagtcccgtctggtcatctatgggggtatgagc
ggctgtcgactgggggatttgtggaccctggatatagacaccctgacatggaataaaccg
tctatcaacgggacagctcctcttccccgcagtctccactctgccacaaccatcaccaac
aagatgtacgtgttcggaggctgggttcccctggtgatggatgacgtcaaagtagcgaca
cacgagaaggagtggaagtgcaccaacacactggcctgtctcaacctagactcgatggcg
tgggagtcggtgctgatggattctctagaagataacatccccagggccagggccggtcac
tgctccgtggccatcaactcacgtctctatgtgtggagtggacgggacggataccgcaag
gcctggaacaaccaggtgtgctgtaaggacctctggtacctggagacagagaagccccgc
ccgccgtcacgagtgcagctggtgagagccaataccagtagcctggaggtgagctggggg
gcggtacctaccgcagacacctacctgttgcagctgcagaagtacgatatccctcccacc
tcagccaccactacccccggggtcagccccgcgacgtcactaccggtcaattcccccaag
agccctgtcacagcctctgcagcgtctccgcagggcctgcctctccaaggcataacgctg
gtcccctcccccaccaccacaatgcctgggagtccactggctgctgctaatgcacgcggg
ccagctatcctgaaggtgtctgctccccacgccaccacaggcacctccatcgtcacggtg
agacaggccaaccagggcgggaaatctcccgtaacggtgacgtcacttcctgccggggtc
cgcatggtggtgccggcccagggtgcacagggaacgccaatgggcagcagccctcagatg
agtggcatggctgcgttggctgcagcagctgcggccacccagaagatcccgccctccacg
gccaccatgcagctgccagccggtgccactatagtcaagaccgtggccatgagccccgga
gcacagactgctaaagtagcttcgcctgttatggttagtaacccagcaacccgcatgctg
aagactgctgccgctcaggtgggcacgtcaggtgttgccacacccggaactccttctcgc
ccaatcatcaccgtgcacaagtctggcacggtgacggttgcccagcaacaccaggtggtt
accacggtagtgggaggagtcaccaagacaatcaccctggttaagagtccccttactatg
gggggaggtggaacactgctgactgcggccaaccagggtcaaaacaaagtgatgtctggc
aaggacgtgcagcattggctgtctaacctgtccaacctggggaaggtgatgtccgtggtc
cagaccaagcctggtcagaccggagcggtgacaggacaggctggctccagcctccagcac
attatacagactaaaggtcccctcccggcgggcaccatcctgaagcttgtgacatcagcg
gacggcaagcccaccaccatcatcacaacatctcaggctgggacggcgggaggcaaaccc
accatcttatcttacagcggcatgcccaccaccaccaagcctggcacgcacatcatcaag
accatacccatgtctgccatcggacaagcaggagtgacaggaagtggtatgaagtccccc
attaccatcattaccactaagatgatgacaccaggcactgggacaccaggcaagatcata
agcgcaatgcccagagctggggctggtcaacagggactcacacaggtggtgctgaagggt
gcccccggacagcccgggactattttacggaccgtccccatgggaggagtacgtctcgtc
tccccggttactgtttccggcgtcaaacctaacgtcaccacccttgtcgtcaagggaacc
acaggtgtgacaacgtttggtacggtcactgggacagtgtcttcaagcctggcgggtgga
agcgttgccacggctacccccatcaccaccctgggcaccatgaccactctgcctggacag
gtcaccgtctctgcggctcaggcgggagctcaacccactcaggtgaccctaatcacgacc
cccagtggtgtggatgctcagcctgtccacgacctccctgtctccatcctgtcctcccct
acttccgccgacccctcgtccacccagcccgaggcaggcgacccaggaacggtaaccctg
gtctgctcaaaccccccctgcgagacccacgagaccggcactaccaataccgctacaacg
gcctccgctaacatgactggtaatggtggggtggagaggatgtgtacaaacccgccgtgt
gaaactcacgagaccggcaccaccaatactcaaacgacggcgtcctccaacatgggccag
gtacagcaggtgtgcaccaacccgccgtcagagactcacgatacaggtaccaccaacacc
cagaccatcgccagctgtaacatgggatccaaccagcaacaacaaggttctagtgtgacc
aacaacaccagcgggtctgatcccccgtcctctccgtgcccctcctcctcttcctcctcc
ggagccgtctccccttcgtctgtttctggtaccagctctgtgcccggggtgctacgaccc
gagactctgagaacggggaccacctacacctcgaccacggcacgctctaacatgggttct
gacaagatgggcatgacgctcagctcctcgtcctcagataaccagagcaagtcatccagc
gctggtggaggaggaggatccccactcacctcttctgtctgctccagtccacgttgtgaa
acacaccagacaagccccactgagaccggagctgaagtcagcagcagcgccacacaggtc
tgctccaatccaccttgtgaaacacaccagataagccccactgagaccggagctgaagtc
agcagcagcgccacacaggtctgctccaatccaccttgtgaaacacaccagactggcact
accactacgtcgacgcaggccaactccagtatgggcaacgggcagactacagggacagtg
caaaaggtgtgttccaatccgccgtgtgaaacacacgagaccggcaccaccaacaccccg
tctcagactacgtccaacctggcggggacgggaacaggcacggtccagagagtgtgttcc
aatccgccgtgtgaaacacacgagaccggcaccaccaacaccccgtctcagactacgtcc
aacctggcggggacgggaacaggcacggtccagagagtgtgttccaatccgccgtgtgaa
acacacgagaccggcaccaccaacacggctactacagcccagcctggtgactcgacacag
ggagacaacggaactacagaggctccctcgtcgtcctcggtaaccacagagtccagcgcc
gtggtggcgtctggtcgagcagttaccacggttacccagtccacacccacacctggaccc
tccgtacctgagatctcgtcgatgtctgggtcgtctgaggcgatggtggcggcatgtata
gagggagaggaggccatgcagaccgactgtctcccagagggcacggtgagggtcgtgacc
ctggaggaggctgctgcagctgggatacaggtccatgtggagggcatggaggaacagaac
cagggggagcaggagggcctgcctgcggagctgatgtctgaaggtggctcggggggccag
cagaccctgatggtgacaggtttaacccccgaggagctggctgttaccgctgctgccgag
gaggcggcacaacacgctgctgccgaggaggctaacgcccaggccatggccatacaggct
gtcctgcaggccgcacagcacgctgtcatgaatgaaggagacagtggccaggagggccag
catcaaaccaccaccatccccattgtgttgactcaggctgaactggcagccctggttcaa
caacaacagcagctacaggaagcccaggccctggctcaggcggcggcggcagcagcagca
gcagcacagcacaaccagcccaccgagggcctggccccagcagacagcctgaacgaccca
gcatcagagagtaacggccaggagctggctgcagcagtgacccaggctgtggcccggcta
gccccgacctgcaccatggtggtgacaaacccggctaagagtcagcccatgatggtggcc
agcccggctaagactcagcccatgatggtggccagcccggctaagactcagcccatgatg
gtggccagcccggctaagactcagcccatgatggtggccagcccggctaagactcagccc
atgatggtggccagcccggctaagactcagcccatgatggtggccagcacagctaagact
cagaccatgatggtggccagcccagctaaaatgcaggcagctgcgaccctggcagaggtg
gctaacggcatagagtctgctgcagggaggcaaggagctcctcctgcggtggccaaagcc
ccggtgaagaaagacaaccagtggtttgacgttggcatcgtcaaggtgaccaacaccgtg
gttacgcactactacctgcccactgacgaccaagccactgtcgacgatgactctggggcg
atcccagactacagtcagatgaagaagatggaactccagccagggacggcctataaattc
agagtggccgggatcaacacttgtggccgggggaacttctcagaggtctcagccttcaaa
acctgtctaccaggcttccctggagctccctgtgctatcaagatcagcaagagcccagac
ggagcccacctgacctgggagcctccgtcggttacatctggtaagatcatcgagtactcg
gtgtacctggccatccagagcgcccagagtggggagcaagccaagcccactaccaccacc
accccagcccagctggctttcatgcgggtgttctgtgggcccaatccttcctgcctggtg
cagtcgtccagcctctccaacgcacacatagactacactaccaagcctgccatcatcttc
cgcatcgcagcccgcaacgagaagggctacggccctgccacgcaggtcaggtggctccaa
gaagtaggtaaagatggcgttgcagctaaacctactgctaagagaccaggctcctcgcct
gacatgaaagctactggtccaaagaaggccagatcagaccagtaa
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integrated database retrieval system
