Salmo trutta (river trout): 115165283
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Entry
115165283 CDS
T08542
Symbol
hdac6
Name
(RefSeq) histone deacetylase 6
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
stru01009
]
115165283 (hdac6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115165283 (hdac6)
04131 Membrane trafficking [BR:
stru04131
]
115165283 (hdac6)
03036 Chromosome and associated proteins [BR:
stru03036
]
115165283 (hdac6)
Enzymes [BR:
stru01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
115165283 (hdac6)
Protein phosphatases and associated proteins [BR:
stru01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
115165283 (hdac6)
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
115165283 (hdac6)
Membrane trafficking [BR:
stru04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
115165283 (hdac6)
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
115165283 (hdac6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
Motif
Other DBs
NCBI-GeneID:
115165283
NCBI-ProteinID:
XP_029574187
LinkDB
All DBs
Position
28:3182159..3221802
Genome browser
AA seq
1111 aa
AA seq
DB search
MDSVPETRSVRRSPRTSKSPDNNAAKKESGKARKKTSNLQETRRRGRMDRSKGEEDIANQ
LNNLDLCNEASATGTGLVFDNMFTHHCCLWDPSHPECPERVTTIMDMVEKQGLLSRCVTV
EARAASNEELRLVHTKEHVDLMRSTQHMDEDQLKTLADSYDSVYIHPESYTCASLAVGSV
LQLVDKVMTSELQNGFSVARPPGHHAQVDQMNGYCMFNNLAIAARYAQTHHRVERVLIVD
WDVHHGQGIQYIFQEDPSVLYFSVHRYEEGLFWPHLPESDSSAVGTGSGEGYNINLPWNK
IGMKDADYVAAFQQLLLPVAYEFQPQLVLVAAGFDSVIGDPKGEMSASPQCFSVLTHMLL
GLAQGKLLLALEGGYNLQSTAEGVCACLRSLLGESCPRLGSPSIPSDSALKSISRSISAL
YPYWTSLQVLEGGPLSDSDPLNPALTPAESSEELCEERRDSLDLTTGLVYDQRMMEHHNI
WDSHHPELPQRIQRIFSRHEDLGLVSRCLRIPARLALEEELALCHSLEHIAKIKATEGMK
TRDLHRLGDEYNSIFISTESYRSARLAAGACFNAAQAVLTGQVRNGVAIVRPPGHHAEKD
AACGFCFFNTAALTARYAQSISQQPLRVLILDWDVHHGNGTQHIFEEDDSVLYISLHRYE
DGTFFPTSEDAHYNRVGKGKGAGFNVNIPWNGAKMGDAEYLAAFHSVVMPIAREFDPGLV
LVSAGFDAARGDPLGGYQVTPPGYAHLTHLLMGLAGGRVLVILEGGYNLTAISESMSACT
SILLGDPALPLPPLVPPHPNAAVSINKVIRTHSAYWLSLRIQLPESLRLSLPNPKPRGKR
TSKGKKSPRQRNQDGTSPGQGSPQTPSQTTPLPSGGRGDLDLDDLTKGLVSLDLNQSTSA
NPSPASVPVGGARSKVRFSPTKSPVKEVKTEAVPNTPEILQPTPDKTETQAVTMAASDPV
TKGDQESGAATVEVEEASGYSKEPVFELFCGNQDVDGSTMYVVDPLSWCPHLDSVKPVPA
GGIDVFRPCEDCGTDTENWICLCCYKVYCGRYVNQHMVTHGLVSEHRLVLSFADLSVWCY
SCQAYVHNQMVFEAKNAAHCMKFGEDMPLSN
NT seq
3336 nt
NT seq
+upstream
nt +downstream
nt
atggattctgtgccagagaccaggtcagtcagacgttcccctcgcacgtcaaagtcaccg
gacaacaacgcagccaaaaaggagagcggcaaggcccgcaagaagacgagcaacctgcag
gagactcggaggagaggaagaatggacagaagtaaaggagaagaggacatagccaatcaa
ctgaacaacctggatctgtgtaacgaggcttcagccacagggactggtctggtgttcgac
aacatgttcacccaccattgctgtctctgggatcccagccatccagaatgcccagagaga
gtgaccaccataatggacatggtggagaaacagggactgctgtcccgctgtgttacggtg
gaggcgagggctgcgtctaatgaagagttgcgcttagttcacacgaaggagcatgtagat
ctgatgaggtccactcagcatatggatgaagaccagctgaagacactggctgactcctat
gactcggtctacatccaccctgagtcatatacgtgtgccagtctggctgtgggctctgtt
ctgcagctggttgataaggtcatgacctcagagctccagaatggattctctgttgctaga
cctccaggccaccacgcccaggtagaccagatgaacggttactgtatgtttaataatctg
gccatcgcagcgcgctacgcacagacacaccatcgggtggaacgagttctgatagtggac
tgggatgtgcatcacggccaggggatccagtacattttccaggaggatcccagcgttctg
tacttctcagtccacagatatgaggagggtttgttctggccccatctgcccgagtcagac
agcagtgctgtgggcaccggttctggagagggatacaacatcaacctgccctggaataag
attggaatgaaagatgcagactacgttgcagcattccagcagcttcttttgcctgtagcc
tatgagttccagcctcagcttgtcctggtggcagcaggttttgactctgtgataggtgat
cccaagggggagatgtctgccagtcctcagtgtttctctgttctgactcacatgctgctg
ggcctggctcaggggaagttgctgctggctctggagggcggatataacctgcagtccaca
gcagagggggtgtgtgcctgtctgaggtcactattgggggagtcctgcccccgcctgggg
tcaccatccatcccgagtgacagtgcactgaaatccatctccaggtctatctctgctctg
tacccttactggaccagtctgcaggtactggagggagggcctctatcagacagtgacccc
ctgaacccagccctgaccccagcagagagcagtgaagagctctgtgaggagagaagagac
agcttggacctgaccacgggcctggtgtacgaccagaggatgatggaacaccacaacatt
tgggacagccaccacccagagcttccccagaggatccagcgtatcttctcccgtcatgag
gacctgggcttggtgtcccgttgcctgaggataccggctcgacttgccttagaggaggag
ctggctctgtgccacagcttggagcacatagccaagatcaaggccacagaggggatgaag
acgagagaccttcacagactgggagatgagtacaactctatcttcatcagtactgagagc
tacaggagcgcccggctggctgctggggcctgctttaatgcagcacaggctgttctgact
ggacaggtccgtaacggcgtggccatcgtgcgcccccctggtcaccatgccgagaaggac
gctgcctgtgggttctgtttcttcaacactgccgccctgactgcccgatacgcccagtcc
atctcccagcagcccctgcgggtcctcatcctggactgggatgttcaccatggcaacgga
acacagcacatcttcgaagaggatgacagtgtcctatacatctccctgcatcgctacgag
gatgggaccttcttccctacttcagaggatgcacactacaacagagtgggcaaggggaag
ggagcagggttcaacgtcaacatcccctggaacggagccaagatgggcgacgcagaatac
ctggctgccttccactcagtggtcatgcccatcgctagagagtttgacccaggcctggtg
ctggtatcagcagggtttgatgcagccagaggggaccctctaggaggataccaggtgacc
cccccgggctatgcccatctcacccacctcctgatgggactggcaggcggcagagtattg
gtcatcctggaggggggttataacctgactgccatctctgagtctatgtctgcctgcacc
agcattctcctgggagaccccgctctgcctctgcctcccttggtcccgcctcaccccaac
gcagcagtcagcatcaacaaggtcatacgcacccactccgcctattggctgtccctcagg
atacaacttccagagtctctccgcctgtctctgccaaaccccaaacccagagggaagagg
acttctaagggcaagaagtctcccagacagcgtaaccaggacgggaccagccctggtcag
gggtcacctcagaccccgtctcagaccacacctctgccctctgggggtcggggcgacctt
gacctagatgacctcacaaagggactggtgtcactcgacctaaaccaaagtacctcagcc
aatcccagcccagcgtctgtccctgtgggtggagccaggtcgaaggtaaggttcagtcct
acgaagagccctgttaaggaggttaagactgaagctgttccaaatacgcccgagattctc
caaccaacgcccgacaagacagagacgcaggcggtcaccatggctgcctcagacccagtt
accaagggagaccaggagagcggtgctgcgacggtggaggtggaagaggcgtctggttac
tccaaggagccggtgtttgagctgttctgtggaaaccaggatgtggacgggagcactatg
tacgtggtggatcccctgtcctggtgcccccacctagactcagtgaagcctgttcctgct
ggagggatagatgtgtttcggccctgtgaggattgtgggaccgacactgagaactggatc
tgtctctgctgttacaaggtgtactgtggtcgctacgtcaaccagcacatggtaacccac
ggcttggtgtcagaacatcgtctggtgctgagcttcgctgacctgtcagtctggtgttac
tcctgtcaggcctacgtccacaaccagatggtgtttgaagccaagaacgctgcccactgt
atgaagtttggagaggacatgcctctctctaactga
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