Salmo trutta (river trout): 115165329
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Entry
115165329 CDS
T08542
Name
(RefSeq) sortilin-like isoform X1
KO
K12388
sortilin
Organism
stru
Salmo trutta (river trout)
Pathway
stru04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
115165329
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Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
BNR_6
Motif
Other DBs
NCBI-GeneID:
115165329
NCBI-ProteinID:
XP_029574259
Ensembl:
ENSSTUG00000015231
UniProt:
A0A673YMN6
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Position
28:6493637..6533049
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AA seq
819 aa
AA seq
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MGILTYCVLLFIFQHLTSAYDFREGLDNNGRYEFVKDPSLNIEKRSAYVELDQFDSESPD
HIRSRRSADQGDCKSLQGFDTKLTNNTHTFSFNDLSGSVSLAWVGDSTGVILALTTFQVP
FFMLRFAQSKLYRSENYGKSFQDVTNLINNTFIRTEFGIAIGPENSGKVILTGDVSGSLG
SRIFISKDFGNSFEHQDLPFNPLMQITYNPRDANVLLVISNTNELWLSEDFGENWRKIHD
MVCLFKWGMDRNIFFTTSLNGSCNDRGMLDLKGTTDYGKTIKTVATKIFSFGLGGKFLFA
SVMTGTGTLRVIHVSTNQGEEWNMAQLPPVGHEEFYSILAANEDMVFMHVDEPGDTGYGS
IYVSDDRGTVYSKSLERHLYTTTGGDTDFTNVTSLRGVFITSILAEDGSVQSVVSFDQGG
EWVPLQKPANTKCDSTAKDPDKCSLHIHAAYSTAMKLNVPMLPLSEPNAVGLIMAHGSVG
DAISVMKPDVFVSDDGGYTWLQALEGPHHYAILDSGGLLVAVEHSAQLIKDIKFSTDEGQ
CWHVHQFTSDPIHFAGLASEPGARSMNVSVWGYRDSLLSQYWVSVTVDFRELLTRTCEDQ
DYVQWLAHSDDISDPNDGCMLGYKEKLLRLRKASVCWNGRDYEVNKQPTPCPCTLDDFLC
DFGYFRKENSSECVEQPDLKGHILEFCLQGKEELLQTRGYRKIPGDKCEGGTQPERKEIN
LSKRCVSDLLGTQELPMDGDLSSSAPIVVTVLIIVLLAIVAGVLIVKKYVCGGRFLVHSY
SVLQQHAEAQGVDEPLDSNHTQTSNVADFHDDSDEDLLE
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgggaattctaacgtactgtgttttactttttatattccagcatttgacgtcagcttat
gattttagagaaggactagataacaacggacgctatgaatttgtgaaagatcctagtttg
aatatcgaaaagagatctgcatatgtagaattggaccagtttgactctgaatcacccgac
cacattcggagcaggagaagcgctgatcaaggggactgtaaaagtctccagggattcgac
accaagttaactaacaacacccacaccttttccttcaatgacctgagtgggtccgtgtca
ctggcctgggttggagactccaccggggtcatcctggctttgacaacattccaggttcca
ttcttcatgttgagattcgcccagtccaaactctatcgaagtgagaactatgggaagtcg
ttccaggatgtcacaaacctcatcaacaacactttcatcaggacagagttcggcatcgcc
atcggaccagagaactctgggaaggtgatcctgacaggtgatgtgtctggcagcctggga
tctcgtatctttatctccaaagactttgggaacagctttgaacaccaggatcttcccttc
aaccccctgatgcagatcacatacaaccccagagacgccaacgttctcctggttatcagc
aacactaacgagctctggctgtcagaggactttggagagaactggaggaagatccacgac
atggtgtgtctgttcaaatgggggatggacagaaacatattcttcaccaccagcctcaat
ggatcctgcaatgacagggggatgctggacttgaaggggactacggactatgggaagacc
atcaagactgttgccactaagatcttctctttcggcctggggggaaagtttctgtttgcc
tctgttatgactggaactggcactctgagggtgatccatgtgtcgactaaccagggggag
gagtggaacatggctcagctgcctccggttggccacgaggagttctattccatcctagca
gccaatgaggacatggtgttcatgcacgtggacgaaccaggagacacaggctatggcagc
atctacgtgtcagacgacaggggtacagtgtactctaagtctctggagcgtcacctctac
accactacagggggagacactgacttcaccaacgttacctctctacgaggagtcttcatc
accagtatcctggcagaggatggttcggtgcagtccgtggtgtccttcgaccagggaggg
gaatgggtaccgctgcagaaacctgccaacaccaagtgtgactccacagccaaagaccct
gacaagtgcagtctccacatccacgcagcttacagcacggctatgaagctgaacgtcccc
atgctgcctctcagtgaaccaaacgctgtaggactcatcatggctcatgggagtgtgggc
gatgccatctctgtgatgaagcctgacgtattcgtgtcagatgatgggggttacacctgg
ctgcaggccctggagggacctcaccactatgccatcctggactctggtggactcctggtg
gccgtggagcactctgcacagctcatcaaagacatcaagttttccacagacgagggccag
tgctggcacgttcaccagttcactagcgatcccatccacttcgcagggctagcgtcggag
ccgggggcgaggtctatgaacgtcagtgtctggggctacagagactctctgctcagtcag
tactgggtatctgtcaccgtcgacttcagagagctgctcactagaacctgtgaggaccag
gactacgtgcagtggctggcacactctgatgacatcagcgaccctaacgacggctgtatg
ctgggttataaggagaagttactgcgtctaaggaaggcctctgtctgctggaatggacgg
gactatgaggtcaacaagcaacccaccccctgcccctgcaccctggatgacttcctgtgt
gactttgggtactttcgtaaagagaacagctctgagtgtgtggagcagccggacctgaag
ggccacattctggagttctgtctgcaaggcaaggaggagctgctgcagaccagaggctat
aggaagatccctggggataagtgtgagggaggaacacagccggagaggaaagagatcaac
ctcagtaagaggtgtgtcagtgatctgctgggaactcaggaactaccgatggacggcgat
ctgtccagctctgcacccatcgtagtgactgttttaatcattgtgctgctcgcaatcgta
gctggggtcctcatcgtcaagaagtatgtctgcggtggcaggttcctggtacacagctac
tctgtcctacagcagcatgctgaggcccagggagtagacgagcccctagacagcaaccac
actcagaccagcaacgttgccgacttccacgatgattcagacgaggatcttctggagtaa
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