Salmo trutta (river trout): 115165442
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Entry
115165442 CDS
T08542
Name
(RefSeq) integrin beta-7-like isoform X1
KO
K06590
integrin beta 7
Organism
stru
Salmo trutta (river trout)
Pathway
stru04510
Focal adhesion
stru04512
ECM-receptor interaction
stru04514
Cell adhesion molecules
stru04672
Intestinal immune network for IgA production
stru04810
Regulation of actin cytoskeleton
stru04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115165442
04514 Cell adhesion molecules
115165442
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
115165442
09142 Cell motility
04820 Cytoskeleton in muscle cells
115165442
04810 Regulation of actin cytoskeleton
115165442
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
115165442
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
stru04147
]
115165442
04515 Cell adhesion molecules [BR:
stru04515
]
115165442
Exosome [BR:
stru04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
115165442
Cell adhesion molecules [BR:
stru04515
]
Integrins
Integrin beta subunits
115165442
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
EGF_2
Integrin_b_cyt
EGF_integrin
I-EGF_1
EGF_Teneurin
EGF_TEN
vWA_SIBA-E
EGF_Tenascin
Motif
Other DBs
NCBI-GeneID:
115165442
NCBI-ProteinID:
XP_029574416
Ensembl:
ENSSTUG00000006070
LinkDB
All DBs
Position
28:10225692..10236074
Genome browser
AA seq
825 aa
AA seq
DB search
MICKGGAHPKLHVFSHLTQTCQRRTFPSDSQPNLRIPSPCPPTSTVSLTMRKVWLTVVVL
LIHFTELRGSMVLDGRCLSKPTCTECLRSLGCAWCKQKGFLAQGEPDERRCDREEALRKR
HCSDGQILNPQPAIRSRAEEPMGTVVQLEPQNLHLKLRVGMPQSFEVRFRRSEGYPIDLY
YLMDLSYSMKDDLENIRNLGLEVVTAMKNITSAVRIGFGSFVDKVVDPYVSTVEAKLANP
CIERGKGPCQPAFSFKHVLKLTEDVEEFERKVSKQSISSNLDGPESGFDAIMQVAVCQDD
IGWGNVTRILVYTSDDTFHLAGDGKLAGIYQPNDGKCHLNSNGLYNKDTVYDYPSVGHLS
QVLSANNIRLIFAVTDQNIENYEALSEMIPQSVVGLLEDDSNNVVQLISEACNNLSSSIL
LEHRDVPPGLGVSYSSHCGDDRLAQGQDRGECRDVRINQQVNFTVTVTSSSCLSKTESFI
IKVQGINEELRVTVETLCDCDCQDSEEQSSQCHGNGTFHCGICSCDSGHTGQRCECETQP
DKDTSLAVEALCSPAQTNSTGTPLCSGRGSCVCGQCICWGQHRGQHCQCDDISCNRHNNM
ICGGNGKCDCGNCECFHNYTGPACECSTLTDQCQTSNDGICSHRGQCECNECHCHPGFFG
RHCTKPLAPCDTYRACVDCMLHESAINICHHRCGSAKPIRINGTQSFTCQDDTLRFNVEL
RNTGDIFVYYTDTSRGIDPWIINMGKAVVGIVLPGVIMIIIYRLMLEVSYQRERRRYLKD
KENICWEDTQNPLFQEALTTFTNPMHVLEPDADCATSTFGKIKQM
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgatatgcaaaggaggggcccacccaaagttgcatgtgttctcacatctcacccaaact
tgtcaaagaaggacctttccatcagacagtcaacctaacctcaggattccttctccatgc
cctcctacttctactgtctccttgacaatgagaaaggtgtggctgactgtggtggttctt
ctgatacacttcactgagctgagaggatctatggtcctggatggaagatgcctgtctaag
cccacctgcactgagtgtctgagaagccttggctgtgcctggtgtaaacagaagggtttc
ctggcgcaaggggagccagacgagcgtcgctgtgacagggaggaggctctgagaaagaga
cactgctctgacggacagatcctgaacccccagcctgcaatacggagcagggcagaggag
ccaatggggaccgtggtccagctagagccacagaacctccaccttaagctaagagttggc
atgccccagtcattcgaggtgaggttcaggcgttcagagggttaccccatagacctgtac
tacctgatggacctgtcttactccatgaaagatgacctggagaacattaggaacctagga
ctggaggtggtcactgccatgaagaacatcaccagtgctgtcaggataggctttggttcc
tttgtggataaggtggtggacccctacgtcagtacagtggaggccaaactggccaaccca
tgcatcgagaggggcaaaggcccctgccagcctgccttcagcttcaaacatgtactgaag
ctcactgaggacgttgaagagtttgagaggaaggtgagcaagcagagcatctccagtaac
ctagacggcccagagtcaggctttgacgccatcatgcaggtggctgtctgtcaggatgac
attggctggggtaatgtaactcggatcctggtctacacttcagatgataccttccacctg
gcaggtgatgggaagcttgctgggatctaccaaccaaacgacgggaaatgccacctgaat
agcaatgggctctataataaggacaccgtttatgactatccctcagttggacacctatct
caggtcttatcagcaaataacatcaggctgatctttgcagtgacagaccagaacattgaa
aactatgaggcactcagtgagatgatcccccagtcggtggtgggcctcctggaggatgac
tccaacaacgttgttcagctcatctctgaggcctgcaacaacctatcgtcttccatcctc
ctggagcaccgtgacgtcccaccaggcctgggggtctcctacagctcccactgtggtgat
gacaggctagctcaggggcaggacagaggggagtgcagggatgtcagaatcaatcaacag
gtcaatttcacagttactgtgaccagctcgagctgtctgtccaagacagagtctttcatc
atcaaagtgcagggtatcaatgaagagctgagggttaccgttgagacgctgtgtgattgt
gactgtcaggactccgaggaacagtcatcccagtgtcatggcaatggaacattccactgt
ggtatctgtagctgtgattcaggacacacaggccagcgttgtgagtgtgaaacacagccg
gacaaagacaccagtctggccgtagaggccctgtgttcacctgcacagacaaacagcaca
ggcacaccactgtgcagcggccgtgggagctgtgtgtgtggccaatgtatctgctggggc
caacacaggggccaacactgccagtgtgacgacattagctgcaaccgtcacaacaacatg
atctgtggcggtaatgggaagtgtgactgtggtaactgtgagtgtttccataactacaca
ggccctgcatgtgaatgctctaccctcacagatcagtgccagaccagtaacgatggaatc
tgctctcaccgaggacaatgtgaatgtaatgaatgccattgtcaccctggtttctttggc
aggcactgcaccaagcccctggcaccatgtgacacataccgggcctgtgttgattgcatg
ttacatgagtcagccataaacatatgtcaccatcgctgtggctctgccaagcctatccgc
atcaatgggactcaatcattcacctgtcaagatgatactctacgctttaatgtggaactc
agaaatactggtgacatttttgtctactacacagatacttcaagagggattgacccatgg
attataaacatggggaaggcagtggtaggaatcgttttaccaggtgtcatcatgataata
atctaccggctgatgttagaagtgtcctaccagcgggagcgtagaaggtacctgaaggat
aaggaaaatatctgctgggaagacactcaaaatccactgttccaagaggccttgacaaca
ttcaccaaccccatgcatgtgttggagccagatgcagattgtgctacatcaacctttggg
aaaataaaacaaatgtga
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integrated database retrieval system