KEGG   Salmo trutta (river trout): 115165442
Entry
115165442         CDS       T08542                                 
Name
(RefSeq) integrin beta-7-like isoform X1
  KO
K06590  integrin beta 7
Organism
stru  Salmo trutta (river trout)
Pathway
stru04510  Focal adhesion
stru04512  ECM-receptor interaction
stru04514  Cell adhesion molecules
stru04672  Intestinal immune network for IgA production
stru04810  Regulation of actin cytoskeleton
stru04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:stru00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    115165442
   04514 Cell adhesion molecules
    115165442
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    115165442
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    115165442
   04810 Regulation of actin cytoskeleton
    115165442
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    115165442
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:stru04147]
    115165442
   04515 Cell adhesion molecules [BR:stru04515]
    115165442
Exosome [BR:stru04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   115165442
Cell adhesion molecules [BR:stru04515]
 Integrins
  Integrin beta subunits
   115165442
SSDB
Motif
Pfam: Integrin_beta EGF_2 Integrin_b_cyt EGF_integrin I-EGF_1 EGF_Teneurin EGF_TEN vWA_SIBA-E EGF_Tenascin
Other DBs
NCBI-GeneID: 115165442
NCBI-ProteinID: XP_029574416
Ensembl: ENSSTUG00000006070
LinkDB
Position
28:10225692..10236074
AA seq 825 aa
MICKGGAHPKLHVFSHLTQTCQRRTFPSDSQPNLRIPSPCPPTSTVSLTMRKVWLTVVVL
LIHFTELRGSMVLDGRCLSKPTCTECLRSLGCAWCKQKGFLAQGEPDERRCDREEALRKR
HCSDGQILNPQPAIRSRAEEPMGTVVQLEPQNLHLKLRVGMPQSFEVRFRRSEGYPIDLY
YLMDLSYSMKDDLENIRNLGLEVVTAMKNITSAVRIGFGSFVDKVVDPYVSTVEAKLANP
CIERGKGPCQPAFSFKHVLKLTEDVEEFERKVSKQSISSNLDGPESGFDAIMQVAVCQDD
IGWGNVTRILVYTSDDTFHLAGDGKLAGIYQPNDGKCHLNSNGLYNKDTVYDYPSVGHLS
QVLSANNIRLIFAVTDQNIENYEALSEMIPQSVVGLLEDDSNNVVQLISEACNNLSSSIL
LEHRDVPPGLGVSYSSHCGDDRLAQGQDRGECRDVRINQQVNFTVTVTSSSCLSKTESFI
IKVQGINEELRVTVETLCDCDCQDSEEQSSQCHGNGTFHCGICSCDSGHTGQRCECETQP
DKDTSLAVEALCSPAQTNSTGTPLCSGRGSCVCGQCICWGQHRGQHCQCDDISCNRHNNM
ICGGNGKCDCGNCECFHNYTGPACECSTLTDQCQTSNDGICSHRGQCECNECHCHPGFFG
RHCTKPLAPCDTYRACVDCMLHESAINICHHRCGSAKPIRINGTQSFTCQDDTLRFNVEL
RNTGDIFVYYTDTSRGIDPWIINMGKAVVGIVLPGVIMIIIYRLMLEVSYQRERRRYLKD
KENICWEDTQNPLFQEALTTFTNPMHVLEPDADCATSTFGKIKQM
NT seq 2478 nt   +upstreamnt  +downstreamnt
atgatatgcaaaggaggggcccacccaaagttgcatgtgttctcacatctcacccaaact
tgtcaaagaaggacctttccatcagacagtcaacctaacctcaggattccttctccatgc
cctcctacttctactgtctccttgacaatgagaaaggtgtggctgactgtggtggttctt
ctgatacacttcactgagctgagaggatctatggtcctggatggaagatgcctgtctaag
cccacctgcactgagtgtctgagaagccttggctgtgcctggtgtaaacagaagggtttc
ctggcgcaaggggagccagacgagcgtcgctgtgacagggaggaggctctgagaaagaga
cactgctctgacggacagatcctgaacccccagcctgcaatacggagcagggcagaggag
ccaatggggaccgtggtccagctagagccacagaacctccaccttaagctaagagttggc
atgccccagtcattcgaggtgaggttcaggcgttcagagggttaccccatagacctgtac
tacctgatggacctgtcttactccatgaaagatgacctggagaacattaggaacctagga
ctggaggtggtcactgccatgaagaacatcaccagtgctgtcaggataggctttggttcc
tttgtggataaggtggtggacccctacgtcagtacagtggaggccaaactggccaaccca
tgcatcgagaggggcaaaggcccctgccagcctgccttcagcttcaaacatgtactgaag
ctcactgaggacgttgaagagtttgagaggaaggtgagcaagcagagcatctccagtaac
ctagacggcccagagtcaggctttgacgccatcatgcaggtggctgtctgtcaggatgac
attggctggggtaatgtaactcggatcctggtctacacttcagatgataccttccacctg
gcaggtgatgggaagcttgctgggatctaccaaccaaacgacgggaaatgccacctgaat
agcaatgggctctataataaggacaccgtttatgactatccctcagttggacacctatct
caggtcttatcagcaaataacatcaggctgatctttgcagtgacagaccagaacattgaa
aactatgaggcactcagtgagatgatcccccagtcggtggtgggcctcctggaggatgac
tccaacaacgttgttcagctcatctctgaggcctgcaacaacctatcgtcttccatcctc
ctggagcaccgtgacgtcccaccaggcctgggggtctcctacagctcccactgtggtgat
gacaggctagctcaggggcaggacagaggggagtgcagggatgtcagaatcaatcaacag
gtcaatttcacagttactgtgaccagctcgagctgtctgtccaagacagagtctttcatc
atcaaagtgcagggtatcaatgaagagctgagggttaccgttgagacgctgtgtgattgt
gactgtcaggactccgaggaacagtcatcccagtgtcatggcaatggaacattccactgt
ggtatctgtagctgtgattcaggacacacaggccagcgttgtgagtgtgaaacacagccg
gacaaagacaccagtctggccgtagaggccctgtgttcacctgcacagacaaacagcaca
ggcacaccactgtgcagcggccgtgggagctgtgtgtgtggccaatgtatctgctggggc
caacacaggggccaacactgccagtgtgacgacattagctgcaaccgtcacaacaacatg
atctgtggcggtaatgggaagtgtgactgtggtaactgtgagtgtttccataactacaca
ggccctgcatgtgaatgctctaccctcacagatcagtgccagaccagtaacgatggaatc
tgctctcaccgaggacaatgtgaatgtaatgaatgccattgtcaccctggtttctttggc
aggcactgcaccaagcccctggcaccatgtgacacataccgggcctgtgttgattgcatg
ttacatgagtcagccataaacatatgtcaccatcgctgtggctctgccaagcctatccgc
atcaatgggactcaatcattcacctgtcaagatgatactctacgctttaatgtggaactc
agaaatactggtgacatttttgtctactacacagatacttcaagagggattgacccatgg
attataaacatggggaaggcagtggtaggaatcgttttaccaggtgtcatcatgataata
atctaccggctgatgttagaagtgtcctaccagcgggagcgtagaaggtacctgaaggat
aaggaaaatatctgctgggaagacactcaaaatccactgttccaagaggccttgacaaca
ttcaccaaccccatgcatgtgttggagccagatgcagattgtgctacatcaacctttggg
aaaataaaacaaatgtga

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