Salmo trutta (river trout): 115165483
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Entry
115165483 CDS
T08542
Name
(RefSeq) structural maintenance of chromosomes protein 1A-like
KO
K06636
structural maintenance of chromosome 1
Organism
stru
Salmo trutta (river trout)
Pathway
stru04110
Cell cycle
stru04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
115165483
04114 Oocyte meiosis
115165483
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
stru03036
]
115165483
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
115165483
Meiosis-specific proteins
Cohesin complex and associated proteins
115165483
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_15
AAA_21
AAA_29
ABC_tran
SlyX
Motif
Other DBs
NCBI-GeneID:
115165483
NCBI-ProteinID:
XP_029574498
Ensembl:
ENSSTUG00000025324
LinkDB
All DBs
Position
28:11854796..11876547
Genome browser
AA seq
1229 aa
AA seq
DB search
MGYLKLIEIENFKSYKGRQIIGPFHKFTAIIGPNGSGKSNLMDAISFVLAEKTSNLRVKT
LKDLIHGAPVGKPAANRAFVSMVYHEDSGEERTFTRIIIGSSSEYRINSKVVNLAEYSEE
LEKLGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRSGELAQEYDRRKKEMVKAEE
DTQFNYHRKKNIAAERKEAKQEKEEAERYQRLKDEVVKAHVQMQLFKLYHNDAEIEKLNR
ELLQHNKGIDKDRKKMDHVEEELKEKKKELGRMMRDQQTVEKEIKEKDAELNQKRPQYIK
AKENTSHKIKKLEAAKKSLQNAQKLYKKRKGDMDELEKEQGAVEMARQEFDDRMEEEAQS
QGQDLTLEENQVKVYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAK
IKQKIREIEENQKRIEKLEDYITTSKQSLDEQKRMEEELTEQVEGAKNRIDEINLELNQV
MEQLGDARIDRQENSRQARKAEIMDSIKRLYPGSVYGRLIDLCQPTQKKFQIAVTKVLGK
NMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELRGAKLVIDVIRY
EPPHIKKALQYACGNALVCENVDDARRIAFGGPYRHKTVALDGTLFQKSGVISGGASDLK
AKARRWDEKAVDKLKDKKEKLTEELKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLE
QTKTRHLSLNMQEKSKLESELANFCPRINDIKRIIQSREKEVNNLRDRMNVVEDEVFIEF
CKEIGVRNIREFEEEKVKRQNEIAKKRLEFETQKTRLGIQLDYEKNQLKEDQEKVMMWEQ
TVKKDETEIERLKKEEHRHMKTIDETMSQLQDLKNQHLTKKSEVNDKNHQMEEIRKKLGG
ANKELTQLQKEVTAIETKLEQKRSDRHNLLQACKMQDIRLPLRSGTMDDIGQGEGSSQQE
ESNSSQRTSSTVLAKEALIEIDYSNLSEDLKDALAEDEIKAEMHTLQQRLNEQQSILQRI
SAPNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKERFDRFNACFEAVSTN
IDEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALAL
LFAIHSYKPAPFFVLDEIDAALDNTNIGKVANYIKDQSVNTQAIVISLKEEFYTKADSLI
GVYPEQGDCVISKVLTFDLSVYHDANPNE
NT seq
3690 nt
NT seq
+upstream
nt +downstream
nt
atgggttatttgaagctgatagagatcgaaaacttcaaatcttacaagggccgacaaatc
atcggcccctttcacaagttcactgcgattattgggcccaatggatccggcaagtccaac
ctcatggacgccatcagctttgtgctggctgagaagaccagtaacctgcgtgtgaagact
ctgaaggacctgatccacggagctcccgtggggaaaccagcagccaacagagcgtttgtg
agcatggtgtaccatgaggacagtggagaagagcgcaccttcaccagaatcatcattggc
tcgtcatcagagtaccgaatcaacagtaaggtggtgaatctggcagagtacagcgaggag
ctggaaaaactaggcatcctcatcaaggccaggaacttcctcgtcttccagggtgctgtg
gagtccatagccatgaagaaccctaaggagcgtacggctctgtttgaggagatctcccgg
tctggggagttggctcaggagtacgaccgcaggaagaaggagatggtgaaggctgaggag
gacacacagttcaactaccaccgcaagaaaaacattgccgcggaacgcaaagaggccaag
caggagaaagaggaggctgagcgttaccagcgtctgaaggacgaggtggtgaaagcccac
gtccagatgcagctgttcaaactgtatcacaatgatgctgagatcgagaagctgaaccgc
gagctgttgcaacacaacaaggggattgacaaggaccgcaagaagatggaccacgtggag
gaggaactgaaggagaagaagaaagagctggggaggatgatgagagaccaacagactgtg
gagaaagagatcaaggagaaggacgctgagctgaaccaaaagcgaccccagtacatcaag
gccaaagaaaacacctcccacaagatcaaaaaactagaagcagccaagaagtccctccag
aacgcccagaagctgtacaagaagaggaagggggacatggatgagctggagaaagaacag
ggagccgtggagatggcccggcaggagttcgacgaccgaatggaggaggaggcccagagc
cagggacaggacctcacactggaggaaaatcaggtgaaggtgtaccaccgtctgaaggag
gaggccagtaagcgggcggccactcttgcccaggagctggagaagttcaacagagaccag
aaggcagaccaggatcgcctcgacctggaagagaggaagaaagtggagactgaggcaaag
atcaagcagaagatccgtgagatagaggagaaccagaagcgtattgagaagctggaggac
tacattaccaccagcaagcagtctctggatgaacagaagagaatggaggaggagctgact
gagcaggtggagggggcaaagaacaggatcgacgagatcaacctggaactcaatcaggtg
atggagcagctaggagacgccaggattgacagacaggagaacagcaggcaggcacgcaaa
gcagagatcatggacagcatcaagagactgtaccccggatctgtgtacggccgtctgatc
gacctgtgtcagcccactcagaagaagtttcagatcgctgtgaccaaggtgctgggcaag
aatatggacgccattatcgtggactcagagaagaccggtagagactgtatccagtacatt
aaagagcagagaggagagccggagaccttcctgcccctcgactatctggaggtgaagcct
acagatgagaagctgcgtgagctgcgtggagccaagcttgtgatcgatgtgatccgctac
gagccgcctcacattaagaaggccctgcagtacgcctgtggtaacgcactggtctgtgag
aacgtagatgatgctcgacgcatcgccttcggagggccctacagacacaagacggtggcc
ctggacggtactctgttccagaagtctggtgtgatctcgggtggagccagtgatctgaag
gctaaggccaggcgttgggatgagaaggctgtggacaaactcaaggacaagaaggaaaaa
ctcactgaggaactcaaggagcaaatgaaggctaagaggaaggaggcagagctgcgtcag
gtccagtctcaggcccacggcctccagatgagactgaaatactcccagagtgacctggaa
cagaccaagacccgacacctctccctcaacatgcaggagaagtccaagctggagagtgag
ctggctaacttctgccctcgcatcaacgacatcaagaggatcatccaatcacgtgagaag
gaggtcaataatctgagagaccgtatgaacgttgtggaagacgaggtgttcatcgagttc
tgtaaggagatcggagttaggaacatcagagagttcgaggaggagaaggtcaagaggcag
aacgagatcgcaaagaaacggctggagtttgagacccagaagactcgtctgggcatccag
ctggactatgagaagaaccagctgaaggaggaccaagagaaggtcatgatgtgggagcag
accgtcaagaaggacgagaccgagatagagagactcaagaaggaggagcaccgccacatg
aagaccatagatgagaccatgtcccagctgcaggacctgaagaaccagcacctcaccaag
aagtcagaggtcaacgacaagaaccaccagatggaggagatacgtaagaaactaggagga
gccaacaaggagctgacccagctgcagaaagaggtgacggccatcgagaccaagctggag
cagaaacgcagcgaccgccacaacctgctgcaggcctgtaagatgcaggacatcagactg
ccgctacgctctgggaccatggacgacatcggccagggagaggggagctcccagcaggag
gagtctaacagcagtcagagaacgtccagtactgtcctggctaaagaggctctcatagag
atagattacagcaacctgtctgaagacctcaaggacgcgctggcggaggatgagatcaaa
gcagagatgcacacactgcagcagcgtctcaatgagcagcagtctatactgcagaggatc
agcgcacccaacatgaaggccatggagaaactagagtctgtcagagacaagttccaggag
accagcgatgagtttgaggcggcccgtaagagagccaagaaagccaagcaggcgtttgag
cagatcaagaaggagaggtttgaccgctttaacgcctgttttgaggctgtatccaccaac
atcgatgagatctacaaagccctgtcacgcaacagctctgcccaggccttccttgggcca
gagaaccctgaggagccttacctggatgggatcaactataactgtgttgcccctggaaag
aggttcagacccatggacaacctgtctggaggggagaagactgtagctgccctggctctg
ctgtttgccatacacagctacaagcctgccccattcttcgtcctggatgagattgatgct
gctctggacaacaccaacatcggcaaggtggccaactacattaaggaccagtctgtgaat
actcaggctatagtgatctctctgaaggaagagttctacaccaaggctgactcgctcata
ggggtctatccagagcaaggagattgcgtcatcagcaaagtactaacctttgacctgtct
gtgtaccatgacgccaaccccaatgagtag
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