KEGG   Salmo trutta (river trout): 115165541
Entry
115165541         CDS       T08542                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1-like isoform X1
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
stru  Salmo trutta (river trout)
Pathway
stru03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:stru00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    115165541
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:stru03019]
    115165541
   03041 Spliceosome [BR:stru03041]
    115165541
Messenger RNA biogenesis [BR:stru03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     115165541
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     115165541
Spliceosome [BR:stru03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    115165541
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 Nup35_RRM_2
Other DBs
NCBI-GeneID: 115165541
NCBI-ProteinID: XP_029574588
Ensembl: ENSSTUG00000033933
LinkDB
Position
28:13899186..13904224
AA seq 397 aa
MSKEAPREPEQLRKLFIGGLSFETTDESLRAHFEQWGSLTDCVVMRDPANKRSRGFGFVT
YAGVNEVDAAMEARPHKVDGRLVEPKRAVSREDSSRPGAHVTVKKIFVGGIKEDTEDSHL
RDYFEQFGKIEVIDIMTDRNSGKKRGFAFVTFDDHDAVDRIVIQKYHTLNGHNCEVRKAL
SRQEMQTTGMGMRGGRGGGGGGGNYGRGGGYGGDADSSVSGGRGGGYGGGDGGYNNGYGG
GDGGYGGGPGGYGGGNRGYGGGQGGYGGGQGGGYGGGNGYNDYNNGNGNGGNFGGGKSMA
SPQEAAPVAGNFGGGGGGNGGGNGYNDFGSYNNQASNYGPMKGNNFGGSSGGGSGGGSGG
GSSGGRNSGPYGGGYGGSSGGGGGGGGYGGGSGGRRF
NT seq 1194 nt   +upstreamnt  +downstreamnt
atgtcgaaggaggccccacgtgaacccgagcagctccgcaagctgttcatcggaggtctg
agcttcgaaaccacggatgagagtttgcgagcacacttcgaacaatggggatctcttaca
gattgtgtggtaatgagagatccagccaacaagcgctccagggggtttgggtttgtcacc
tatgctggtgtgaatgaggttgatgctgccatggaagcacgtccccataaggttgatggt
aggctcgtagagccgaagagggcagtgtccagagaggactccagccgaccaggtgctcac
gtcacagtgaaaaaaatatttgttgggggtatcaaggaagacacagaagactcccacctg
cgagactactttgagcaatttggcaagattgaagtaattgacattatgactgaccgcaac
agtggcaagaagaggggcttcgcctttgtcacgtttgatgaccatgatgcagtggacagg
attgttattcagaagtaccacacactgaatggtcacaattgtgaagtgaggaaagcgttg
tccagacaggagatgcagactacaggaatgggtatgaggggtggccgtggtggtggtggc
ggcggcggcaactatggcagaggtgggggatacggaggtgacgctgactcgtctgtttca
ggaggcagagggggtggatatggaggtggagatggtggttacaacaatggttatggtgga
ggagatggtggctatggaggagggcccggtggttatggtggtggtaaccgtggctatggt
ggaggacaaggaggttatggcggaggacagggtggtggctacggtggcggaaatggttat
aacgactacaacaatggcaatggcaacggtggaaactttggcggcggtaagtccatggcc
tcaccacaagaggcagcaccagttgctggtaacttcggcggcggtggtggcggcaatggt
ggcggcaacggctacaatgactttggcagctacaacaatcaggcttccaactatggcccg
atgaagggtaacaactttgggggtagcagtggtggtggcagcggcggtggcagtggcggg
ggtagcagcggtggcaggaacagtggcccatatggtggtggttatggaggtagctcaggt
gggggtggcggcggtggcggatatggcgggggctccggtggacgcagattctaa

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