Salmo trutta (river trout): 115165605
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Entry
115165605 CDS
T08542
Name
(RefSeq) telomere zinc finger-associated protein-like isoform X1
KO
K10519
zinc finger and BTB domain-containing protein 48
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115165605
04121 Ubiquitin system [BR:
stru04121
]
115165605
Transcription factors [BR:
stru03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
115165605
Ubiquitin system [BR:
stru04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
115165605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
BTB
zf-C2H2_15
BTB_KLHL33
zf-C2HC_2
zf-C2H2_jaz
zf-C2H2_11
zf-C2H2_6
zf-C2H2_ZNF462
TRAF6_Z2
TSTD2_N
Motif
Other DBs
NCBI-GeneID:
115165605
NCBI-ProteinID:
XP_029574679
Ensembl:
ENSSTUG00000032078
LinkDB
All DBs
Position
28:15837711..15855840
Genome browser
AA seq
823 aa
AA seq
DB search
MHTKVSSNHAQRILSFLNEQRSLSSFCDAKLTVGGGGRVYNAHRNILACFSGRFQESEPT
TTMVKEVSLPEEFPTDGLELLLDFIYTGELNLDSLNLENVRQAADSLCVPDALALCQQFA
TEGTVSPEGLQSACLLSHHFQPISAVTYVETKATLKRGRPPKKRGRPKKSETPSSGSSKK
DRLEPTATTTAITTRSGSRVKASRRPLGEGPGVHLLPHGGTTSRGTPPLAISLKDRSDGA
EEEGQSLPQPTDPSEVTDVFGSLVPDLSNKANSHLQPLDEEDYDDDDGGGGDLVEGVAED
TDEEYVPHALPPTSSTPKGRRKGPTKAVNKENGEQAAKGSTKGSVQCPTCNKTFLSKYYL
KVHNRCHTGEKPFPCSKCGRRYYRKENLMDHQARNCNCGEKIKAVHNCLQCHMSFDRLGD
LRLHTVSHTGEMPNKCTSCSEQFMHKKDLRSHEIKIHGAPKPHACSLCSKAYLSKTELRL
HEASKHRGEKLFVCEECDHRASSRHGLQMHIKAIHRNERPFVCEYCNRAFTQKANLNMHL
RVHTGEKPHQCHLCGKTFRTQASLDKHHRTHTGERPYSCEFCNQRFTEKGPMLRHVASKH
QEDRPHCCKICGKTFKAVEQLHVHVRRHQGMRKFECEKCGYKFTRQAHLRRHVQVHTRTE
NYNPRERKLRNLIVKDVGLQDETSPSQIPPTEETPEGPAPVSGPSVPVSVPVSGPIPGPG
TVLGASDILRVVIQPLTEEVVSSQGQMEVGFNQDQVGFTQVGLAQGHGQVDVMSISQGLG
VVGHSFNVTDVMEQTLLVADYPIPETTVELEDIQEDHPDKSKA
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgcatacaaaggtgagtagcaaccatgcccaacggattttgtcctttctgaatgagcag
aggagtctcagctcgttctgtgatgccaaactgactgtaggaggaggtgggagggtgtac
aatgcccatcgcaatatcctggcctgtttcagtgggcggttccaggagtccgagccaacc
accaccatggttaaggaggtctccctcccagaggagttccccactgatggcctggaactg
cttctagactttatctatacaggggagttaaaccttgactctctgaatctggagaatgtg
cgacaggctgcagacagcctatgtgtaccagatgcgctcgcactttgtcagcagtttgcc
acagaagggacagtttctccagaaggactgcagtctgcatgtcttctgagccatcatttt
cagccaatctcagctgtaacttatgtggaaaccaaggccaccctaaaaagagggaggccc
cctaaaaaaagagggaggcccaaaaaatccgaaacccctagtagcggctcaagtaagaag
gatcgtctggaacctaccgccactacaactgccatcacaactcgctctgggagtagggtg
aaggcctccagaagaccgcttggagagggccccggggtgcatctcctgccccatgggggg
accactagcagggggactccaccactagctattagcctaaaggataggagtgatggggct
gaggaggagggacaaagcctccctcagcctacagatccatcagaggtaacagatgtgttc
ggcagccttgtaccagatttgagcaacaaagctaattctcatctgcagcctcttgatgaa
gaagactatgatgatgatgatggcggtggtggtgatttggtggagggagtagctgaggac
actgatgaagagtatgtgccccatgccctgccgcctacctcctccacccccaaaggcaga
cgtaaaggaccaaccaaagctgtcaataaagagaacggtgaacaggcagccaaggggtct
acaaagggctctgttcagtgccccacctgcaataagaccttcctcagcaagtattatctc
aaagtacacaacaggtgtcatacaggtgagaagccctttccatgctctaagtgtgggagg
aggtactacaggaaggagaatctgatggaccaccaggccagaaactgcaactgtggtgaa
aaaataaaagcggtacacaactgccttcaatgccacatgtcatttgacagattgggggat
ctacgtctgcacacggtctctcatacaggggaaatgcccaataagtgtacgtcatgctcg
gaacagttcatgcataaaaaagatttaagaagtcacgaaatcaaaatccacggtgcaccc
aaaccacatgcatgctctctgtgcagcaaagcatacctgtctaaaacagagctgcgtctg
catgaggcgtccaagcatcgcggcgagaagctttttgtgtgtgaggagtgtgaccatcga
gcctccagccgacacggcctgcagatgcatatcaaagccattcacagaaacgagcgccca
tttgtgtgtgagtactgcaaccgtgcgttcacccagaaggctaaccttaacatgcacttg
cgggttcacactggagagaagccccatcagtgccacctctgtgggaagaccttccggaca
caagccagtcttgacaagcaccaccgcacccacacgggagagcgaccttacagctgtgag
ttctgtaaccagcgcttcacagagaagggaccaatgctccgccatgttgccagcaagcac
caggaggaccgccctcactgttgcaagatatgtggcaagaccttcaaggccgtcgagcag
ctccacgtccatgtgcgtcgccatcagggcatgaggaagtttgagtgcgaaaagtgtggc
tacaagtttaccagacaggctcacttacggcgtcatgttcaggtccacacccgtacagag
aactacaatccacgggagagaaagctacggaaccttatagtaaaggacgtggggttgcag
gatgagactagcccctcacagataccacccactgaggagacacccgaggggccagcgcct
gtctctggacccagtgtcccagtctctgttcctgtctctggacctatacctggacctgga
actgtactaggagccagtgacatcctcagggtggtgatccagccccttacggaggaggtg
gtgtccagccaagggcagatggaggtgggttttaaccaggaccaagtgggctttacccag
gttgggttggcacagggacatggacaggtggatgtgatgtccatcagccagggtttgggt
gtggtggggcatagcttcaatgtgacagatgtgatggagcagactctcctggtcgcagat
taccccatccctgagaccacggtggagctggaggacatacaggaggatcatcctgataag
agcaaggcctga
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