Salmo trutta (river trout): 115165723
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Entry
115165723 CDS
T08542
Name
(RefSeq) double-strand-break repair protein rad21 homolog isoform X1
KO
K06670
cohesin complex subunit SCC1
Organism
stru
Salmo trutta (river trout)
Pathway
stru04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
115165723
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
stru03036
]
115165723
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
115165723
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad21_Rec8_N
Rad21_Rec8
SMC_ScpA
CCDC-167
Motif
Other DBs
NCBI-GeneID:
115165723
NCBI-ProteinID:
XP_029574891
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Position
28:19473958..19483746
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AA seq
556 aa
AA seq
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MMFYTQLFTSKRGPLAKIWLAAHWERKITRTHVFECNLESTIKHIISPQTNIGLRTFGHL
LLGVVRIYFRKAKYLLADCNDAVVKIKVAFRPGQTDMPVEGLEATLKAITLMEDFTDFDT
QLPDTNAIGVVDHFSLNQCRTEDITLKEDFGNSFLTFDDFGDETQSHQGGMLDVSFLSLA
QHGDAFGDEDKGIDILDFMASSSENAFLTDLFPAEPQNVMPEIAPTNINQEGRPDSPTSV
PMEEDRPVLNETTPVLNETTLLVNEEEGFALEPVAVTPTLKRKKGKRRRRLVVDQAKELS
NQAIREQLTDDSDLTAPLDLAPPTHQLMQWKESGGVDRLFSHLCAPVIHPHLQQLYSSDV
FRGETDRVGNEDDREEMRQERHEVESDVSDLPSELSVLHETMDPERMGHNVELTPLHHHG
TDNPPEDVWDEVHDESRFEVPHPELPSEDSMHVHPSGMERETPLNVTQNTQSMVDSQDDF
EERRMTSQAQKLLNALKIQSSRSNAMFSLQTLCERNSRSQTSATFFCLLVLKKQQALDLH
QSEPYADIIATPGLRF
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgatgttctacactcagctcttcacttccaaacgcggacctctggccaaaatctggcta
gcagctcattgggagcgcaaaatcaccagaactcatgtgtttgaatgcaatttggagagc
accatcaaacacataatctccccacagacaaatatcggcttgcggacttttggccaccta
ctcctgggagtagtgaggatatacttcagaaaagccaaatatctgcttgctgactgcaat
gacgctgttgtcaaaattaaagtagccttcagaccaggacagactgacatgcctgttgaa
ggactggaggccacacttaaagccatcacgttgatggaggatttcactgacttcgatacc
cagctaccagacacaaatgccataggtgttgtggaccatttttcactgaatcagtgccga
acagaggacatcaccctcaaagaggattttggaaatagctttctcacatttgatgacttt
ggtgatgagacccagtctcaccaagggggcatgttagatgtgagtttcctaagcctggcc
cagcacggagatgcttttggcgacgaggacaaaggcattgacatcttggacttcatggcc
agttccagtgagaatgcttttttgacggaccttttcccagccgaaccacaaaatgtgatg
ccagagattgctcccacgaacattaaccaagaaggtcgtccagactctcctacatctgta
cccatggaggaggatcgccctgtcctgaatgagaccacccctgtcctgaatgagacgact
ctgttggtcaatgaggaggagggcttcgctctggagcctgtcgctgtgaccccgacctta
aagaggaagaaggggaagaggagaaggagactggtggtggaccaggccaaggagctgtcc
aaccaggccatcagggagcagctcactgacgattcagatctcactgccccactggactta
gccccacccacccaccaactaatgcaatggaaagagagtggtggggtggacaggctcttc
agtcacctctgtgcccctgtcattcatccacaccttcaacagctctattccagtgatgtg
tttcggggggaaacagatcgagtgggcaatgaagatgaccgtgaagagatgagacaggag
agacatgaggtggaaagcgatgtgagcgacctgcccagtgagctcagtgtcctgcatgag
actatggatcctgagagaatgggacacaatgtggagctcactcctctgcaccaccatggg
actgacaacccacctgaggacgtctgggacgaagtacatgatgagagtagatttgaggtt
cctcaccctgagcttccttcggaggattccatgcatgttcatccttctggaatggagagg
gaaactccattgaatgtgacacagaacacacagtctatggtggacagccaggatgacttt
gaggagaggaggatgaccagccaagcacagaaactactaaacgctctcaaaattcagagc
agcagaagcaacgccatgttcagcctgcagacgctgtgtgagaggaacagtcgctcccag
acctcggctaccttcttttgcctcctggtgctgaagaaacagcaggccctggatctgcac
cagagtgagccttacgctgacattatagccacacctggactcaggttctaa
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