KEGG   Salmo trutta (river trout): 115165890
Entry
115165890         CDS       T08542                                 
Name
(RefSeq) pre-mRNA-splicing factor SPF27-like
  KO
K12861  pre-mRNA-splicing factor SPF27
Organism
stru  Salmo trutta (river trout)
Pathway
stru03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:stru00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    115165890
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:stru03041]
    115165890
   03400 DNA repair and recombination proteins [BR:stru03400]
    115165890
Spliceosome [BR:stru03041]
 Complex B
  Other components
   Prp19 complex
    115165890
 Complex C
   Prp19-CDC5 complex
    115165890
DNA repair and recombination proteins [BR:stru03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    115165890
SSDB
Motif
Pfam: BCAS2 THOC7 RRP36 Flagellar_rod
Other DBs
NCBI-GeneID: 115165890
NCBI-ProteinID: XP_029575215
Ensembl: ENSSTUG00000026929
UniProt: A0A674ASE4
LinkDB
Position
28:26287579..26295094
AA seq 225 aa
MAGTSSVAGEVFVDALPYFDQGYDATGVREAAAALVEEETRRYRPTKNYLSYMPTPDFTT
FETEIMRNEFERLAARQPLELLSMKRYELPAPSSGQKNDITAWQESVNNSMAQLEHQAVR
IENLELMAHYGTNAWKVYNDNLAFMIELAQKELQKCRKQIQDLNWQRKNDQLAGGAKLRE
LESNWVSLVSKNYEIERAIVQLENEVGQLKQQRGDENKENIRQDF
NT seq 678 nt   +upstreamnt  +downstreamnt
atggctggaacttcatcagtagctggtgaagtatttgtcgatgccctaccgtattttgac
cagggttatgatgcaacgggcgttagagaggcggctgcagccttggtagaggaggagact
cgccgatacagacccaccaagaactacctcagttatatgccaacacctgatttcactaca
tttgaaactgaaatcatgaggaacgagtttgagaggctagcagcccggcagcccctggaa
cttctcagcatgaagagatatgagcttccagctccatcatcagggcagaagaatgacatc
actgcatggcaggagagtgtgaacaactccatggctcagctggagcatcaagcagtgcga
attgagaacctggaacttatggcacactacggtaccaatgcatggaaggtctacaatgat
aacctggcctttatgattgaattggcacaaaaagaactacagaaatgtagaaagcagatt
caggacttgaactggcaacggaagaatgatcagcttgcaggcggggccaagctgagagag
ctggagtcaaattgggtgtccctcgtaagtaagaactatgagattgaacgtgccatcgtc
cagttggagaatgaagttggacagctcaaacagcagcgtggtgacgagaacaaggaaaac
attcgacaggacttctag

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