Salmo trutta (river trout): 115165913
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Entry
115165913 CDS
T08542
Symbol
clstn1
Name
(RefSeq) calsyntenin-1 isoform X1
KO
K22659
calsyntenin 1
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
stru04515
]
115165913 (clstn1)
Cell adhesion molecules [BR:
stru04515
]
Cadherins
Cadherin related
115165913 (clstn1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
CDC45
Laminin_G_3
Laminin_G_2
Toxin_R_bind_N
Cadherin_pro
Cadherin_C_2
EphA2_TM
PFF1_TM
TMEM132_C
Motif
Other DBs
NCBI-GeneID:
115165913
NCBI-ProteinID:
XP_029575259
Ensembl:
ENSSTUG00000034081
UniProt:
A0A674CHG9
LinkDB
All DBs
Position
28:26685086..26755168
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AA seq
984 aa
AA seq
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MQIRRYKHFASVVGLVLGLLCAVEAAKVNKHKPWIETTYHGIVTENDDKVLLDPPLIALD
KDAPLRYAESFEVTFTKEGEICGFRIHGQNVPFEAVVLDKSTGEGVIRAKDKLDCELQKE
HTFTIQAYDCGEGPDGANMKKSHKATVHIQVNDINEYSPVFKEKSYKATVIEGKKYDSIL
KVEAVDADCSFQFSQICSYEIVTPDVPFTVDKDGFIKNTEKLNYSKERMYKLTVTAYDCG
KNRASEDVLVKINIKPTCKPGWQGFNKRIEYEPGTGSLALFPSMHLETCEEPITSIQANI
ELETNHIGKGCDRDTYSEKSLHKLCGASAGTVELLPAPSSSANWTVGLPTDNGHDSDQVF
EFNGTQAIKVPEGVVSTSLKEPFTVSVWMRHGPGAREKETILCNSDKTEMNRHHYSLYVH
NCHLILLLRQDPAETENYKPAEFHWKLDQVCDKEWHHYVLNVEFPSVALFVDGATFEPFL
VTEDYPLHSSKIDMQLTIGACWQDNPGHDKDNETVSEPSTGGNARMSQFFRGNLAGLMIR
SGKLENKKVIDCLYTCKEGLDVQLPEEVASAVKVAFNPNQSSLTVEGDDIEAFDKVMQHI
SYLNSRQFPTPGIRHLRVSTTVKCFNEETCILVPEAAGYVMVLQPEEPKISLSGIDHFAR
GAAEFESPEGVTLFPELRIVSTITREVEAETEPEATEATEGAEDDPTVQETVVSEEIMHN
LDTCEVTALGDELDGEHETLEVDQAQVQQRGLEMTSSNLGLVMTGVNTMANYEQVLHLIR
YKNWHTEALFDRKFKLFCSELNGRYISNDFKVEVNVIHTANPMDHANNAMVQPNFISPVH
HASVDLSGHNLVNAHQASVVPSAATIVIVVCVSFLVFMIILGVFRIRSAHQRTMRDTEGG
KENEMDWDDSALTITVNPMETYEDQHSSEEEEEEEEESEEGEEEDDITSAESESSEDEEA
GEPEDQQGASRQQQLEWDDSTLTY
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcagaaggtataaacattttgcatccgttgtcggactggtcctcggactatta
tgcgcggtggaggcagctaaagttaataagcacaagccatggattgagacgacgtatcat
ggcatcgtaacagaaaatgacgacaaagtacttctggaccctccacttatcgccctggac
aaagacgccccgctgcgctacgcagaaagttttgaggtgaccttcaccaaagaaggtgag
atttgtggcttcaggatccatgggcagaatgttccctttgaggcagtggtcctggacaag
tccacgggtgagggagtcattcgagctaaggacaagctggactgtgaactccagaaggag
cacaccttcaccatccaggcctatgactgtggagagggccccgacggagccaacatgaag
aaatctcacaaggccaccgtccacatccaagtgaacgacatcaacgagtattccccagtg
ttcaaggagaagtcctacaaagccacggtcatcgagggtaagaagtatgacagcatcctg
aaggtggaggcagtggatgccgactgctcattccagtttagccaaatctgcagctacgag
atcgtcaccccagatgtgcccttcactgttgacaaggatggcttcatcaagaacacagag
aagctgaactacagcaaagagcgcatgtacaaactgacggtgactgcctacgactgtggg
aagaaccgcgcctcagaagatgtgctggtcaagatcaacattaagcccacctgcaagccc
ggctggcaaggtttcaacaagaggattgagtacgagcctggcacaggcagtctggccctt
ttccccagcatgcacttggagacctgcgaagagccaatcacctccatccaggccaacatc
gagctggagaccaatcacatcggaaagggctgcgaccgagacacctactctgagaagtcc
ctgcacaagctatgtggcgccagcgctggcacggtggaattactgcctgcaccaagcagc
tctgccaactggacggtgggtctgcccacagacaatgggcatgacagcgaccaggtgttt
gagttcaacggcacccaggccataaaggtgcccgagggcgtggtgagcaccagcctgaag
gagcccttcaccgtctctgtgtggatgaggcacggccccggggccagggagaaggagacc
atcctctgtaactcggacaagaccgagatgaacagacaccactactccctctacgtccac
aactgtcacctcatcctgctgctgcgtcaggaccccgcagagacggagaactacaaacca
gcggagttccactggaaactggaccaggtgtgtgacaaagagtggcaccactacgtgctg
aacgtggagttcccctccgtggctctctttgtagacggggccaccttcgagcccttcctg
gtcaccgaagactaccccctgcactcctccaagatcgacatgcagctcactatcggggcc
tgctggcaagacaacccaggacatgacaaagacaatgagacagtctctgagccttccaca
ggcggcaacgctcgcatgtcccagtttttccgggggaatctagccggcctgatgatccgt
tcgggaaagctggaaaacaagaaggtgatcgactgcctgtatacctgcaaggagggcctg
gatgtgcagctgcctgaggaggtggcctctgccgtcaaggtggcgttcaaccccaaccag
tcgtcgctgaccgtggaaggcgatgacattgaggctttcgacaaggtcatgcagcacatc
tcctacctgaactcacgccagttccccacccccggcattcgacacctccgcgtctccacc
accgtcaagtgcttcaatgaggagacgtgcatcttggtaccggaagcggcgggatacgtg
atggtgctgcagcccgaggagcccaagatcagcctgagtggcatcgaccactttgcccgc
ggcgctgcagagtttgagagccctgagggcgtgactctgttccccgagctgcgcatcgtc
agcaccatcacccgcgaggttgaggctgaaaccgagccagaggccacagaggccacagag
ggggcagaggacgaccccacagttcaagagacggtagtgtcggaggagatcatgcacaac
ctggacacatgtgaggtgacggcgctgggcgatgagctggacggagagcatgagaccttg
gaggtggaccaggcccaggtccagcagcgcggcctggagatgacctcctccaacctgggt
cttgtcatgacaggcgtcaacaccatggccaactatgagcaggtcctgcacctgattcgc
tacaagaactggcacacagaggctctctttgacaggaagttcaagctgttctgctccgaa
ctcaacggccgctacatcagcaacgacttcaaggtcgaggtcaatgtgatccacacagcc
aaccccatggaccacgctaataatgccatggtgcagcccaatttcatcagcccagtgcac
cacgcctctgtggacctgtctggacacaacctggtcaacgctcaccaggcttcagtggtc
cccagtgccgccaccatcgtcattgtggtgtgtgtcagcttcctggtgttcatgatcatc
ctgggcgtgttccggatccggtcagcccaccagcgcaccatgagggacacagagggcggc
aaggagaatgagatggactgggatgactcggccctcaccatcacagtcaaccccatggag
acttatgaggaccagcacagcagtgaggaggaggaagaagaagaggaggagagcgaggaa
ggcgaggaggaagacgacatcacaagtgctgagtcggagagcagcgaggatgaggaggcc
ggagagccagaggaccagcagggtgccagcagacagcagcagctggagtgggacgactcc
acactcacctactaa
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