Salmo trutta (river trout): 115165921
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Entry
115165921 CDS
T08542
Symbol
casz1
Name
(RefSeq) zinc finger protein castor homolog 1 isoform X1
KO
K25209
zinc finger protein castor
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115165921 (casz1)
Transcription factors [BR:
stru03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
115165921 (casz1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2_CASZ1
zf-C2H2_CASZ1_1
Phage_YorO
Motif
Other DBs
NCBI-GeneID:
115165921
NCBI-ProteinID:
XP_029575289
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All DBs
Position
28:27076609..27333780
Genome browser
AA seq
2086 aa
AA seq
DB search
MPCFVERILPEQEGEVRHNTEGGLLPAERTLCTEKTSGKSNMAGKRKGGLKLNAICAKLS
RQVVYDGSSQHAEGDHSVAENSERGSSHYDDSGERFETNFPEGLSLGHSLEEDQKRRKAI
EKWVNGEYGDEPPPSALDCGEEQQQQQGLKPNNGEDGPPEGVYMVQPKGCSDEEDNALDE
PEPMFDSRDGSYHDDKDSEDGPQKDVYMPLISEPPSRQTSFSSPGEASTLRDYAANTMNE
FLGMFGYDDQQVRDELAKKISFEKLKAATSGSDPSSLSSEEATRRARFSKYEEYIRKLKA
GETLPWPIHTNPKQEDLNSKLAQEKNALLQAQMAASGGCHSGAEGQIYHSSLDHKQGQGQ
GHNLGRNPPPPNPTSHLQNMASRASKYDFFIQKLKMGESLRSQQNGNAYKKPSKYDLENV
RYLHLFKPGDGNTDMGGAIAYKTGKVGRPSKYDIKNIQKLMPGRPESSLIPSVLPATPGN
PGTPVAATSASSAGATGPPGLIMDQTGHMGFNTSDYMKSSFSKTDSITTGTVSSVKNGLP
PEKPVTEDVNLYQKYIARSRQTFPKPLPPPPPPPYPEPPTTPPTFKRFSGSQHCGHVHCA
YQYREHYHCMDTECNYQRFTSKQDVIRHYNMHKKRDNSLQHGFMRFSPLDDCSVYYHGCH
LNGKSTHYHCMQVGCNKVYTSTSDVMTHENFHKKNAQLINDGFQRFRATEDCGTVECQFY
GQKTTHFHCRRPGCTFTFKNKCDIEKHKSYHIKDDAYAKDGFKKFYKYEECKYEGCVYSK
ATNHFHCIRSSCGFTFTSTSQMTSHKRKHERRHIRSSGVMALSSGGSFLMPKEEPGDESS
NDDLMDFSAISSKNSSLSASPTTQQSSNGPGAHLLATPTTVMSSSSGGHSGLKPTSSLPH
SARMSSLLSQALPSNMPVALALSNSALASVNNPFFPLMPRLPMQLPHSAASLISAVSSGA
HSMPTDSLSQGGCSSAGSDGAMASTPTSYASASSIMEKISASKGLISPMMARLAAAALKP
SGNHQDTGNGLAGSSASLFNLVQVKQEPVDHTSGASQDSIQEHSLDLSKKDHSNESNGHP
VPGNTSLLSSLMNKMNAGFFSALNLKTEMEIGQGADTSEAAQYLSRIMKRPMPDKPSELW
RTYLRRFDTEDFCEAQCDFLQKVHFHCLVEDCGALFSTMDGAIKHANFHLRATLKVKSEP
HFNKVKDCGDGASHQSTAPVSMANNPAMDVANMSSSSGGGYGSSPSLLAWKQLTGSIPQL
NASMPNLPANSPLATTSLENAKPQVKPGFLQFQDNSYSDPCLATDCKYSNKVHFHCLFGN
CKYVCKTSGKAESHCLDHINPNNHLVNVRDQFSYFSLQCLCPNQHCEFRMRGHYHCLRSG
CYFVTNITTKLPWHVKKHEKAERRAANGFKYFTKREECGRLGCKYNQVNSHFHCIRESCQ
FSFLLKHQMTSHSRKHMRRMLGKNFDRVPSQVVSHGQRADDMQHLSGMGSGLMGSHPGMT
HGFSSMMDETDDYMDYMGGGSPLCLSSESSNQDRSCSSTPVGNESSPAGPGCPVTTASST
PADTSAPQNAPPPPPPPQPGLQSQAPSFPPALLRPPLPSLPYLVSPSCLSYSLLSASLGA
TRSVVMPTNTPAFSPIIATPSPVKNDVPIVQDAAGNTISIPTATGAKKRFWIIEDMSPFG
KRRKTASARKMLDEGMMLEGFRRYDLYEDCKDSGCQFSLKVTHYHCTRENCGYKFCGRTH
MYKHAQHHDRVDNLVLDDFKRFKSSLSCNFSDCQFSGNSTHFHCLRCSFRCTDSTKVTAH
RKHHGKQDVISAAGFCQFSSSADCEVADCKYKLKCSHFHCTYPECKHTVVGMSQMDSHKR
KHEKQERGELPSVSPRQEGAHHMTGGVSAVPHASLGLLPASPGGLPGLSHHHHHHHNNNN
HAPSMLYPPASVASDYNYPYPTSSVSLDSSLNLGTDTSNSLFFLKNAAGLGLNDSLDLSK
KMQHHHDPSLTMAAGPSPMPPLGLPAPQDDTTGTSGDPEDDQSPEEEANAEEDEEDEDEA
EEDLNTDSYEDSMPQPDGDNKDNDESFDASLNHTDTSQLEKQEADP
NT seq
6261 nt
NT seq
+upstream
nt +downstream
nt
atgccttgctttgtggagagaattcttccagagcaggagggagaggtgagacataacaca
gagggcggtctcctgccagctgaaaggactttatgcactgaaaagacctcaggaaaatcc
aacatggccggcaaaaggaaaggtggcctaaaactcaacgcaatctgtgccaagctgagc
cgtcaggtggtgtacgatggcagctcccagcatgctgagggagaccacagcgtggcggag
aacagcgagcgcgggagctcccattatgacgacagtggcgagcgattcgagaccaacttc
cccgagggcctgagtctcggccacagcctcgaagaggaccagaaacggcgcaaggccatt
gagaagtgggtcaacggggagtacggggatgaaccaccaccctccgccctggactgtggg
gaggaacagcagcaacagcagggactcaagcccaacaatggcgaggacggaccccccgag
ggtgtgtacatggtacagcccaagggctgcagtgacgaggaggacaacgcgcttgatgag
cccgaacccatgttcgactcccgggacggcagttaccacgacgacaaggactcggaagac
gggcctcaaaaggacgtctacatgccgttgataagtgagcccccgagtcgccaaacatct
ttctcctctccaggagaggcgtccactctgcgagactacgcagccaacacaatgaacgag
ttcctgggcatgttcggctacgatgaccagcaggtgagggacgagctggccaagaagatc
agcttcgagaagctcaaagccgctacctcaggctccgacccatcctccctgagcagcgag
gaggccacgcggcgagcccgcttttccaagtatgaggagtacatccgcaagctgaaggct
ggcgagaccctgccctggcccatccacaccaaccccaaacaagaagacctcaactcaaag
ctggcccaggagaagaatgccctgctccaggcccagatggccgcctctggggggtgccat
tccggggctgagggccagatttatcactccagcctggaccacaagcaggggcaagggcag
gggcacaaccttgggcgcaatcccccaccacccaaccccacctcccacctccagaacatg
gcctcccgagcctccaagtacgacttcttcatccagaagctgaagatgggtgaaagcctg
cggagccagcagaatggcaatgcctacaagaagccatccaagtacgacctggagaacgtc
cggtacctgcacctcttcaagcccggcgacgggaacactgacatggggggcgccatcgcc
tataaaacggggaaggtgggccgcccgtccaagtacgacatcaagaacatccagaagctg
atgccggggagacccgagtcctcgctgattcccagcgttctgcctgccacacctgggaac
ccggggacaccagtggccgccacctcggcctcctccgctggggccacgggccccccagga
ctcatcatggatcagacaggccacatgggcttcaacacctctgactacatgaagtctagc
ttctccaagaccgactccatcaccacgggcactgtgtcctctgtcaagaacggcctacca
cctgagaaacccgtcacagaggacgtcaacctgtaccagaaatatatcgccagaagccgt
caaaccttcccgaagcccctaccaccaccaccaccaccaccataccctgagccccccacc
acaccaccaacttttaaaaggttctcggggagccagcactgcggacatgtgcattgtgcc
taccaatacagggagcattaccactgcatggacacggagtgcaactaccagaggttcacc
agcaagcaagacgtgatcaggcactacaatatgcacaagaagagggacaactccctacag
catggcttcatgcgcttcagcccactggacgactgtagcgtctactaccatggctgccac
ctcaacgggaagagcacccactaccactgcatgcaggtgggctgcaacaaggtatacacc
agcacctccgatgtcatgactcacgagaacttccataagaagaacgcccagctgatcaac
gatggctttcagaggtttcgtgccactgaggattgtgggacggtggagtgccaattctac
gggcagaagaccacccacttccactgcaggcgcccggggtgcaccttcaccttcaagaac
aagtgtgacattgagaagcacaagagctaccacatcaaggatgacgcgtatgccaaggat
ggcttcaagaagttctacaagtatgaggagtgcaaatacgagggctgtgtctacagcaag
gccaccaaccacttccactgcatccgctcgagctgcggcttcaccttcacctccaccagc
cagatgacctcccacaagcgcaagcacgagcgccgccacatccgctcctcaggcgtcatg
gccctctcctcgggcggctccttcctgatgcccaaggaggaacccggagacgagtcgagc
aacgacgacctcatggacttctcggccatcagcagcaagaactccagcctgagcgcctcg
cccaccacccagcagtcgtccaacggtcccggcgcccacttgcttgccacacccaccacg
gtgatgtcgtcctccagcggcggccacagcggcctcaagcccacctcctcgctgccgcac
tcggcacgcatgtcaagcctgctatcccaggcactgcccagcaacatgcctgtggcactg
gcgctgtccaacagcgccctcgccagcgtcaacaatcccttcttcccgctcatgccccgg
ctgcccatgcagctgccccattcggccgccagcctgatctcggccgtgtcgtctggcgcc
cactccatgcccaccgactcactgtcccagggtggctgctcctcggcgggcagcgatggc
gccatggcatccacgccgacctcctacgcctcggcctcttccatcatggagaagatctct
gctagcaagggcctcatatccccaatgatggccaggctggcagcagctgccctcaagccc
tctggcaaccaccaagacacagggaatgggctggctggttcttcagcgagtctgttcaat
ctggttcaagtgaagcaggagccagtcgaccatacctccggggcctcccaggactccatc
caagagcacagcctggacctgagcaaaaaagaccacagtaatgaatcaaacggacaccct
gtaccgggaaatacatctcttttatcctcgcttatgaataagatgaatgccggcttcttc
agtgccctgaacctgaagacggagatggagatcggccaaggggccgacacctcagaggca
gcgcagtacttgagccgcatcatgaagaggcccatgccagacaaaccaagcgagctctgg
aggacatatctgcgcaggttcgacacggaggacttctgcgaggcccagtgtgacttcctg
cagaaggtccacttccattgtctagtggaggactgcggggcgctcttcagcacgatggac
ggagccattaaacacgccaacttccacctacgagccacgctgaaggtgaaatcagagcct
cacttcaacaaagtcaaggactgcggcgacggagcatcccaccagtccaccgcccctgtc
tccatggctaacaaccccgccatggacgtggccaacatgtcatcatcgtcaggcggcggc
tatggctcctccccctcactgctggcatggaagcagctgacgggcagcatcccacagctc
aatgcctccatgcctaacctgcctgccaactcgccgctggccaccacctctctggagaac
gccaagccacaggtcaaaccgggcttcctgcagttccaggacaattcatacagtgaccct
tgcctggccactgactgtaagtactccaacaaggtccacttccactgtctcttcgggaac
tgcaagtacgtctgcaagacctcggggaaggctgaatcccactgcttggaccacatcaac
cctaacaaccacctggtcaacgttcgagaccagttctcctacttctccctccagtgtcta
tgtcccaaccagcactgtgagttcagaatgaggggccattaccactgtctgcgatccggc
tgctactttgtcaccaacatcaccaccaagcttccctggcatgtcaagaagcatgaaaag
gcagagagacgcgccgccaatggcttcaaatacttcaccaagagagaggagtgtggcagg
ctaggctgcaagtacaaccaggtgaacagtcacttccactgcatccgcgagagctgccag
ttctccttcctgctcaagcaccagatgacctcgcactcccgcaaacacatgaggaggatg
ctgggaaagaactttgacagggttccatcccaggtggtgtcccatggccagagggccgat
gacatgcagcacttgtcgggcatgggctcgggcctcatgggcagccacccggggatgacc
catgggttctccagcatgatggacgagacggatgactacatggactacatgggcgggggc
agccccctgtgcctctcctctgagtcctccaatcaggaccgcagttgcagcagcaccccc
gtgggcaatgagagctccccagcaggaccaggctgcccggtcactactgcttcctctacc
cccgctgacactagcgctccccaaaacgcacctcctccaccacctcctcctcagcctgga
cttcagtctcaggctccatctttccctcctgccctcctccgacctcctcttccctcgctc
ccatatctcgtctctccatcctgtctatcatactctctgctcagcgcctctctcggagcc
actcggagtgttgtcatgccaaccaacacaccagctttcagccccatcattgccactccg
tctccggttaaaaatgacgtccctatagtgcaggatgctgcaggcaacaccatctccatc
cctacggccaccggcgccaagaaacgcttctggatcatcgaggacatgtcccccttcggc
aagcggcgcaagacggcttctgctcgcaaaatgctggacgagggcatgatgctggagggc
ttccgccgttatgacctgtacgaggactgcaaggactccggctgccagttctccctgaag
gtgacccactaccactgcacccgcgagaactgcggctacaagttctgcggccgcacgcac
atgtacaagcatgcgcagcaccacgaccgcgtggacaacctggtcttggacgacttcaag
cgtttcaagtcatcgctcagctgcaacttctccgactgccagttctccggcaacagcacc
cacttccactgcctgcgctgcagcttccgttgcacggacagcaccaaggtgacagcccac
cgcaaacaccatggcaagcaagatgtgatcagtgccgccggcttctgccagttcagctcc
agtgctgactgcgaggttgccgactgcaaatacaagctcaagtgctcacactttcactgc
acctaccccgagtgcaagcacactgtagtcggtatgtcccagatggactcccacaagcgc
aagcatgagaagcaggagcgcggcgagctgccgtcggtgtctccccgtcaggagggggcg
caccacatgacgggaggagtgtccgcggtgccccacgcctccttgggccttcttccagcc
tcgcccggtggcctcccaggactctcccaccaccaccatcaccaccataacaacaacaac
catgccccctccatgctctaccccccagccagcgtggcatctgactacaactacccctat
ccaacctcctcggtcagtctggacagttccctcaacctgggcaccgacaccagcaactcc
ctgttcttcctgaagaacgctgctggcctgggcctcaatgactcgctggacctgagcaaa
aagatgcagcatcaccatgacccgagcctgaccatggctgccgggcccagccccatgcca
ccgctaggcctgcccgctcctcaggatgacaccacgggaacatcgggcgaccccgaagat
gaccagtcacccgaggaagaggccaatgcagaggaagatgaggaggatgaggatgaggcg
gaggaggatctgaacactgactcgtatgaagattcaatgccacagcccgacggcgacaac
aaggacaatgacgagagttttgacgcttccttaaaccacactgacacttcccaactggaa
aagcaagaggccgacccatga
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integrated database retrieval system
