Salmo trutta (river trout): 115165928
Help
Entry
115165928 CDS
T08542
Name
(RefSeq) contactin-3-like
KO
K06761
contactin 3/4/5/6
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
stru04515
]
115165928
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
stru00537
]
115165928
Cell adhesion molecules [BR:
stru04515
]
Immunoglobulin superfamily
Contactins
115165928
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
stru00537
]
Others
115165928
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_DSCAM-DSCAML_C
V-set_CD47
Ig_4
Pur_ac_phosph_N
Interfer-bind
NDNF
Motif
Other DBs
NCBI-GeneID:
115165928
NCBI-ProteinID:
XP_029575306
LinkDB
All DBs
Position
28:complement(27623076..27700401)
Genome browser
AA seq
1025 aa
AA seq
DB search
MTLPWKQLLLLSIIDCLAECLDSGSFHGPRWRMEPSDLFIPVDSMEEEATLTCDAKGIPP
SQYRWSLNGTLINLELDHRRRLSGGNLIIRSLDRYQDGGRYQCTAYNTMGAVLSRRASLQ
FAYLDHFKLHTRSAVSVREGQGVVLLCGTPTSSGDLSYSWVFNEYPYFVQQDNRRFVSQE
TGNLYIAKVEPSDVGNYTCVVMNSITKGKVHSSPTSLVLRKDGVMGEYEPKIEVHFPDTV
PAAKGSVVTLECFALGNPVPEITWKRANGVPFPSKVKMKYSNAVLEIPSFQQDDTGGYEC
VAENKMGKNIATGRLAFHAKPQWIQTMRDTALAIEERLHWECRANGKPKPSYNWLKNGQV
LITEERVYVDNGVLLISSLNLSDAGMYQCVAENKYGVIYFSTELMVLASSPDFTGNLLRA
LLKAKAGTIVTLECKPQAYPTASILWKKGNQPIHTNDRITLSPDGTLRITNVTKYDAGSY
TCFARNRFGTSSTTGRLLVTDPTRITQGPVDMEIIVGESIVLPCQIACDPVLDVFFSWAF
NGQLITKTDRHFELVGGRTAGDLMIRNIQLNHAGKYICVVDTDVESLSAVAILIVKGPPG
PPDTVAVEEVTDSTAQLSWSRGRDNGSPITSYLIQTRTPFTVGWQRVDTVPEVIDGNTLT
ATVVDLNAWVEYEFRVVAKNSVGVGEPSPTSLQTRTEDAVPDAAPTDVGGGGGSRSELVV
TWEPVPEELQNGESFGYIIAFRGLGEMTWTHVATSAPGASRYVYRNDSIAPFSPFHVKVG
AYNSKGQGPFSPVVTIYSAEEEPSGMPGGVWARSVSASEIEVNWQALSFTPERVLGYEVV
YWEDDTKPETMGKVRVPGSQTSVTVSGLGRNTQYFLTVSAFNTAGTGPFLPAINATTKKS
PPGQPPLNVEWTLIGSQITIYWEPVVAMETESEVTGYQLSYRSLKHKEENMLLTNNSTAE
LTLVDNEDYVIHIRSLSEGGLGPATDPIRIHKLSMSARGSTAWSLNTSPVSLLLSIAFST
FRSTS
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgacgttaccatggaaacagcttcttctgctatcaatcatcgactgtctcgcagaatgt
ttggacagtggatcattccatggtccaagatggaggatggaacccagtgacttgtttatc
cctgttgattctatggaagaggaggccactcttacgtgtgacgctaaaggaatcccccct
tctcaatatagatggtcactgaatggaactctcataaatctggagttggaccaccggcgt
cggttgtctgggggcaacctcatcataagaagtctggaccgctaccaggatgggggacgg
taccagtgtacagcctataacacaatgggagccgttctcagcagaagagcaagcctacag
tttgcctacttggatcattttaaactccacacaagaagtgcggtgtcagttcgagaagga
caaggagttgtgttactctgtggaacacccacctcctcaggagatcttagttattcatgg
gtcttcaatgaatacccatacttcgtccagcaagacaaccggcgcttcgtatctcaggag
actggcaacctgtacatcgccaaagtggagccctcagatgtgggcaactatacctgtgtg
gtgatgaacagcatcacaaagggcaaagttcacagctcacccacatctctggtcctgagg
aaagacggagtaatgggagaatacgagccgaaaatagaagttcatttccccgacaccgta
ccagcagcaaaaggatcagtggttacactggagtgttttgctcttgggaaccctgtccct
gagattacgtggaagagggctaatggagtccctttccccagcaaagtgaagatgaagtac
tccaatgccgtcttggagatccccagcttccaacaggacgacacggggggctatgagtgt
gtggccgaaaacaagatggggaagaacatcgctacaggccgattggccttccatgccaaa
cctcagtggattcagaccatgagagacacggccctggccatagaggagaggcttcactgg
gagtgcagggccaacgggaagcccaaaccctcctacaactggctgaaaaatggccaagtg
ctgatcactgaggagagggtctacgttgacaacggggtcctgttgatctcgtctttgaac
ctgtctgatgccgggatgtaccagtgtgtggcagagaataaatatggtgtcatctatttc
agcactgagctcatggtcttagcctcttctccagacttcactggtaacctgctcagagcc
ctgcttaaagccaaggccggcaccatagtgactctagagtgtaagccccaagcctacccc
actgctagcatcctgtggaagaaaggcaaccaacccatccacaccaatgacagaatcact
ctctctccagatggaactttgagaatcactaatgtgaccaagtatgatgcaggcagctac
acctgctttgccagaaaccgatttgggacctccagcaccactggaagactcctcgtcaca
gatccaacaagaattactcaggggccagtggacatggagatcatagtgggtgagagcatc
gtgctgccctgccagatcgcctgtgaccctgtccttgacgtcttcttctcctgggctttc
aacggacagctcatcaccaagacagacagacattttgagctagtgggagggagaacagct
ggggatctgatgatcagaaacatccagttgaatcatgccgggaagtacatctgcgtggtg
gacacagacgtggagagcctgtcagcagtggccatattgattgtaaaaggcccccctggc
cctccagacacagtggcagtggaggaggtgacggacagcacagcccagctctcatggagc
cgcggcagggataacggcagccccatcaccagctaccttatccagaccaggacccccttc
actgtgggctggcaaagggtggacacagttcctgaggtaattgatggcaacacactgaca
gccacggtggtggatctcaatgcctgggtggagtacgagtttcgagttgtggcaaagaac
agcgtgggagtgggcgagcccagtcccacctctctccagacacggacagaggatgcagtt
cctgatgctgcacccactgatgttggaggagggggcggcagcagatcagagttggttgtt
acatgggagcctgttcccgaggaactgcagaacggtgagagcttcggttacattatcgcg
ttccgtggcctcggtgagatgacctggacccacgtcgccacctccgctccaggggcatcc
cgctatgtgtaccggaacgacagtatcgctcccttctcacccttccacgtgaaggtggga
gcctataacagcaaagggcagggcccgttcagtcctgtggtcaccatctactctgcagag
gaagagccgagtggtatgccagggggagtttgggccagaagtgtttccgcctcagaaatt
gaagtgaattggcaggctctatcctttactcctgaaagagttctcggctacgaggtggtg
tactgggaggatgacaccaagccagagacgatggggaaagtgagggtacctgggagtcaa
acctcggtcactgttagtggcttagggcgaaacactcagtattttctcacagtcagcgct
ttcaacacagctggtactggccctttcctccccgccatcaacgccaccaccaagaaatca
ccacctggacaacctcctctaaatgttgagtggaccttgattggctcccagatcactata
tactgggagccggtggtagccatggaaacagagtcagaggtcaccggttaccaactgtct
tataggagtctgaaacataaggaagagaacatgctcttgacaaacaattccacagccgag
ctgaccctcgttgacaacgaagactatgtcatccacataaggtcgctgagcgagggaggg
cttggcccagccacagatcccatccgcatccacaaactaagtatgagtgcgcgaggctcg
acggcctggagtctgaacacatcccctgtctctctgcttctcagcatcgcattttcaacg
ttcaggtctacatcgtga
DBGET
integrated database retrieval system
