Salmo trutta (river trout): 115165976
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Entry
115165976 CDS
T08542
Name
(RefSeq) laminin subunit beta-2-like isoform X1
KO
K06243
laminin, beta 2
Organism
stru
Salmo trutta (river trout)
Pathway
stru04510
Focal adhesion
stru04512
ECM-receptor interaction
stru04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115165976
04518 Integrin signaling
115165976
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
115165976
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
Alanine_zipper
BRE1
Motif
Other DBs
NCBI-GeneID:
115165976
NCBI-ProteinID:
XP_029575409
Ensembl:
ENSSTUG00000049320
LinkDB
All DBs
Position
28:complement(29868748..29920373)
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AA seq
1797 aa
AA seq
DB search
MHASLVMFICALAYATAREPDHAHGCTHGSCYPATGDLLVGREKSLKASSTCGSRKKDPY
CIVSHLQDEKKCFQCDSRRPYDPVYNTISHRIENVITTFKPHRKKSWWQSENGKPDVFIQ
LDLEAEFHFTHLIMIFKTFRPAAMVIERSADFGRNWQVYRYFAYDCASIFPGVSKGPLRK
VDDVICESRYSDIEPSTEGEAIYRVLDPAIHIEDPYSPNIQNQLKITNLRVNFTKLHTLG
DNLLDSRVEIKEKYYYAMYELVVRGNCFCYGHASECAPIDGIKDEEGMVHGRCVCKHNTK
GLNCELCDDFHSDMPWRPAEGRNTNACKKCNCNGHSSQCHFDMAVYLATGNAGGGVCDHC
LHNTMGRNCEMCKPFYYKDLSRDIRDPGVCTACDCDPDGSLNGGICDGHDEPSLGMIAGQ
CRCKDHVEGHRCDKCKSGFFGLSAANPRGCQPCQCDPRGTVSESPKCDPESGDCFCKRLV
TGRSCDQCLPEHWALSHDLNGCRDCDCDVGGATDNHCSMENGQCRCRSHMMGRQCTQVES
GWYFMALDHYTYEAELAILGQGCSVEQREHQPGRPATWTGTGFAKVPEGSSLEFSINNIP
YSMEYDLLIRYEPQMPRDWGEVRVTIIRPGPIPTSSPCGNTIPADDMLTVSLPAGSRFVV
LPTPVCMERGVSYTLRFEFSRYLDGNSILILGTTAANILVDSISLIPRYSSLEMFIGGDP
ASIARKQSFERYRCHEVAKSVTRSQISNVCAKLITSMSAIINHGALPCQCDPQGSVSSVC
DTHGGQCRCRPNVIGLRCDQCAPGTYGFGPAGCKACECNLEGAVTRSCDQLTGQCPCRPG
AFGQRCDGCQAGHWGFPNCKRCLCNGHAEECHQRTGACLNCRDNTGGDKCDRCANGYYGN
PVLGTGMGNQCRPCPCPDGPNSGRHFAASCYQDNRNRQVVCNCNQGYTGGMVKRSEGSFK
RSRCEQCAPGYYGNPSQPGGRCQPCRCSNNIDMSDLDACDRRTGECKKCLYNTEGPDCGV
CKSGYYGDASRRNCRKCTCSFLGTEHTQCTARDECVCQRATGQCQCLPNTIGLTCDHCKP
NYWNLASGQGCEACGCDPNNAVNSACNEFTGKCQCRDGFGGKTCTDCQEHYWGDPRIQCR
VCDCDPRGIETSQCDQKSGHCVCQQGVSGVRCDQCARGFSGQFPNCQPCHQCFGDWDRVV
QDLAVRTKTLSERAQEIQTTGLTGAYEKAFRDLEKKLAQAQGIVNTRNTTAEAVSSLMEL
IEDLRSQIGETTDTLNRLEGDLTSVQNSNVEASNELSALEREAKQLNLTSDQLHRQLDIL
KNSNFLGAYDSIRSSYNKSRDAERRANQSTTTTPSTVSQSADTRRKTERLISAKKDDFNR
KNAANKRALGDLNAKAQTLDMKKINEKVCGTPGDAPCAESLCGGAGCRDDEGNRHCGGLN
CNGAVAMADNALERSKHAEKELNKAMGEVEELFHKVADAKTKAEEAKSKAQAALDKATNT
KNKVERSNNDLRDLIKQIRDFLMQEGADPDSIETVANRVLELSIPASPQQIRHLAEEIKD
RVRSLSNVDAILQQTQDDVRKAEQLLQEAKKARNRAEGVKSTAETVKQALEDAKKAQAAA
EKAIQRARADIGETEDRLAQIESETSSSEHDLNDAMNRMGNLGREINALKLKRAHNSVAA
ARAEETATMARDKANEAKQILDGELMDKYHTVQELVDTKAKTVQEAKKKAERLRDEAKEL
LKDAQNKLQRLAELERDYEENQKTLEGKAQQLDGLEDKMKAILNNINKQIQIYNTCQ
NT seq
5394 nt
NT seq
+upstream
nt +downstream
nt
atgcacgcgtcactggtaatgttcatatgtgccctggcatatgccaccgcccgggagcca
gaccacgcccacggctgtacccatggcagctgttacccggcaacaggagacctgttggtg
ggccgtgagaagagcctgaaggcatcatctacatgcggctccaggaagaaagacccctac
tgcatcgtcagtcacttacaggatgagaagaaatgtttccagtgtgactctcgccgccca
tatgatcctgtctacaacaccatcagtcaccgcattgagaacgtcatcaccacgttcaaa
ccacaccgcaagaagtcatggtggcagtcagagaatggaaagcctgatgtcttcattcag
ctggaccttgaggcagaattccattttactcatcttatcatgatcttcaagacgtttcgc
ccagcagccatggtgattgagcgatcggcagattttggacgtaactggcaggtgtaccgc
tactttgcctacgactgtgcctcgatcttccccggggtatccaagggacccctgcgcaaa
gttgacgacgtcatctgtgagtcgcgctactctgacatcgagccgtccacagagggagag
gcgatctacagagttctggaccctgccatccacattgaggacccctacagccccaacatt
cagaaccagctgaagatcactaacctgcgcgtgaacttcaccaagctgcacactctggga
gataacctgctggactcccgcgtggagatcaaggagaagtactactacgccatgtacgag
ctggtcgtccgcggcaactgcttctgctatggccacgcctccgagtgtgcccccatcgat
gggatcaaggatgaggagggcatggtccatgggaggtgtgtctgcaagcacaacacgaag
ggtctgaactgtgagctgtgtgatgacttccatagtgacatgccctggagaccggctgag
ggacgcaacaccaacgcctgcaagaaatgcaactgtaacggtcactccagccagtgtcac
tttgacatggcggtgtacctggccacgggcaatgccggcggtggcgtctgtgaccactgt
ctccacaacaccatgggacgcaactgtgagatgtgtaaaccattttactacaaggacctc
agtagggacatcagagaccccggggtctgtactgcctgtgactgtgatcctgatggttcc
ctgaacgggggcatctgtgacgggcatgacgagccgtccctgggcatgatcgctgggcag
tgccgctgtaaggaccacgtggaagggcatcgctgtgacaaatgcaagtctggcttcttt
ggcctgagtgcagcaaacccccgtggctgccaaccctgccagtgtgaccccaggggtact
gtgtcagagagcccaaaatgtgaccctgagagcggggactgcttctgcaagcgactggtc
actggacgcagctgtgaccagtgtctgccagaacactgggcactgagtcacgacctgaat
ggctgcagagactgtgactgtgatgtgggcggagccacagataaccactgctcaatggag
aatgggcagtgccgctgtcgtagtcatatgatgggccgtcaatgtacccaggtggagtct
gggtggtactttatggctctggaccactatacttatgaggctgagctggccatattggga
cagggctgcagtgtggagcagagggagcaccagcctgggcgccctgccacctggactggc
actgggtttgccaaggtcccagagggcagcagcctggagttctccatcaacaacatcccc
tactccatggagtatgacctcctcatccgctatgagccacagatgccacgggactggggg
gaggtccgtgtgacgatcattcggccagggcccattcccaccagcagcccatgtggaaac
accatccctgcagacgacatgctcactgtgtccctgcctgcaggttccaggtttgtcgtg
ctgcctacacctgtatgcatggagagaggagtgagctacactcttcgctttgagttcagt
cgctatctggatgggaacagtattctcattcttggtacaaccgctgccaacattcttgtg
gactctatctccctgatccctcgttactcctccctggagatgttcattggcggtgacccc
gcctccatcgctaggaagcagagcttcgagcgctaccgctgccacgaggtggccaagagc
gtgacacgctcccagatcagcaacgtctgtgccaaactcatcaccagcatgtcagccatc
attaaccatggagccctgccttgccagtgtgacccccagggctcagtcagctcagtgtgt
gacacacacggaggtcagtgtcgctgtaggccaaacgtgattggacttcgctgtgaccag
tgtgctcctgggacgtacggctttggacctgcaggatgtaaagcatgtgagtgcaatctg
gaaggtgcggtcactcggtcgtgtgaccagttgactgggcagtgcccgtgtcgcccgggt
gcgttcggccagcggtgcgatggctgccaggcaggacactggggcttccccaactgtaag
cgatgcctgtgtaatggacatgctgaggagtgccaccagaggaccggagcctgtctcaac
tgcagggacaacactggaggggacaaatgtgacaggtgtgccaacggttactacggcaac
ccagtgttgggcacaggtatgggtaaccaatgtcggccctgcccttgcccagatggccca
aacagcggacgccacttcgctgcctcctgttaccaggacaaccgcaacagacaggtggtc
tgcaactgtaaccaaggatacacaggggggatggttaagcgctccgagggttctttcaag
cgttcccggtgtgagcagtgcgcccctggttactacggtaacccctcccagccaggtggg
cggtgccagccgtgcaggtgcagtaataacattgacatgtcagacctggatgcgtgtgac
cggcggacaggagagtgtaagaagtgtctctacaacacagagggaccggactgtggcgtg
tgcaagagcggttactatggagacgcctcgcgacgcaactgcagaaagtgcacctgcagc
ttcctgggcacagagcatacccagtgtacagcgcgggatgagtgtgtctgccagcgtgcc
acggggcagtgccagtgtttacccaacaccatcggcctgacatgtgaccactgtaagccc
aactactggaacctggctagtgggcagggctgtgaggcctgcggctgtgaccccaacaac
gctgtcaactcggcctgcaacgagttcactggaaagtgtcagtgtcgtgatggattcggt
ggaaagacctgcacagactgccaagagcactactggggagaccccaggatccagtgcaga
gtctgtgactgtgacccccggggcatagagacatcccagtgtgaccagaagtcaggccac
tgtgtgtgtcagcagggggtgtcgggcgtacgttgtgaccagtgtgcccggggcttctca
ggacagttccctaactgccagccctgccatcagtgctttggggactgggaccgggtggtg
caggacctggctgtccgaaccaagaccctgtcggagcgggctcaagagatccagaccacg
ggcctgactggagcctatgagaaggccttcagagacctcgagaagaagttggcacaggcc
cagggcatcgtcaacacccgcaacaccaccgcagaggcagtcagcagcctgatggagctc
attgaagacctcaggtctcagataggtgagaccacagacacactgaatcgtctagaggga
gacctgaccagtgtgcagaacagcaatgttgaggccagtaatgagctcagtgctctggag
agagaggccaaacagctaaacctgacctcagatcagctccaccgtcaactagacatcctc
aagaactccaacttcctgggtgcatatgacagcatccgcagctcctataacaagtcccgt
gacgcagagcggcgagccaaccagtcaaccaccaccacgcccagcactgttagccaatca
gcagacacacgccgcaaaacagaacgcctcatctctgccaagaaagatgacttcaaccgt
aagaacgctgccaacaagcgagccctgggggacctcaatgccaaggctcaaaccctggac
atgaagaagatcaacgagaaggtctgtgggacccctggcgatgccccctgtgcagagagc
ctttgcggaggagcaggttgccgtgacgatgaggggaacaggcactgcggaggcctgaac
tgcaacggtgccgtagcgatggcagataacgctctggagaggtccaagcacgcagagaaa
gagctgaacaaagccatgggggaggtagaggagctcttccacaaggttgcagatgccaag
accaaggcggaggaggcgaagagtaaagcccaggcagctctggacaaggccaccaacacc
aagaacaaggtggagcgctccaacaatgacctgcgggacctcatcaagcagatccgggac
ttcctcatgcaggagggtgctgatccagacagcattgagacagttgccaaccgtgtcctg
gagctgtccatcccagcctcaccacagcagatcagacacctggcagaggagatcaaggac
cgggtccgaagcctctccaacgtagacgccattctgcaacagacacaggacgatgtgcgc
aaagcagagcagctgctgcaggaggccaagaaggccaggaatcgggcagagggggtgaaa
tccacagcagagacggtaaaacaggcacttgaggatgctaagaaggcccaggccgcagca
gaaaaggccatacagcgggctcgggctgacattggtgaaacggaggatcgactagcacag
atcgagtctgagacctccagcagtgaacatgacctaaatgatgccatgaaccgcatgggc
aacctaggtcgggagattaatgctctgaagctcaaacgtgcccacaacagcgtggcagca
gctcgagctgaggagacagccactatggcacgggacaaagccaatgaggccaagcagatt
ttagatggcgagctgatggataagtatcacacagtgcaggagttagtggacacgaaagcc
aagaccgtccaggaggcgaagaagaaagcagagcgcctaagagatgaggccaaagagcta
ctgaaggacgcccagaacaagctccagagactagcggagctagagagagactatgaagag
aaccagaaaacgttagagggcaaagcccagcagttggacggcctagaagacaagatgaag
gctatcctcaacaacatcaacaaacagatccagatctacaacacctgtcagtaa
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integrated database retrieval system
