KEGG   Salmo trutta (river trout): 115166091
Entry
115166091         CDS       T08542                                 
Symbol
plod1
Name
(RefSeq) procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 isoform X1
  KO
K00473  procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 [EC:1.14.11.4]
Organism
stru  Salmo trutta (river trout)
Pathway
stru00310  Lysine degradation
stru01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:stru00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00310 Lysine degradation
    115166091 (plod1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:stru04147]
    115166091 (plod1)
Enzymes [BR:stru01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.4  procollagen-lysine 5-dioxygenase
     115166091 (plod1)
Exosome [BR:stru04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   115166091 (plod1)
SSDB
Motif
Pfam: 2OG-FeII_Oxy Anp1 2OG-FeII_Oxy_3 Glycos_transf_2
Other DBs
NCBI-GeneID: 115166091
NCBI-ProteinID: XP_029575622
Ensembl: ENSSTUG00000009059
LinkDB
Position
28:34801228..34817333
AA seq 733 aa
MRAFSLLILAWMSLLVVLPVIRCKDQRELSEGNLLVVTVATKETDGFRRFMRSARHFNYT
IKVLGRGEPWKGGDYMTTPGGGQKVRLLKAGLQEIKEEDKVVLFIDSYDVVFASGPKELL
KKFQQTRHKVVFSAETLIWPDRHLEDKHPHFREGKRFLGSGGFIGYVRNLKEMVADWTGE
DNDSDQLFFTKIYINPEKRKSINITLDNRCRMFQNLHGSLDEVVLKFEDGQVRARNVLYD
TLPVVVHGNGPTKLQINYLSNYIPTVWTFETGCSVCLEDLRPLLGLKESEYPLVVIGIFI
QQPTPFVSVFFESLLKLEYPKNRLKLFIYNQEQHHEVEVSSFLKDHGKEYQDVKVIGPEE
NMDRVASRNLGLDMCRQDKDCEYFFSMDIEVVLKNKDTLKILIEQNEPIIAPMITREGRL
WTNFWGALSADGYYARSEDYVDIVQGRRVGVWNVPYLAKVYLVKASLLHEELSDNDLFSS
GTLDLDMAFCHNARNKGVFMYVTNMHTFGRMLSTENYQMSHLHNDLWQIFENPKDWEERY
IHENYTKIMRDKLIETPCPDVYWFPLFSDIGCDHIVQEMENFGQWSGGRNTDTRIQGGYE
NVPTIDIHMTQINYEKEWQKLLLDYIAPITETMYPGYYTKCISYLNFVVRYKPDEQPLLT
PHHDASTFTINVALNSKEIDYQGGGCRFIRYNCSVEAPRKGWALMHPGRLTHYHEGLRTT
AGTRYIAVSFVDP
NT seq 2202 nt   +upstreamnt  +downstreamnt
atgagagctttttccttattaatattggcctggatgtccttgcttgtggttttaccagtg
atacgttgtaaagatcagcgagaactatccgaaggcaaccttttagttgtgactgttgcg
accaaagagacagatggcttcaggcgtttcatgaggtctgcccggcactttaactacacc
atcaaggtgcttggcagaggggagccatggaaaggtggggactatatgaccacgccagga
gggggtcagaaagtgcgccttcttaaagctggtttgcaggagataaaggaggaagacaag
gttgtcctcttcattgacagctatgatgttgtcttcgcctccggtcccaaagagctgctg
aagaagttccagcagacaaggcacaaggtggtcttctccgcagagaccctcatctggccc
gacagacatttggaggacaagcacccccacttccgagagggaaagaggttcttgggctcg
gggggattcattggctatgttcgtaacctcaaagagatggttgctgactggacaggggag
gacaatgacagtgatcaacttttcttcaccaagatttatatcaacccagagaaaagaaaa
tccatcaatataacactggacaacagatgcagaatgtttcagaatcttcatggatccctt
gatgaggtggtgttgaagtttgaggacgggcaagtgcgggccagaaacgtgttgtatgat
acattacccgtcgttgttcatggcaacgggcccaccaagctccagatcaactacttgagc
aactacatccccacagtgtggacgtttgagacgggttgcagtgtgtgtcttgaggacctg
cggccactcttaggactcaaggagagcgaatacccactggtggtcattgggatcttcatc
cagcagcccaccccctttgtcagtgtgttctttgagagcttgctcaaactggaataccca
aaaaaccgactcaaactcttcatctacaaccaggagcagcaccacgaggtagaggtcagc
tctttcctgaaggaccatgggaaagagtaccaggatgtaaaggtcatcgggcccgaggag
aacatggacagggtggcttcccgcaacctcggccttgatatgtgccgacaggacaaggac
tgtgagtatttcttcagcatggatatcgaagtggttctgaagaacaaggacaccctaaag
attctcatcgagcaaaatgagcctataattgcacccatgataacccgagaaggccgccta
tggaccaacttctggggagcactcagtgctgatggttactatgctaggtcggaggactat
gtggacattgtgcaaggacgcagagttggtgtgtggaatgtcccctacctggccaaggtg
tacctggtgaaggccagcctccttcacgaggagctctccgacaacgacctcttcagctcg
ggcaccctggacctcgacatggccttctgtcacaacgccagaaacaaaggagtcttcatg
tatgttacgaatatgcacacctttggacggatgctgtcgacagaaaactaccagatgagc
catctccacaacgatctgtggcagatctttgaaaaccctaaggattgggaggagcgttac
atccatgagaactacacaaagataatgagagacaaactgattgaaactccttgccctgat
gtatactggttcccgctattctctgatatcggatgtgaccacattgttcaagaaatggaa
aactttggacagtggtcaggtggccgaaatacggacacaaggatccagggcggctatgag
aatgtccccaccattgatatccacatgactcaaatcaattatgagaaagagtggcagaag
cttctgttggattacatcgccccaatcacagagacaatgtatcctggatactacaccaag
tgtatctcttacctcaacttcgtagtgaggtacaaacctgacgagcagcccctgctcacc
cctcaccacgatgcatctactttcactattaatgtagctctcaacagcaaagaaattgac
tatcagggtgggggatgcaggttcatacggtataactgctccgtcgaggcaccccgcaaa
ggctgggccctcatgcaccctggacggctcacccactatcacgagggcctgcgaaccact
gcaggcactcgatacatcgcagtgtcatttgtggacccctga

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