Salmo trutta (river trout): 115166110
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Entry
115166110 CDS
T08542
Name
(RefSeq) nuclease-sensitive element-binding protein 1-like isoform X1
KO
K09276
Y-box-binding protein 1
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115166110
03019 Messenger RNA biogenesis [BR:
stru03019
]
115166110
03041 Spliceosome [BR:
stru03041
]
115166110
Transcription factors [BR:
stru03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Cold-shock domain factors, YB-1/DbpB-like
115166110
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
115166110
mRNA cycle factors
Common to processing body (P body) and stress granule
115166110
Spliceosome [BR:
stru03041
]
Common components
Common spliceosomal components
General mRNP proteins
115166110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSD
OB_RNB
S1CSD-TOTE-2
Motif
Other DBs
NCBI-GeneID:
115166110
NCBI-ProteinID:
XP_029575664
Ensembl:
ENSSTUG00000016214
LinkDB
All DBs
Position
28:complement(35647483..35654386)
Genome browser
AA seq
379 aa
AA seq
DB search
MAGDSPLHRFSFLPVRSATGERKVESPKAAAPTTAGPGYHLAPGNTLESHRRHYQPETMS
SEAETQQPPEPAVDPESPPSPPATASAGDKKVIATKVLGTVKWFNVRNGYGFINRNDTKE
DVFVHQTAIKKNNPKKYLRSVGDGETVEFDVVEGEKGAEAANVTGPAGVPVQGSKYAADR
NRYRRYPRRRGPARDGEYPDNYQSDGEGEGERPPRKSRECAESAPEGEMQPQQRRPPFPG
RRRYPPYFVRRRYGRRPPYTNAPRGEMTEGGEGDENQGGPDQGNKPMRQNYYRGFRPSRG
GGPPRPRPVRDGDGENKENQDGDGENQEPRQRRYRRNFNYRRRRPQTGGKPQDGKEAKTD
GEPSTEKTPAPAAEQGGAE
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atggctggggatagtccactgcatcgtttttcgttcctcccagttcgatcggcaacggga
gagaggaaagttgagagcccgaaggcagcagcccccaccaccgccggcccaggttaccat
ctagcaccgggaaatacactagagagccaccgccggcattaccaaccagaaaccatgagc
agcgaggccgagacacaacaaccgccggagcctgctgtggatccggagagcccacccagc
ccgccagctacagcttccgcgggggataagaaggtcatcgcaactaaggttttgggtaca
gtcaaatggttcaacgtcagaaatggctacgggttcatcaacaggaatgacacaaaggaa
gacgtctttgtccaccagactgccataaagaaaaacaacccaaagaaataccttcgcagt
gttggagatggcgaaactgtggagtttgatgtggttgagggggagaagggagcagaggca
gccaatgtgaccggcccagcgggtgtcccagtccaggggagcaagtatgcagctgaccgg
aaccgctacaggcggtatccccgcaggaggggccctgcccgtgacggcgaatacccggac
aactaccagagtgacggcgagggtgaaggagagcgccccccccgcaagagccgcgagtgt
gctgagagtgccccagaaggagagatgcagccccagcagcgcaggccccccttccccggg
agacggcgctaccccccatactttgtacgtagacgctacggccgtcggcccccgtacacc
aacgcacctcgcggagagatgactgagggtggcgaaggtgatgagaaccagggaggtcca
gaccagggcaacaaaccaatgagacagaactactacagaggcttccgaccaagcaggggt
ggcggtccaccccgtcccagaccggtgcgggacggcgatggggaaaacaaggagaaccag
gatggtgatggtgagaaccaggagccccgccagcgccgctaccgccgaaacttcaactat
cgccgcagacgcccacagactggcggcaagccccaggatggcaaagaggccaagaccgac
ggcgaaccatctacagagaaaacgcccgctcccgcggccgagcagggcggggctgagtag
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