Salmo trutta (river trout): 115166160
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Entry
115166160 CDS
T08542
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
stru
Salmo trutta (river trout)
Pathway
stru03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
115166160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stru03021
]
115166160
03036 Chromosome and associated proteins [BR:
stru03036
]
115166160
Transcription machinery [BR:
stru03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
115166160
Coactivators
SAGA/TFTC/STAGA complex
115166160
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
115166160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
115166160
NCBI-ProteinID:
XP_029575763
Ensembl:
ENSSTUG00000023734
LinkDB
All DBs
Position
28:37422397..37433000
Genome browser
AA seq
958 aa
AA seq
DB search
MRLTIECSRVKMAAGSDLLDDVFFNTEVDEKVVSDLVGSLESELTGSGRGNSAVRVQAAA
NHIGNPAVCGNSNVQDSKMGLSQELAKPGNSVQRGVINSTRSTMDTAAGTTAAGSSMTAG
HSQSKTGTAGGVVTVVPDHGEGIGKTESAGVQTLNGSSVVINSHNLVSSASSTVPAVTIV
YNGPGSVVKGNVILPSTSSTVIQTSLMDNAVTSTVISSQPSVLNSVPTVTLVRPPMQTPG
AVTSLSGSNTFLTSSVNVAHPACSGAQINKSESPKTTIQKTAQVTGTATALGKNPSTIAI
SPGGIRTIAPQVLAPRLPQPQQNAPNIQNIQLPPGMVLVRSESGQLLMIHQQTLAQMQAQ
SQSPMTPRPATPTSTPPVQITSVQAPGMPLMARQVTPTTIIKQGTPAQTTVLQRPPVLQQ
NTIVLGGAAATPGQAPVQPGSAAAAVNQRAGTPGATRTPSTPTTETLENVKKCKNFLSTL
IKLASSGKQSSETTASVKDLVKSLLEGKIEAEEFTSRLYRELNSSPQPYLVPFLKRSLPA
LRQMTPDSTAFIQQSQLPQASVQPASSSTALTAVVLGGTAAAQRLPLNRTTTTSPGAKGT
MHQSPVISQAQTPHSKPGLMVPQQQGALASTQVTLAQSPMVTFRGQSHSRIIMGHPQVVK
QLQTVPVVKQALAPGAKVTLGRQSMLSVAQKNKLKEASGGTFKDDDDINDVASMAGVNLS
EESARILATNSELVGAVTRSCKDEAFLYTTSLTRRVQEIGRRFGVIDLGPEVINYVSHAT
QQRLQNLLEKVTEVAQQKNITFKEDDKYEQVSDVRAQLKFYEQLDQMEKQRKEEQEREIL
MKAAKSRSRQEDPEQLRLKQKAKEMQQQELNQIRQKEANMTALAAIGPRKKRKMESPVNG
AGAEGSGSGPSSSAGANSGGSRPQRQRITRVNLRDLLFCLENERETSSSHLLYKGFLK
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctcacgatcgagtgtagtagggtaaagatggcggcgggctcggatttgctggat
gacgttttcttcaacactgaggtggacgagaaagtagttagtgatcttgttggatctttg
gagtctgagctcacgggatcgggtcgcggaaactctgcagtcagggtccaggctgccgca
aatcacattggcaaccccgctgtatgtggcaattccaatgtccaggacagcaaaatggga
ctttcacaagagcttgctaaaccagggaatagcgtccaaaggggtgtcattaatagtacg
aggtccaccatggatacagcggccgggacgacggcggcgggctcaagcatgacagccgga
cacagtcagagtaagacggggacagccggtggcgtggtaacagtggttcccgatcacggg
gaagggatcggaaaaaccgagtcggctggtgtacaaactttaaatggaagtagcgttgta
ataaactctcataatttggtgagctcggcaagcagcacagtgcccgccgtcacgattgtc
tacaacggaccaggctccgtggtcaaaggaaacgtaatcttaccctcaacttccagcact
gtcattcaaacctctctaatggacaatgctgtcacttcaactgtaatatcgtctcagccg
tctgttctaaacagtgtgcccactgtcacgctcgtgaggccgcctatgcaaacccccgga
gcagtcacctcgctgagcgggagcaatacctttctgacatcatctgtcaacgtcgctcac
cctgcatgttcaggagcacaaatcaacaagtcggagtcgccaaaaacgacaatacaaaag
actgcacaggtgacagggacggcaacagctttagggaaaaacccatcgactattgcaatc
agtcctggtgggataaggacgatcgctcctcaggtattggccccaagacttccgcagccc
caacagaacgctccaaacatccaaaacattcagctccccccagggatggtgttggtgcgc
agtgagagtgggcagctgttaatgatccaccagcagaccctggcccagatgcaggctcag
tcccagagccccatgaccccacggccagccacccccaccagcactccccctgtccagatc
acctctgtacaggctccagggatgcccctcatggcccgtcaggtgacccccaccaccatc
atcaagcagggcaccccggcccagaccactgtcctccagaggcctcctgtgctacagcag
aacaccattgtgctgggtggggcggctgccaccccaggtcaggccccagtgcagcctggc
tcggcagcagcagcagtcaaccaacgagctgggacccccggagctaccaggacaccaagc
actcccactacggagaccctggagaacgtgaagaaatgcaagaacttcctttccacgctg
atcaagctggcatccagcgggaagcagtcgtctgagaccacggccagcgtcaaggacctg
gtcaagagcctgttggaaggtaagatcgaagcggaggagttcaccagtcggttataccgg
gagctcaactcctctcctcagccatatcttgtgcctttcctcaagaggagtctccctgca
ctgcgtcagatgaccccagactcgacagccttcatccagcagagccagcttccccaggcc
agcgtccagcctgcctcctcctccacagccctgacggcagtggtgctggggggcacggcc
gccgcacagagactccctcttaacagaaccaccaccaccagccccggggccaaggggacc
atgcaccagtcccctgtcatcagccaggcccagacacctcacagcaagcctggcctgatg
gtgccccagcagcagggggcgttggcaagtactcaggtaactctggcccagtcgcccatg
gttactttccgaggccagtcccacagtcgcatcatcatgggacatccgcaggtggtcaaa
cagctgcaaacagttcctgtagtgaaacaagctctagcaccaggggccaaggtaacactg
gggcgccagtctatgctctctgttgcacagaagaacaagctgaaggaggcaagcggagga
accttcaaagatgatgatgatatcaatgacgtggcctccatggctggagtcaacctatca
gaggagagcgcccgtatcctggcaaccaactctgagctggtgggcgcggtgacccgctcc
tgtaaggacgaggccttcctctacaccacctcactaacccggagagtacaggagatcggt
aggaggtttggggtgattgacctggggccagaggttatcaactacgtttcccatgcaaca
cagcagcggttgcagaacctgctggagaaagtgacggaggtggcgcagcagaaaaacatc
accttcaaggaggatgataagtatgaacaggtgagtgacgtgcgagcccagctgaagttc
tatgaacagctggatcagatggagaaacagaggaaggaggagcaggagagggagatcctg
atgaaggctgctaagtctcgatcgcggcaagaggacccagagcagcttcggctcaaacag
aaggccaaagagatgcagcagcaggagctgaatcagatcaggcagaaggaggccaacatg
acggccctggcagccatcggccccaggaagaaacggaaaatggagtcccccgtcaacgga
gccggggctgagggttctggctctggtccctcatcgtcagctggggccaatagcggaggc
tccagacctcagcgccagcgcatcaccagggtcaacctcagggacctgctcttctgtctg
gagaatgagagagaaaccagtagctcacatctgctctacaaaggcttcctcaaatag
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