Salmo trutta (river trout): 115166165 Help Entry 115166165         CDS       T08542                                  Name (RefSeq) collagen alpha-3(IX) chain-like   KO K08131   collagen type IX alpha Organism stru  Salmo trutta (river trout) Pathway stru04510   Focal adhesion stru04512   ECM-receptor interaction stru04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:stru00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     115166165  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     115166165   09142 Cell motility    04820 Cytoskeleton in muscle cells     115166165  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00535 Proteoglycans [BR:stru00535]     115166165 Proteoglycans [BR:stru00535]  Extracellular matrix (ECM) proteoglycans   Others    115166165 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen Motif Other DBs NCBI-GeneID:  115166165 NCBI-ProteinID:  XP_029575769 LinkDB All DBs Position 28:38316930..38339484 Genome browser AA seq 678 aa AA seqDB search MSIFSALGLLLLCQLLASSTAQRPGPRGAVGPPGPPGPAGKDGTDGKDGPAGLSGKAGPK GKAGAAGGPGNPGLPGLPGVDGLTGADGPAGKDGPPGELGDAGPPGPGGPPGRGRPGAPG PPGANGLAGGIGPQGPAGPEGLAGLAGPPGPDGPPGLPGALPDGSGDLLCPAICPPGPSG PPGMPGFKGHTGHKGDKGELGKDGEKGYAGPSGPPGIPGTVGLQGPRGLRGLQGPMGAVG DRGLPGFRGKPGIAGIIGKTGDVGEKGPEGFRGPKGEIGKIGPKGVPGGAGPKGEPGIPG RDGKDGTQGLDGEKGDAGRNGVPGEKGPNGLPGLQGKAGAKGATGGVGDPGEMGEAGPSG EPGIPGDIGIPGERGEAGPRGVAGGIGPVGNIGVRGGKGFQGIKGALGDPGLPGPTGIRG GFGERGPVGASGPKGDVGVAGADGLPGENGEPGPFGPVGQKGESGKRGELGPKGVVGPQG ELGARGVPGKPGLMGFQGEQGLSGIAGKIGVPGKLASEQHIRELCGSMIDDQIAKLASNL RRPLSPGQVGRPGIAGRPGKPGETGSIGHPGSRGPPGYRGLPGDLGDPGPRGDLGEQGDK GPIGKAIEGRIGDQGDQGIPGVFGIVKDGRDGSPGDPGEPGEAGRTGRTGHSGSPGICDT TACQGANVHGKTSNPKNH NT seq 2037 nt NT seq  +upstreamnt  +downstreamnt atgtctatattctcagctctcgggctgctcttgctgtgccagcttttggcatcatctaca gcccagagacccggcccacgaggagcagtcgggccgccgggacccccgggacccgcaggg aaggatggtactgacggcaaagatggccctgctggactttcagggaaagctggacccaag gggaaagcaggggcagcaggaggaccagggaacccaggcctgcccggcctcccaggggtg gacggattgacaggtgctgatgggcctgcagggaaggacggtcctccaggggagttgggc gatgctggacctcccgggccaggtggacctcctggcagagggagaccgggagctccaggg ccaccaggagccaatgggcttgcgggcggaatcgggccacagggaccagcaggccctgag ggtcttgcaggattggctgggcctcccggccctgacggacccccaggtcttcctggggct ctccctgatggcagtggagatctgttgtgtcctgccatctgccctcctggcccctccggc cctccaggaatgcctggattcaagggtcacacaggacacaaaggagataagggagagctc gggaaagacggcgagaagggttatgctggcccatctggtcctccaggtattcccggcact gtgggcctgcagggtcctcgtggtttgaggggacttcagggcccgatgggggcagtagga gacaggggtttacctggtttccgaggcaaacctggtattgctggcatcattggcaagaca ggtgatgttggagagaaaggaccagagggatttagagggccaaagggcgagattggcaaa attggtccaaagggagttcccgggggagcaggacccaaaggggagcctggcatccctggc agagacgggaaagatggcacccagggactggatggcgagaagggcgacgccggacggaat ggggtacccggtgagaaaggacccaacggccttcctggtttacaaggaaaggctggcgca aagggagccacaggaggagttggcgacccaggagagatgggagaggcagggccgtctgga gagccaggtattcctggcgacatcggtatcccaggagagaggggcgaggcaggacccaga ggagtggctgggggcatcggaccagtgggcaacatcggggttcggggcggcaaaggcttc cagggaataaagggggctctgggggaccctggccttcccggaccaaccggaatccgcggc ggatttggtgagaggggtccagtcggagcatcaggccctaaaggagacgtgggtgtggca ggagctgatggtttgcctggggagaatggagaacctggtccatttggtccagttggccaa aaaggagagtctgggaagcgtggagagctgggacccaagggcgtggtgggaccacaggga gagctcggagccagaggggttcctgggaaaccaggcctcatgggctttcagggtgaacag ggtctgtccggaatcgcgggcaagattggtgttcccggtaaactggcaagcgaacagcac atcagagaattgtgtggatctatgattgatgatcagattgcaaagctggcttccaacctc agaagacccctgtcccctggccaagtgggtcgccccggcattgccggacgtccagggaag ccaggcgagactgggtctatcggtcaccccggctcccgtggacctcctggctacagagga ctgcctggagacctaggagaccccggtcccagaggtgatcttggtgaacagggtgacaag ggacccattggaaaagccatcgaagggcgcattggagaccaaggagatcaaggtattcca ggagtatttggaatcgtcaaagacgggcgtgacggatccccaggagatccaggagaaccc ggagaggcaggtaggacaggaaggaccgggcactcgggctccccaggaatctgcgacact accgcctgccagggggcaaatgtccatgggaaaacctccaatcccaagaaccattaa

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