Salmo trutta (river trout): 115166199
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Entry
115166199 CDS
T08542
Name
(RefSeq) methyl-CpG-binding domain protein 5-like
KO
K26585
methyl-CpG-binding domain protein 6
Organism
stru
Salmo trutta (river trout)
Pathway
stru03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
115166199
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
stru03036
]
115166199
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
115166199
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBD
Motif
Other DBs
NCBI-GeneID:
115166199
NCBI-ProteinID:
XP_029575839
LinkDB
All DBs
Position
28:complement(39344383..39369920)
Genome browser
AA seq
1540 aa
AA seq
DB search
MMGGSESGSGDTDGVQTVAIQVPIGWQRRVEDGLVVYVSPSGTVLSSLEEVKSYLLTDGT
CKCGLECPLVIHKVFNFSLGVKVQQRSQLVGKAEQDMTKLCNHRRKVVAMAALCRSMQAS
QLPYVSCHTEVTSAIMENRDPKRMRVDREEEEERGTYPSKHHLVQSRPNNNLNHNPCGSP
KYSTQLVYSYNGSSPLSHASTNSHHSPEILKRLPPPLHFPPTTSQFSSYGAPQRSPYTPT
PQNFSQGQRTPQTPEAPGSPNLGPLSPLPPSSPGTLGRGGQSHPHGIIIGSLLSPSCSPS
PRQRSRHPSASSSLSEQGVGGVVLGGYPPRRISSSSPHSPLPGGSPNLHFPKYKLEDILE
QFRNSGNASTNNHILNPNSLSNQSNPQILSLALEKGEKPTKAPASATGSGSGMGISAGPS
GSPLGQFLNHQKQPHTASFPASSLLSAAAKAQLASQMAHDHSPNSASVLSSATSLEVSKE
SRQSKVTNSTLHNNSHPSVTRPLPAASHLLLHPCATLSQPLASSPLHLSPTDRTSHRKRQ
RRSPTVLSMLKDSQVSALRTPGDVLNLSDLHSQPSSTSGSSHSATSENHLQGLRLSVRRS
CPLTGPQKQPDGALDFTTIVAGQPDPPTQPLSALLHLLSMQNAQAAGAQPGSGHGTGGTR
QSPRQSPSPSHLNIRPFPMQSPSHPCTMQGLSQPLSPSQSLSRLGSASAQSPHTKASPKQ
TRSPSTALSNAQSAHHRSSPSPTPHTPDGLRQAQNQPMDAATTTTTIQSPMCQALPDVSA
SVEIESISTLGPGLSLGHPPNSTPTSNHSTTVTSCSSTTTSPRPLDLSNHVLALLAASST
TPLEEGGLDTTTGNNTAGVQEPESVDHRSSTVSKPPGGCSPGPCNTPSLGDSSGSLPLAE
AFPFMSQEQLLQLLSATAGLPSLLDPTILGSLPLGLWLGGQQGHLPTSNTSQQHHQLPDH
QQQSEHQQLLLQHEQHQEQHQKQQQTAHLNHNFPFSLLPSLMGGQGELPLNLLGLLNPLL
PPSATLTPGQEGDLGIGEKLGLQALLMASLLLGQQQAAMLPLSGLGQLSLDLPLQQQHIP
ALLDGLSLDKGSGLLDLSSFPGPGLLEALQGLLPPAEGPLQALQSLLLPAPLPPPGFLSL
SPTLLTAALGSTDLPPTPQLPPPQQPPPQVSASGPDGGVDTLIPLSVQGKDNPVLHQLLP
TLLNPSLLGDLSALTSLHSLLGLGAGPLLLPPVQTSALGMPLLQGPDGAINLLNNIQLNM
APPSEGEKPISLQEKDSPAPQEDIPANRLTPEAAPSPCPVRTPVSQRGEGSAGSVLDPYA
SFMDTIYTSFLQVSAKEQEAAQTGVEVLCALPPSYPGEHPAPSAPLSLSPRLACSLRNPE
LSRLNLEAAHSPAQGTPKPSNDGSSTPLQSKPGVPEGLTNPPLPPIYLEEAKTESYGQAV
TDRNGDRPQAGVYLSPRDGGSCPKEETVGLQHMEQGKNQTAQTVGARRGRKRKQTLQNVL
EDFRDLDAPALEEPNPTVVLLKPERSVRGRRRRGARSQRQ
NT seq
4623 nt
NT seq
+upstream
nt +downstream
nt
atgatgggaggcagtgagagtggcagtggagacacggatggagtccaaactgtggcaata
caagtccccattggctggcagaggagagtggaggacgggcttgtggtgtatgtcagtcca
agtggcacggtcctgtcttcactggaggaggttaagtcttatctgttgaccgatggcaca
tgcaagtgtggcctggaatgtccgctggtcatccacaaggtgtttaactttagcctaggg
gtcaaagttcagcagcgcagccagctggtggggaaggcagagcaggacatgacaaagctc
tgtaaccatcgaaggaaagtggttgccatggcagcgctctgtcgcagtatgcaggcttca
cagctgccctatgtttcctgtcacacagaggtcaccagtgccattatggagaaccgagat
ccaaagaggatgagagtggacagggaagaagaagaagaacgtggcacttatccctctaaa
caccatctagtccagtccaggcccaacaataatctcaaccacaacccttgtggcagtcct
aaatattccacccaacttgtgtattcttacaatggttcctcacccctctcacacgctagc
actaactctcaccactctcctgagattctgaagagactgccccctcctctccatttccct
cccaccacctctcaattctccagctatggggcacctcagaggtccccatacacccccacg
cctcagaacttcagtcagggtcagaggacaccccagactccggaagcccccggatctcct
aatttggggcccctctctccccttcctccctcctcccctgggacactgggaaggggaggg
cagagccacccacatggtatcatcattgggtctctcctgtccccctcatgttccccctct
ccccgccagcgctcacgtcacccctccgcctcttcctcgctttctgaacagggggtggga
ggggtggtgctgggcggctacccccccagaaggatatcctcttcttccccgcactctcct
ctacccggggggtcccctaacctccatttccccaaatacaagctcgaggacatcttagag
cagttcaggaactcaggcaacgctagcactaataatcacatccttaacccgaactcactg
agcaaccaaagcaatcctcagatcctctctctagctcttgaaaagggtgagaagcccaca
aaggcacctgcttctgccaccggctcaggctcaggcatggggatcagtgctggtccttct
gggtcgcctcttggacagttcttgaaccaccagaagcaaccacacacagcctcgtttcct
gccagtagcctcctctcggcagcagctaaggctcagctggccagccagatggcccacgac
cacagtcccaattcggccagcgtccttagctcggccacctctctggaggtctcgaaagag
tctcggcagtcaaaggtaacaaacagcactttacacaacaacagccatccctccgtcact
aggcccctccctgcagcctcccacctgcttctccacccctgcgccaccctctctcagccc
ctagcctcgagtcccctgcacctctcccctacagaccggacgtcccataggaagcggcag
cgccgttcgcccacggtgctcagcatgctgaaggactcccaggtgagcgctctcagaact
cccggcgacgtgctcaacctctccgacttgcactctcaaccctcctctacctcaggctcg
tcccactctgccacctcggagaaccacctccagggtctgaggctctcagtccggcgctcc
tgcccgctcacagggccccagaagcagcctgacggcgccctggacttcactacgatcgtg
gcgggtcaaccggatcctcccacccagcctctctccgctctgcttcacctgctcagtatg
cagaacgcccaagccgccggagcccagcccggctctggacacggtacaggaggcacgagg
cagagccccaggcagtctccctctccctcccatttaaacattagaccattccccatgcag
tccccctctcatccctgtaccatgcaaggcctgtcacagcccctgtctccctctcagtca
ttgtccaggcttggtagcgctagtgcacagtctccacatacgaaggccagtcccaaacag
acacggtctccctctacggccctgtccaacgctcagtcagcacaccatcgcagtagcccc
tcgcccaccccacacacccctgatgggctacggcaggcccaaaaccaacctatggatgcc
gccaccaccaccaccaccatacagtctcccatgtgccaggccttgcccgacgtcagtgca
tcagtggagattgagagcatatcaacactaggccctggtctcagcctgggtcatcctccc
aacagcacccccacctccaaccatagcaccaccgtcaccagctgcagcagcaccaccacc
tcccccagacccctggatcttagtaaccacgtgctggccctgctggcagcctcctccacc
acgcctctggaggaagggggcctggacacaaccaccggcaacaacactgcaggggtgcaa
gagcctgagagtgttgatcatcgtagttctacagtgagcaaacccccaggaggttgcagc
cccgggccctgcaacaccccttccctaggggactcctccggctccttacccttggccgaa
gccttccccttcatgagccaggagcagctgctccagcttctgtctgccacagccggcctg
ccctccctcctggaccccaccatcctgggctccctgcccctgggcctgtggctgggcggt
cagcagggtcacctccccacctctaacacctcacagcaacaccatcaattgcccgatcat
caacaacaatcggaacatcagcaactactgttacagcatgaacagcatcaagagcaacac
cagaaacaacaacagactgcccatctgaaccacaactttccgtttagcttactcccctct
ctaatgggaggtcagggagagctgcctctcaatctcctgggtctgttgaacccacttcta
cccccctctgccacccttaccccaggccaggagggtgatctgggtataggggagaaactg
ggcctccaggctctccttatggcctccctgctacttggccaacagcaggctgccatgttg
cccctgtctgggctgggccagttgagcctggacctccccctgcagcagcagcacatccca
gccttgttggacggtttgtctctggataaaggctctggactcctggacctgtcgtccttc
cccggccctgggctccttgaggccctccagggcctgctgccgccagccgaggggcccctc
caggccctgcagtcgctcctgctccccgctcctctccctcccccgggcttcctctccctc
agccccactctgctaaccgctgccctgggttctactgacctccctcccacccctcagctc
cccccaccccaacaacccccacctcaggtctcagcttcaggccctgatgggggggtggac
accctcatccccctgtctgtccaggggaaggacaaccctgtcctccaccagttactgccc
actctcctcaacccaagcctactaggagacctgtctgctctgactagcctccacagcctg
ctggggctaggtgcaggccctctcctcctcccccctgtacagacctctgccctgggcatg
cctctactccagggccctgatggggccatcaacctcctcaacaacattcagctcaacatg
gcaccgccctcggagggagaaaagccaatctccttacaggaaaaagacagccccgcccct
caggaggatattccagccaatcggcttaccccagaggctgcgcccagcccctgtcccgtc
cgtacccccgtgtcccagcgtggtgagggctccgcggggagcgttctggacccctatgcc
tccttcatggacaccatctacacctctttcctccaggtcagtgctaaagagcaagaagca
gctcagactggggtggaagtcctctgtgccttacccccctcctaccctggggagcaccct
gccccctctgcccccctgtccctgagccctcgcctggcctgctccctgaggaacccggaa
ctgtcccggctcaacttggaggcggcccactccccggctcagggcacccccaaacccagc
aacgacggctcgtccacacccctgcagagcaagccaggggtcccagagggtctcactaac
ccccctctgcctcccatctaccttgaggaagccaagaccgagtcgtacggccaggctgtc
acagataggaatggggacagaccccaggcaggggtgtacctgagccccagagatgggggc
agctgccccaaggaggagactgtgggtctgcagcacatggagcagggcaagaaccaaact
gcacaaacggtaggagccaggaggggcaggaagagaaaacaaacgctacagaatgtgctg
gaggatttccgagatctggacgctccagccctagaggaacctaatcccacggtggtgctg
ctgaagcctgagaggtcggtccggggcaggaggcggcgtggggccaggtcccagagacag
tga
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