Salmo trutta (river trout): 115166212
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Entry
115166212 CDS
T08542
Name
(RefSeq) serine/arginine-rich splicing factor 6-like
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
stru
Salmo trutta (river trout)
Pathway
stru03040
Spliceosome
stru05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115166212
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115166212
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
stru03041
]
115166212
Spliceosome [BR:
stru03041
]
Common components
Common spliceosomal components
SR proteins
115166212
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
DbpA
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
115166212
NCBI-ProteinID:
XP_029575866
Ensembl:
ENSSTUG00000010609
LinkDB
All DBs
Position
28:39612237..39616085
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AA seq
335 aa
AA seq
DB search
MPRVYVGKLSYHAREKDLQRFFNGYGKLMEIDLKNGYGFVEFEDNRDADDAVYELNGKEL
CGERVTVEHARGPRRDRDGYSGGGGGRSSSGYSSSRSRTGRDKYGPPVRTEYRLIVENLS
SRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFGSRSDMRRALDKLDGTDINGRKIRL
VEEKSRRRRSYSGSRSRSRSRRRSRSRSSRSRTNSRSRSHSRSKRRRSRSGRKSRSRKSR
SRSRTRKSRSRSDKSKSRSKSHSKVKSERDSSSPSKEKLASKKSRSRSATPMGNGKEEPS
SRSPSPAADRRSKSPDKRSVSRSPSRSRSRSASRD
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgccccgtgtctatgttggaaaactaagttatcatgctcgagagaaagaccttcagcgg
tttttcaatggctacggaaagctcatggaaattgatctgaaaaatggatatggctttgta
gagtttgaggacaatcgcgatgcggatgacgctgtgtatgaactgaatggcaaggagttg
tgcggggagcgtgtgaccgtggaacatgcaagaggcccgcggcgcgaccgagatggatac
agtggtggcgggggtggtcgaagtagtagtggttacagcagcagcagaagccgcactggc
agggataagtatgggccacctgtccgtaccgagtaccggctgattgttgagaatctgtcc
agccgctgtagctggcaggatctgaaggatttcatgcgccaggctggagaggtcacgtac
gctgacgcccacaaggagcgtaccaacgagggtgtcatcgagtttggctcgcgttcggac
atgaggagggccctggacaagctggacggcacggacatcaacgggaggaagatccgcctg
gtggaggaaaagtctcgccgccgccgctcctactctggcagccgctccaggtctcgcagc
agacgtcgctctcgtagcaggagcagccgctccaggactaactccaggtcccgatcccat
tctcgcagcaagagacgtcgctctagatctggaaggaagtcccgttcccgcaagtctcgt
tcccgttctcgcacccgcaaatccagatcccgctccgacaaaagcaagtcccgttccaag
agccattccaaggtgaaatctgagcgggattccagcagcccctccaaggagaagttggct
agcaagaagtcccgtagccgctcggcgacccccatggggaatgggaaggaggagccgtcc
tctcgctccccatccccagcagctgaccgtcgctccaagtctccggacaagcgatctgtc
tcccgctccccatctcgctccaggtctagatcagcttcccgagattaa
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