Salmo trutta (river trout): 115166321
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Entry
115166321 CDS
T08542
Name
(RefSeq) RNA-binding protein 39-like isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
stru03041
]
115166321
Spliceosome [BR:
stru03041
]
Common components
Common spliceosomal components
General mRNP proteins
115166321
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_7
RRM_5
RRM_8
Motif
Other DBs
NCBI-GeneID:
115166321
NCBI-ProteinID:
XP_029576086
Ensembl:
ENSSTUG00000029482
UniProt:
A0A674B7H4
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Position
28:complement(44454476..44476498)
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AA seq
525 aa
AA seq
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MADDFDVEAMLEAPYRKDEIKSSSANGQEERSSKKKKKRSHSRTSRSPSSDKRRSKSKDG
KKSRDRKRSKSPEKKRSRSKERRRSGSRSREHAERYRGHRSPFWKRSRSRSPFKKDKSPV
RKPIDNLTPEERDARTVFCMQLAARIKPRDLEDFFSAVGKVRDVRMISDRNSRRSKGIAY
IEFLEVNSVPLAIGLTGQRLLGVPIIVQAPQAEKNRAAAMANNLQKGNAGPMRLYVGSLH
FNITEDMLRGVFEPFGRIESIQLMNDSETGRSKGYGFISFADAECAKKALEQLNGFELAG
RPMKVGHVTERTDPSTASSFLDNDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQA
LQMSGSIHSTPIHFVNMAAGTDIQASLNPPPEAPATPSLNLAPSRNQAMNLSTQPLATHC
LQLSNMFNPQLENEPGWDVEIQDDIIEECNKHGGIVHIYLDKNSPQGNVYIKCPTIPTAM
AAVNALHGRWFAGKMITAMYVPFPTYHNLFPDSLTAAQLLMPVRQ
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgactttgatgttgaggctatgctagaggctccatacagaaaggatgagata
aagtcctctagtgctaatggacaggaagagcgcagtagtaagaagaaaaaaaagaggagc
cacagtaggactagtcggagcccgagctctgacaaacgcagaagcaagagcaaagatggg
aagaagagccgggatcggaaaaggagcaagagtccagagaagaaacggagccgcagtaaa
gagcgccggcgcagtggctcccgtagcagggaacatgctgaacgctacagaggacaccgg
agccccttttggaaacgctcaagaagtcgtagccccttcaagaaagacaagagtccagta
aggaaaccaattgacaacctgaccccagaggagagggatgcccgcactgttttttgtatg
cagctggcagccagaatcaaaccacgagacctagaggacttcttctcagctgtggggaaa
gtgagagatgtgagaatgatctctgacagaaactccaggaggtcaaagggcattgcctac
attgagtttctggaagtgaattcagtcccgctggctattggcttgactggtcagagactt
ctaggagtgcccatcatcgtacaggcccctcaggctgagaagaacagagctgcagcaatg
gccaacaaccttcagaagggtaatgctggccctatgcggctgtatgtgggctctctgcac
ttcaacatcacagaggacatgctgcgaggtgtcttcgagcctttcggaaggattgagagc
atacaactgatgaatgacagtgaaactggacgatccaaaggatatggtttcatctcattt
gcagatgcagagtgcgctaagaaggccctggagcagctgaatggatttgagctggccgga
cggcccatgaaggttggtcacgtgacggaacgcaccgacccctccaccgccagctccttc
ctggacaacgacgagctggagaggacaggcatcgacctgggcaccaccgggcgcctgcag
ctcatggcccggctggcagagggtactggtcttcagatccccccggctgcacagcaggct
ctacagatgagtggttccatccactcgactccaatccactttgtcaacatggcagctggt
acagacatacaagccagcctgaacccaccccctgaagctcctgccaccccttcactgaac
ctggctccaagcaggaaccaggccatgaacctctcaacgcagccactggctactcactgc
ctacagctgtccaacatgttcaacccacagttggaaaatgaacccggctgggatgtcgag
attcaagatgacatcattgaggagtgcaacaaacacggtggaattgtccacatatacctc
gacaagaactcccctcagggaaacgtgtacataaaatgccccacaatcccaacagcaatg
gctgcagtgaatgcgctacatgggcggtggtttgcaggtaaaatgatcactgcaatgtac
gtacctttcccgacctaccataaccttttccctgattcgttaacggcagcccagttattg
atgcctgtgcggcaatga
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