Salmo trutta (river trout): 115166413
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Entry
115166413 CDS
T08542
Name
(RefSeq) LOW QUALITY PROTEIN: homeobox protein Hox-C1a-like
KO
K09301
homeobox protein HoxA/B/D1
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115166413
Transcription factors [BR:
stru03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
115166413
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
DUF7255
Motif
Other DBs
NCBI-GeneID:
115166413
NCBI-ProteinID:
XP_029576174
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All DBs
Position
28:13816458..13820272
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AA seq
340 aa
AA seq
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MNLYQELTCDGESSALFAGGYRPREIRIGDLDQIISPELGAGNEGNSLSEGDTGYSLQHS
YPSFSGANSATDCTVTQLPVYSGSSSSPLTQSQGSSSTPPACLHYSRLPSYLRVQEHDFP
GLGYSSSTHITGTEALAHAEFGSINAHIKIYTHDGSNVHFAVVDSSSPSDPKCKVAELSH
RSKTFDWMNVKKRSQARTAKLHMACGLSLVAPGVSMDRGGGGNHSIPTDGHHITANGVLR
TSFTTKQLTELEKEFHFNKYLTRTRRVEIASALQLSETQVKIWFQNRRMKQKKLMREGLL
PVACRVLELLRKLTLQQPGHLFLSWTTCTDLVLSQTPAAP
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgaatttgtatcaagagttaacgtgcgatggggagagtagcgctctgttcgcaggggga
taccgaccaagggagatcaggataggtgacttggaccagatcatttctccagaacttgga
gctggcaatgagggtaactctttatcagagggtgacacgggatattcattacaacacagt
tacccgtctttctccggtgccaattctgcaaccgactgcacggtaactcagctcccagtc
tactcaggctcgagcagctctcctctgacacagagtcagggctcttcaagcacgccaccg
gcctgccttcactactctcgtctcccctcctacctccgggtgcaggaacacgacttcccg
ggacttgggtactcctcttccacacacatcaccgggactgaggcgctggcgcacgctgaa
ttcgggtctataaatgcgcacattaaaatctacactcatgatgggtctaatgttcacttt
gctgttgtggacagcagctctccctccgaccccaagtgtaaggtagctgaactcagtcac
aggagcaaaacttttgattggatgaacgtgaagaagagaagtcaagctcggacggccaag
ctgcacatggcctgtggattaagtttagtcgctccgggcgtcagtatggacagaggaggt
ggaggtaaccacagcattcccaccgatgggcatcatattaccgctaacggggtactaagg
accagtttcaccaccaaacagctcacagagctcgagaaggagttccacttcaacaagtac
ctgacgcgcaccagacgcgtggagatcgcgagcgccctgcaactgagcgagacgcaggtg
aagatttggttccagaaccggcgcatgaaacagaagaaattaatgcgcgagggccttctc
ccggtggcctgccgtgtcctcgagctgctcagaaagctcacgctccaacagcctggacac
ttattcctctcctggacaacttgtaccgacctcgtgctctcccaaacacctgccgcccct
taa
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