Salmo trutta (river trout): 115166816
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Entry
115166816 CDS
T08542
Name
(RefSeq) Bardet-Biedl syndrome 4 protein-like isoform X1
KO
K16531
Bardet-Biedl syndrome 4 protein
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
stru03036
]
115166816
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
stru03037
]
115166816
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
115166816
Cilium and associated proteins [BR:
stru03037
]
Primary cilia and associated proteins
BBSome
115166816
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_8
TPR_11
TPR_19
TPR_14
TPR_17
ANAPC3
TPR_12
TPR_16
TPR_CcmH_CycH
TPR_9
TPR_7
TPR_15
TPR_Slam
ARM_TT21_2nd
NatA_aux_su
ARM_TT21_N
ARM_TT21_4th
TPR_10
PknG_TPR
Wzy_C_2
TPR_20
ARM_TT21_C
HrpB1_HrpK
TPR_MalT
Clathrin
Motif
Other DBs
NCBI-GeneID:
115166816
NCBI-ProteinID:
XP_029576519
Ensembl:
ENSSTUG00000037011
LinkDB
All DBs
Position
29:6285535..6305330
Genome browser
AA seq
544 aa
AA seq
DB search
MADEENTLTLPVASETKKRQAPKAPELPILERRNWLIHLHYIRKDYETCKAMIKEQLQET
QGMCEYAIYVQALILRLEGQIQPSLELFQSCAILNPTSPDNLKQVARSLFLLGKHKAAIE
VYHEAGKLNEKDWEINHNLGVCYSFIKDFQNSEEQLNAALQLKKHDRTFMTLGKVHLLAG
DTNKAIEVYKSAVEFSPENAELLTTLGLLYLQLGKYQKAFEHLGNALTYDPNNYKAILAA
GSMMQTHGDFDVAMNKYRVAACMVPESPPLWNNIGMCFFGKKKYVAAISCLKRAHYLSPF
DWKVLYNLGLVHLTMQQYASAFHFLSAATNLQPRLGELYMLLAVALTNLEDVDNARRSYE
QAVALDQSNPLVNLNFAILLYNHGDKKGALQQYQEMERKVNILKDSNTEFDPELMDMAQK
MAAALQVGESLEWTKPVKDPKSKQRSAGAPSKTPGSSQQPLGTNQALEQAMSSAAGYNKS
ITLPTGVSPHSQPTPPSLALEEEPDVETTPTRAPQPEESDPSTTLPPLAAKPKVKKSKLK
QERN
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaagaaaacacactaactctcccagtggcctctgagacgaagaaacgccag
gctccaaaagctccggaacttcccattctggagaggaggaactggctcatccacctgcac
tacatccgcaaagactatgagacctgcaaggcaatgatcaaagagcagctacaggagacc
cagggaatgtgtgaatatgccatatacgtacaagcgctaatcttgcgcctggaggggcag
atccagccatccctggagctgttccagagttgtgccatcctcaatcccaccagccccgac
aacctcaaacaagtggcccgctcgctttttctgctggggaaacacaaggcagccattgag
gtttatcatgaagctgggaagctcaatgagaaagactgggagatcaaccataatctgggt
gtatgctattccttcataaaagacttccaaaattctgaagagcagttaaatgcagccctg
cagttgaaaaaacacgacaggacattcatgacactgggaaaggtccacttgttggcggga
gacacgaacaaagccatcgaagtgtacaaaagtgcagtggagttctctccagagaatgca
gagttgctgaccactctggggctcctgtatctgcagttgggaaaataccaaaaagcattt
gaacatctcgggaatgcacttacttatgaccctaataactataaggcgatcctggcagca
ggcagtatgatgcagacccatggggactttgatgtggccatgaacaagtaccgcgtggca
gcgtgcatggtccccgagagccccccgctctggaacaacatcggcatgtgcttctttggc
aagaagaaatatgtagcagccatcagctgtctgaagcgggcccactacctgtctccgttt
gactggaaggtgctgtacaacctgggcctggtgcacctcaccatgcagcagtatgcctct
gccttccacttcctcagcgctgccaccaacctgcagccccgcctgggagaactctacatg
ctactagcagttgcactgaccaatctggaggacgtggacaatgccaggagatcctatgaa
caagctgtggctttagaccagtccaaccctctggtcaacctgaactttgccattttgctg
tacaaccacggggacaagaagggagccctgcaacagtaccaggagatggaaaggaaagtc
aacatactgaaggacagcaacactgagtttgaccctgagctaatggacatggctcagaag
atggccgctgccttgcaggtgggagagagcctggagtggaccaagccggtcaaagacccc
aagtctaagcagcgctcggctggggcccccagtaaaacccctggtagctcccagcagccc
ctaggcaccaaccaggccctggagcaggccatgtcctccgccgcaggctacaacaagagc
atcacactccctacaggagtgtccccccacagccagcccacgcccccctccctggccttg
gaggaggagcctgatgtggagaccacccccacccgagcccctcagccagaggagtcagac
ccctccaccaccctgccccctctggcagccaaacccaaagtcaagaagagcaagttgaag
caagagcggaactag
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integrated database retrieval system
