Salmo trutta (river trout): 115166955
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Entry
115166955 CDS
T08542
Name
(RefSeq) semaphorin-6D-like isoform X1
KO
K06842
semaphorin 6
Organism
stru
Salmo trutta (river trout)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
115166955
NCBI-ProteinID:
XP_029576786
Ensembl:
ENSSTUG00000024170
UniProt:
A0A674AMZ2
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Position
29:complement(13206932..13252493)
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AA seq
1150 aa
AA seq
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MVWRAGLLLSILLATATHTLSASFPEDSIPLDIVDAHFSRQYPVFRGRPSGNESQHRLDF
QLMTKIQDTLFIAGRDQVYLVSLRESYRNEIIPYRKLTWRSGEADRKNCAMKGKHRDECH
NYIKVLVPRNDDLVFICGTNGFNPMCRYYRLDNLEFDGEEISGLARCPFDAKQTNVALFA
DGKLYSATVADFLASDAVIYRSMGDGSALRTIKYDSKWLKEPHFLHAVDYGNYVYFFYRE
IAAEHNNLGKAVYSRVARICKNDVGGSQRVLEKHWTSFVKARLNCSVPGESFFYFDVLQS
ITDIININGVPSVVGVFTTQMNSIPGSAVCAFSMDDIEKVFRGRFKEQKTPDSVWTAFPE
ERLPKPRPGCCAGHGQAESYKTSIEFPDETLLFIKSHPLMDASVPNIGDEPWFTKTRVRY
RLTALAVDNAAGPHGNYTVLFIGSEAGVVLKVLAKTSPMSLNDSILLEEIDLFNRAKCLS
NSEDDRHILSLHVDRDTHSVYVAFSSCVVRMPLSRCERHTNCHKSCTASRDPYCGWMPHG
ACERILPGVLSGYEQDVEFGNTVQLGDCHVFLATTSATDYKSFGDPTSDMEMSSTSFTDQ
PSGPIHPPVPPVLTPTLSPHPGLGPRERPGLGPGAGSPDLYGSGFVQQDDPATSYSLESL
PGGLEGVWEVQAGEANQMVHMNILISCVLAAFLLGALVAGLVVFCYRDSFLRHKPRHAHK
DAESAPSCSDSTGSFAKLNGLFDSPVKEYQPSLDCPKLYTNLLSSGKDLTPNGDTKTMIL
RDGCQPPELAALPTPESTPVLQQKGLQPIRNQWERANHHGKINGSRKNSNSTSSSSIAKS
PQFHPSSSPPPHPQPQPHPALGHSHIPSAVVLPNATHEYRSGYHGNPADNITPPRTLDRK
PENMEHLQATPLHSKGSRKEQKRSLDARNTLNDLLKHLNDANTANASSKAILQEGAGSAP
RPSRQHLMLEPLGDITEVPPKVPSREASLYSPSSSSSLPRHSPTKRVDVPLPSTPSSPTG
SLGMGGSMSGTLERRYGSHHRSSSHRHSLTATSPNGVSMGVSLSHQHSMNRGGYMPPTPP
SRLDSQRGLHSPHQHPHPPSLSRQSSYSGHGSLPRQGLKRTPSLKPDVPPKPNAFTPQTP
QMRVVNKYSY
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atggtttggagagcaggccttctgctcagcatactgctagctacagccacacacaccctg
tctgccagcttcccagaggacagtatacccctggacattgttgatgcacacttctcgcgg
cagtacccagtgttccgaggtcgtccgtcggggaacgagtcacagcacagactggacttc
caactgatgaccaagatacaggatacactgttcatcgctggcagagaccaggtgtatcta
gtgagtcttcgagaatcctacaggaatgagatcattccctacaggaagttaacatggagg
tcaggcgaggcagacagaaagaactgtgccatgaaggggaaacacagagatgagtgtcat
aactacatcaaggttctggttcccagaaatgatgacctggtgttcatctgtggaacaaat
ggcttcaaccccatgtgccggtactacaggctggataacctggagtttgacggggaggaa
atcagcggactggcacgatgcccgtttgacgccaagcagaccaacgtcgctctgttcgct
gatgggaagctgtactcggcgacggttgctgactttctggcgagcgacgcagtgatctac
cgtagtatgggtgacggctcggccctcaggaccatcaaatacgactccaaatggctgaaa
gagccccatttcctgcatgcagtggattatgggaactatgtctacttcttctacagagag
atcgcagcggaacacaacaacttgggcaaggccgtctactccagagtggctcgtatctgt
aagaacgacgtaggcgggtcccagcgtgtgttggagaaacactggacgtccttcgtcaag
gccagactcaactgttctgttcctggagaatcgttcttctacttcgatgttctacagtcc
atcactgacatcatcaacatcaacggagttccttctgtggtgggagtcttcactacacag
atgaacagtatcccagggtctgcagtgtgtgcgttctccatggatgacatagagaaggtg
ttcagaggacgatttaaagaacagaaaacacctgactctgtctggaccgccttcccagag
gagagactgcccaaacccaggccaggctgctgtgcgggtcatggccaggctgagtcctat
aagacctctatagagttccctgatgagaccctcctcttcatcaagtctcaccccctcatg
gacgcctccgtgcctaacataggagacgagccctggttcaccaagacacgcgtcaggtac
aggctgacagccctggcggtggacaacgcggctggtccacatggtaactacacggtgctg
ttcattggttcagaggcgggcgtggtgctgaaggttctagccaagacttcccctatgtcc
ctaaacgacagcatcctattggaggagattgacctgttcaacagagccaagtgtctgtct
aacagtgaggatgacaggcatattttgtcgctccatgttgacagagacacacacagtgtg
tatgtagctttctctagctgtgtggttcgcatgccgctcagccgctgtgagcgacacact
aactgccacaagtcttgtacagcgtccagggacccctactgtggctggatgcctcatgga
gcctgtgagaggatcctgcctggagttctgtctggttatgagcaggatgtagagtttggg
aacacggttcagctgggagactgccatgtgtttttggccactacttcagcgacagattac
aaatcatttggtgacccgacctctgacatggagatgtcatctacgtcattcacagaccag
cccagtgggcccatacaccccccagtacccccagtactcacccccaccctgagcccccat
cctgggcttggtcccagggaaaggcctgggttggggcctggggctggttctccagacctg
tatggctcagggtttgtgcagcaggatgacccggccacctcctattcactagagtcactc
ccagggggcctagagggtgtgtgggaggtccaggcgggagaagccaatcagatggtccac
atgaatatcctgatcagctgtgtgttggctgccttcctcctgggggcgttagtggcaggc
ctggtggtgttctgctacagagactccttcctccgccacaagccccggcacgcccacaaa
gatgcagagtcagccccctcctgcagcgactccaccggatccttcgctaagctcaacggg
ctcttcgacagtcctgtcaaggagtaccagccaagtctggactgtcccaagctgtacacc
aacttactgagcagtggtaaggacctgacgcctaacggagataccaagaccatgatcctc
cgggacggctgtcagccccccgagctggccgccctgcccacccccgagtctacgcctgtg
ctgcagcagaaaggcctgcagccaatcaggaaccagtgggagcgagccaatcaccacggg
aagatcaacggatccaggaagaactccaactctacctcctcctcctccatcgccaagagt
ccccagttccaccccagttcctccccccctcctcacccccagccccaaccccaccctgcg
ctgggacactcccacatccccagtgccgtcgtccttcccaacgccacgcacgaataccgc
agtggttaccatggaaacccagccgacaacatcacgccgccgcgcaccctggacaggaag
ccagagaacatggaacacttgcaggccacaccccttcattctaaaggaagcaggaaggag
cagaagaggtcgctggatgccaggaacacactgaacgacctgctgaagcacctgaacgat
gctaacacggctaacgctagctccaaggctatcctccaagagggggccggctcagcgccc
cgacccagcagacaacacctgatgctggagcctctaggggacatcactgaggttcccccc
aaggtccccagccgagaggcctctctttactccccctcctcctcctcctccctgcccagg
cacagccccaccaagagggttgacgtccccctgccctccacccctagctcccccacaggc
agcctgggtatgggaggaagcatgagcggcaccctggagaggaggtacggctctcatcac
aggagctcttctcacagacactccctcaccgccacctctcccaacggggtcagtatgggg
gtgtcgttgtcccaccaacacagtatgaacagaggggggtacatgccccccacccctccc
tccagactggactcccagagggggctccactccccccatcaacacccccaccccccctcc
ctgtcccgccagagcagctacagtgggcacggctcactccctcgccaggggcttaaacgg
accccgtccctaaaacctgacgtcccccctaaacccaacgccttcaccccacagactcct
cagatgagggtggtcaacaagtacagctactag
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