Salmo trutta (river trout): 115167019
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Entry
115167019 CDS
T08542
Name
(RefSeq) iroquois-class homeodomain protein irx-3-like
KO
K24889
iroquois-class homeodomain protein IRX
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115167019
Transcription factors [BR:
stru03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
115167019
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MRP-S32
Motif
Other DBs
NCBI-GeneID:
115167019
NCBI-ProteinID:
XP_029576889
Ensembl:
ENSSTUG00000049808
UniProt:
A0A674EWL1
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All DBs
Position
29:16664053..16667505
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AA seq
460 aa
AA seq
DB search
MSFPQLGYQYIRPIYPPERQGISNARAGTELSPSGALSNVLSTMYGSPFAAAAQGYGAFL
PYSNDISIFNQLGAQYELKDSPGVQGHPGFAHHHPAFYPYGQYQFGDPSRPKNATRESTS
TLKAWLSEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWTPRSRTD
EEGNVYNSDHEEGEEGDKREDEEEIDLENIDTENIENKDDLDDQDDLHADLKLDGRSDSE
ISDGYEDLQGPDQRFLKAVAKEGKDIHVDRGEHFHHHHHHSFEIKASQPNGEQVKLNPVS
INSPPSENAAPALKPKIWSLAETATTPDNPRKSPQMNGSNTVGSAAQTIISPHHRLISCP
VGKIQNWTNRAFSAHQLALLNSNHYLGLANQASANGLALYSRQQHQHTQDKSHSSDTAVT
ERSSALEAEKKLLKTAFHPVHRRPQNQLEAAVVLSALASS
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcccgcagctgggatatcagtacatccgaccgatatacccaccggagcgccag
ggtatcagcaacgcccgagccgggacggagttgagcccgtccggggcactctcaaacgtt
ctctcaactatgtatggatcacctttcgccgcagcagcacagggctatggagcatttctg
ccctattcaaacgatatatccattttcaatcaattgggtgctcagtatgagttgaaagac
agtccaggtgtccaaggacacccaggatttgcccaccatcacccagcgttttacccatat
ggccagtatcagtttggtgacccgtccagacccaaaaatgcgaccagggagagcacgagc
acactgaaggcctggctgagcgagcaccgtaagaacccctaccccaccaagggggagaag
atcatgctggccatcatcaccaaaatgaccctcacccaagtttccacctggttcgccaac
gccaggaggaggctaaagaaggagaacaagatgacctggactccccggagccgcacagac
gaagagggaaatgtttacaacagtgatcacgaggagggagaggaaggggacaagagggag
gatgaggaagagattgatttagaaaatatcgacacggaaaatatcgagaataaggacgac
ttggatgatcaggatgacctacacgctgatttaaaattagatggtagaagcgactctgag
atttcagacggctatgaggatttacaagggcccgatcagagatttctgaaggctgtagcg
aaggagggcaaagacattcacgtggaccggggcgagcacttccaccaccaccaccatcac
tcttttgaaattaaagcctcacaaccgaatggcgaacaagtgaaactgaatcctgtgtcc
atcaactcgcccccatcagaaaacgcggccccggccctgaagccaaagatttggtctttg
gcggagacagcaacaactcctgacaatccccgcaaatctccacaaatgaacggcagcaac
acagttgggtccgcggcccagaccataatcagccctcaccacagactcatctcttgtcct
gttggaaaaatccagaactggacaaaccgagctttttctgcccaccagctcgcattactg
aactctaaccattaccttggactggcgaaccaggcttcggctaacgggctcgccctctac
agcaggcagcaacaccaacacacgcaggacaagagtcatagctcagacacagccgtcaca
gagagatctagtgccttggaagcagagaaaaagttgttaaaaacagccttccacccagtt
catagacggcctcagaaccaactcgaggcagcggtggttctatcagctctcgcctcctcc
tag
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