Salmo trutta (river trout): 115167021
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Entry
115167021 CDS
T08542
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9-like isoform X1
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
stru03036
]
115167021
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
115167021
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HTH_CHD1_Hrp3
HDA2-3
Chromo_MIT1
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
115167021
NCBI-ProteinID:
XP_029576899
Ensembl:
ENSSTUG00000004537
LinkDB
All DBs
Position
29:17110919..17237903
Genome browser
AA seq
3091 aa
AA seq
DB search
MTDPIMDFFDDPNLFVGGLDGLAEEGFPPGPSLVDELNLSVGFEPLQVEPMGAGKHPGTI
PTSMPSSTQQSMAYGQQMGHFPGMKAQNSMGQPFAGSEGVGGGGMIAAQHTQFHGRSIGQ
APQSNALFSNSSPMWGNQDQNGNLYHSVPQQQQQLHQQQQQQLHNQQHHLRQPQPQQQHH
PCQQQLQQQQVQQLQQQHQLLNQRQQQHLHQQVVNPQSLPQQHHSFPFHQANQQPAPHNQ
QLTTGGTLFHSRAVPNTGALAKANVETPNVSLAGTPPQQGGYQLVQGTQGAFPGVGPEDS
SMSFSMQTSSPMAHTLSSCSVSSTTAYPPSQYSFPGQGQPGISSLSQPLSLAPVSMITTT
TPLPSSVPELSLAGAGCAFSSAPGMTQHHQPEQVPVSQVEDECPFRALRCSRQTQGNYDS
SEMFGQAMSCYPSAVSQLVPDQHQPQNCGSNLEVTRPPASTTTTNGYVSLEVSLAGLQGE
VEAQGGGFEGLEAPDLLADELLPQLGAALSQHDHHDSNCSWTNGGDGERNGKGEEEEEMK
EEDRISISMDYKIQPPKNKNANGPNSHTAARVLSPPMKSSSSSSSSSSYSSSLEKRAQRR
LVKEQREQQQQQLMEEAGEDKQQKANRIIHEAIAKARERGEKNIPRVMSPESFPSGSSSA
HRRERDRDRDRERDRGNKTRTKASKKARIVSSSKPKQKAKIGKIVIKFGGMKKKRETESS
EEGSDEERPPRRSFKDDDSTRRSNRQVKRKKYAEEGEARVSDEEVKVMVKAKKTSTAAAR
KEPAQQLFVENPSEEDAAVVDKIMSSRIVKNEVAPGVIVEVEEFFVKYKNYSYLHCEWAV
EQQLEKDKRIQQKIKRFKIKQAQRAHFFADMEEDPFNPDYVEVDRVLEVSYCEDKDTGEQ
VVYYLVKWCSLPYEDSTWELKGDVDQSKIEEFELLQAARPDSRRTERPPASLWKKRDQSR
EYRNSNVLRDYQLEGVNWLLFNWYNRRNCILADEMGLGKTIQSITFLEEIWRVGIRGPFL
VIAPLSTIANWEREFRTWTHLNVIVYHGSMVSRQMLQQYEMYSRDTQGRVVRGAYKFHAL
ITTFEMILGGCPELNAIEWRCVIIDEAHRLKNKNCKLLEGFKLMNLEHKVLLTGTPLQNT
VEELFSLLHFLEPQSFPSENTFMLEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAP
KEETIIEVELTNIQKKYYRAILEKNFSFLSKGVGQANVPNLVNTMMELRKCCNHPYLIKG
AEEKILEDFREVYSPVAFDFHLQAMVQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLD
ILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADT
CIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLITRNSYEREMFDRASLKLGLDKAVLQ
SMSGRENSVPGGGPTQQQLSKKEIEDLLRKGAYGALMDDEDEGAKFCEEDIDQILQRRTK
TITIESEGRGSTFAKASFVASGNRTDISLDDPNFWDKWAKKAEIDMDTANGRNSLVIDTP
RVRKQTRPFSATKDELAELSEGESDNEDKPKLRRPHDRLNSYGRTECFRVEKNLLVYGWG
RWKDILLHGRFKKQLTERDVESICRALLAYCLVHYRGDDKIKSFMWDLIAPSEDGQTKEL
QNHLGLSTPVPRGRKGKKMKTQSSTFDIQKAEWIRKHNPEHMLQDEGYKKHLKHHCNKVL
LRVRMLYYLKQEVMGSQSQKILDGVDSSEIKIWVPEPDSSELPALWWDNISDKCLLLGVY
KHGYEKYNTVRADPALCFLERVGRPDEKAIAAEQRANDFMDGDVDDPEYKPAPALLKDDM
EDDASSPGDLVVTDNPGEGAPVMMEGLGGGGGGGGGDAAYWPSSSVLTARLRRLITASQR
YTKSRQILHIHQTQHTTQVTPSLCPLPPALNDTINPKMAAKIERQQRWTRREEADFYRVV
STFGVVFDPDLGRFDWTKFRAMARLHKKTDESLQKYLWAFTAMCRRVCRLPPREGDTAVD
PSLSIQPITEERASRTLYRVELLRQVREQVLRHPLLYERLPLCQLGSDLPVWWETGTHDR
DLLIGAAKHGVSRTDYHILRDPELCFMAAQRNYSQNKGVQQPSQTPTPLLNPQYQASRDP
ALAESPVPTPAQMEREDIPGAVPKEEPLSEGEERMERGGQVERWSPQPAPLTPTGIEEKP
DLGVVKGENESHMVAARTKPLTPNSAARKEKKANKRSRREARRAASAASDSDSDGSSSSS
SSRSSSSSSSSSSSSSRSGSSSSSSSSCSSGSSSSSSSSSSSSVDSESEGEEGKTKVPTV
TSVKGFDEDSVASLSTTQDEMQDSHVTENGSNNSHHHPFQGGYMLAASYWPKDRVMINRL
DSICQAVLKGKWPGARRSYEAGGAVASFYTTKLLDNAAAANNNSNLCSASASASEDPSAS
PQGSKVKKHVAGEKEFSVKMNEQEGGLKLTFQKQGSGQPLKRPLEPEEGPLSQQQYLTRL
HELQSASDTSLADFTKPQAASFPQASTGLAGQMKLNGGMDGQPVVKRRRGRRKNVEGMDL
LFMNRKRGPAVPESVPPTWGGMSQAGTGLSIASGQGNPLGGQGPMDTESRVSVINLKDGT
RLAGDDAPKRRELELWLKEHPGFVADTGAFIPGVNKRQLEQFQQDGRPKQKRHRCRNPNK
IDVNSLTGEERVQIINRRNARKVGGAFAPPLKDLCRFLQENPEYGVPPEWADVVKQSGYL
PESMFDRILTGPIVPEEVSRRGRRPKSALAKAAATANQGGPSLGLNPLLANGLLSGMDLS
SLQAFQQNLQSLQSLQLTAGLMGLPTDANNLAAMFPMMLSGMAGLPNLLSMGGLLGKPTQ
DATGGAEQRKRKKGSRERGGGGEPSSASSKAPSSSHSHGPSHTSDTKGERTEGQSRDGDG
RIPSVHSPSSSSATTSTTTPLSASAAQAASSHPLSLNPLLLSSMLYPGMLLTPGLNLPVS
TTQPPHSDSNSDHKPHKPTKTSQTAPSKPLSPRRTPERQEEEGLGDKREESGEHKEENSG
PEGSGKAESSSSESGSSSSSSDGSSDSSDED
NT seq
9276 nt
NT seq
+upstream
nt +downstream
nt
atgacagatcccatcatggacttctttgacgaccccaacctgtttgtgggagggctggac
gggctggctgaggagggcttcccccctggaccctcgctggtggatgagctgaacctcagc
gtaggctttgagcccctacaggtggagccgatgggggcagggaaacaccccgggacgata
cccacctccatgccctcctccacccaacagagcatggcttatgggcagcagatggggcat
tttccaggcatgaaggctcagaactccatggggcagcccttcgctggctctgagggtgtg
ggtggtggagggatgatagcagcacagcatacccagttccatggacgctcaattggtcag
gcaccccaatccaacgcgttgttttccaacagcagccccatgtggggtaaccaggaccag
aacgggaacctctaccactcagtaccccagcaacaacaacaactacatcaacaacagcag
cagcaactccacaaccaacagcatcacctccgacagccacagccacagcagcagcaccac
ccttgtcaacaacaacttcagcaacaacaagtgcagcagttacagcagcaacaccagctt
ctgaaccagcggcagcagcagcaccttcatcaacaggtagtgaaccctcagtctctgccc
cagcagcaccacagcttccccttccaccaggccaaccaacagccagctccccacaaccag
cagcttaccaccggggggaccctgttccactccagggctgtgcctaacacaggggctctg
gccaaagctaatgtggaaacccccaatgtctcgctggctggaaccccaccacagcagggt
ggctaccagctggtgcaggggactcagggggcctttcctggggtagggccagaggactct
agcatgtccttctccatgcagacctcctcccccatggctcacaccctgtcctcctgctca
gtgagctccaccaccgcctaccctccctcccaatactccttccctggccagggacagcct
ggcatctccagcctgagccagcctctctctttagccccagtgtccatgatcaccaccacc
actcccctgccctcctcagtgcctgaactctctcttgcaggagctggatgtgcattttca
tctgctccagggatgactcagcatcatcaacccgagcaggtcccagtcagccaggttgag
gacgaatgtcccttccgggctctgcgctgctccaggcagacccaagggaactacgactca
tctgagatgtttggccaggccatgagctgctaccccagtgcagtcagccagctcgttcca
gaccagcaccagccccagaactgtggatctaacttggaagttaccagacctccggccagc
accactaccactaacggctacgtgtctctagaggttagcctggcagggctgcaaggggag
gtggaggcccaaggagggggctttgagggcctggaggctccggacctgctggctgatgag
ctgctgccccagctgggggctgccctcagtcagcacgaccaccacgactccaactgttcc
tggactaatggtggggatggagagaggaatggaaagggagaggaagaagaagagatgaag
gaggaagacaggatctccatatccatggactacaagatacagcctcccaagaacaagaat
gctaatggtcccaacagccacacagcagcgcgggtcctcagccccccgatgaagagcagc
tcatcctcctcgtcttcgtcctcctacagctcgtcgttggagaagcgggcccagcggagg
ctggtgaaggagcagagggagcagcagcagcagcaactgatggaggaggctggggaggac
aagcagcagaaggctaacaggatcatccatgaggccattgctaaggcccgggagagagga
gagaagaacatccccagggttatgagtccagagagcttcccctctgggagctcctcggcc
cacaggagagagagggacagagacagagacagggagagggaccgaggcaacaagaccagg
accaaggcctccaagaaggcccgcattgtgtcctcgtccaagcccaaacagaaggccaag
atcgggaaaattgtcattaaatttggagggatgaagaagaagagggagacagagtcttca
gaggaggggtctgatgaagagcgtccgcctcgaagatcctttaaagacgatgactcgacg
cgtcggtcgaaccgccaggtgaagaggaagaagtatgcagaggagggagaggccagggtg
tctgatgaggaggtgaaggtcatggttaaagccaagaagaccagcactgctgcagcacgc
aaagagccagcacagcagctgtttgtggaaaaccccagtgaggaggatgctgcggttgtt
gacaagatcatgtcatctcgaatagtcaagaacgaggtcgctccaggagttatcgtagaa
gtggaagagttctttgtaaaatacaaaaactactcctacctccactgtgagtgggccgta
gagcagcagctggagaaagacaagaggattcagcagaagatcaaacgtttcaagattaaa
caggcacagagagcccacttctttgcagatatggaggaggatccctttaaccctgactat
gtggaggtagacagagtactggaggtgtcctattgtgaagacaaggacacaggagagcag
gtggtgtactacctggtgaagtggtgctctctgccctatgaagacagtacgtgggaactg
aagggggatgtggaccagagtaaaatagaggagtttgagctgctgcaggcagcaaggcca
gactcccgcaggacggagcgtcccccagccagcctgtggaagaagagggatcagtcgagg
gagtacaggaacagtaacgtcctcagggactaccagctggagggagtcaactggctcctc
ttcaactggtacaacagacggaactgtatcctggcagatgagatgggtctggggaagacc
atccagtccatcacgtttctggaggagatctggcgcgtgggcatcaggggccccttcctc
gtcatcgcccccctctccaccatcgccaactgggagagggagttcagaacgtggacccac
ctcaacgtcattgtctaccacggctccatggtcagcaggcagatgctgcagcagtacgag
atgtactccagggacacacagggtcgtgtggtgcggggagcctacaagttccacgccctc
atcaccacctttgagatgatcctgggcggctgtcctgagctcaacgccattgagtggcgc
tgcgtcatcatcgacgaggcccatcgcctcaagaacaagaactgcaagctgctagagggc
ttcaagctcatgaatctggaacacaaagtcctcctgacagggacccccctccagaacacg
gtagaggagctgttcagtctgctgcacttcctggagcctcaaagcttcccctcagagaac
accttcatgctggagtttggagacctcaagactgaggagcaggtccagaagttgcaggcc
atcctaaagcccatgatgctgcgtcgtctcaaggaggacgtggagaagaagctggctcct
aaggaggaaaccatcattgaggtggagctgaccaacatccagaagaagtactacagagcc
atcctagagaagaacttctccttcctgtctaaaggagtcggccaggccaacgtccccaac
ctggtcaacaccatgatggagctgaggaagtgctgcaaccacccctacctcatcaaaggt
gctgaggagaagatcttggaggacttccgggaggtgtacagccctgttgcctttgatttc
cacctgcaggccatggtgcagtcggctggtaaactggtcctcatagacaagttgctgccc
aagatgaaggccgggggacacaaggtcctcatcttctcccagatggtccgctgtctggat
atcctggaggactacctcatccagagaaggtacctgtatgagcgtatcgatggcagagtg
agaggtaacctgcgtcaggcagctatagaccgtttcagcaaaccagactcggaccgcttt
gtgttcctgctgtgtacccgggctggaggtctgggcatcaacttgactgctgctgatacc
tgtattatctttgactcagactggaacccacagaatgacctgcaggcccaggctcgctgc
cataggattggtcagaacaaggcggtgaaggtgtaccgtctgatcaccaggaactcttac
gagcgggagatgtttgaccgggccagcctcaaactgggcctggacaaggctgtgctgcag
agcatgagtggcagggagaacagcgtgccaggaggagggcccacccagcagcagctgtct
aagaaggagatcgaggacctgctgaggaaaggggcgtatggagctctgatggacgatgag
gatgagggggccaagttctgtgaggaggacatcgaccagatccttcaacgcaggaccaag
accatcaccatcgagtctgagggacggggatctacctttgccaaggccagttttgtggcg
tccggaaaccgcacagacatttctctggacgaccccaacttctgggacaagtgggccaag
aaggctgagattgacatggacactgccaatggcagaaacagcctggtaattgacactccg
agggtgaggaagcagacccgacccttcagtgccactaaggacgagctggcagagctgtca
gagggtgagagtgacaacgaggacaagcccaagctccgccggccccacgaccgcctcaac
agctacggcaggacggagtgcttcagagtggagaagaacctactagtttacgggtggggt
cgttggaaggacatcctgctccatggtcgttttaagaagcagctgacagagcgtgatgtg
gagtctatctgcagagcccttttggcctactgtctggttcactaccgcggtgacgacaag
atcaagagcttcatgtgggacctgatcgccccctctgaggacggacagaccaaggaacta
cagaaccacctgggtctgtcgaccccggtccccagaggcaggaaggggaagaagatgaag
actcaatctagcacgtttgacatccagaaggctgagtggatcaggaagcacaacccagaa
cacatgctgcaggacgagggatacaagaagcacctcaaacaccactgcaacaaggtgttg
ctgcgggttagaatgctctactacctgaaacaagaggtgatgggaagccagtcacagaag
atactagacggcgtggactccagtgagatcaagatctgggttcctgagcccgacagctct
gagctaccagccctgtggtgggacaacatttctgacaagtgtctgctgttgggggtctac
aagcacgggtatgagaagtacaacacggtgcgtgcagaccctgccctctgcttcctagag
cgggtgggccggccagacgagaaggccatcgctgctgaacagagagccaatgacttcatg
gatggggacgtggacgatccagaatacaagcctgccccagccttgctgaaggacgatatg
gaggatgacgcctcctctcctggagacctggttgtcacagacaaccctggagagggtgct
ccagtgatgatggaggggttaggtggaggaggaggaggaggaggaggagatgcagcctac
tggccctcctcctcagtactaacagccagactgagacgtctgatcacagcctctcagcgc
tacaccaagtccagacagatcctccacatccaccagacccagcacaccacccaggttaca
ccctcactgtgccccctgccacctgccctcaacgacactatcaaccccaagatggccgcc
aaaatagaacgccagcagagatggacgaggcgagaggaagctgatttctaccgtgtggtg
tctacctttggtgtggtgtttgacccagacctgggccgtttcgactggaccaagttcaga
gccatggctcggctgcacaagaagacagacgagagtctgcagaagtacctgtgggccttc
actgccatgtgcaggagagtgtgtcgcctgccacccagagaaggagacacagcggtggac
ccctctctgtccattcagcccatcacagaggagcgtgcatctcgtaccctctacagagta
gagctgctacgccaggtcagggaacaggtcctgcgccaccccttgctctatgagcgcctg
cccctgtgccagctgggctcggacctgcccgtgtggtgggagaccggtacccacgaccga
gacctcctaatcggggccgccaagcacggcgtcagccgcacagactaccacatcctccga
gacccagagctctgcttcatggctgcccagcgcaactacagccagaataaaggagtccaa
cagccatcccagacccctactccgctcctgaacccccagtaccaggctagtagagaccca
gccttggcagagtccccagtgccaaccccagcccagatggagagggaggacatcccgggg
gcagtgcccaaagaagaacctctctcggagggggaggagcgcatggagagagggggtcag
gtggagaggtggagtccccagcctgcccctctcacccctacagggatagaggagaagcct
gacctgggggtggtgaaaggagagaacgagagccacatggtggcggcacggaccaagcca
ctcacgcccaactcagccgccaggaaagagaagaaagccaataaaagaagtcgaagagag
gccagacgagccgcctcggcagcgtcagactccgactcggacggctcctcctccagctct
tcatcacgatcttcttcatcatcgtcatcatcgtcctcttcctcctcacgctccggatcc
agctcctcttcatcttcatcctgctcatcaggctcctcatcttcctcttcctcatcttca
tcttcctctgttgacagtgagagtgagggagaggaaggaaagaccaaggtcccgacagtt
accagtgtgaagggatttgacgaagacagtgtggcgtctctcagcaccactcaggatgag
atgcaggacagtcatgtgacagagaacggcagcaacaactcacaccaccaccccttccag
ggaggatacatgctggctgcatcctactggcccaaggaccgtgtgatgatcaaccgtctg
gacagtatctgccaagcagtgctcaaggggaagtggccgggggcccggcggtcgtacgag
gcaggaggggccgtagcctccttctacaccaccaagctgctggacaatgcagctgcggcc
aacaacaacagcaacctctgctcagcttccgcctcggcctcagaggacccttctgcctcc
cctcagggttcaaaggtgaagaagcatgttgcaggagaaaaggagttctcagtgaaaatg
aatgaacaggaggggggtctgaagctgaccttccagaagcaggggtctggccagcccctg
aagaggcccctggagcctgaggaggggcccctgagccagcagcagtaccttacaaggctc
catgagctccagagtgcctcagacaccagtctggctgacttcaccaagccccaggctgcc
agcttcccacaggcctctacaggtctggcgggtcagatgaagctgaacggcggtatggac
ggccagccggtggtgaagaggaggagaggaaggaggaagaatgtggaggggatggacctg
ctctttatgaacaggaaaagaggaccagccgtgcctgaaagcgtgcccccgacgtggggt
ggtatgagtcaggctggcactgggctgtctattgcctcagggcagggtaaccccctaggg
ggccagggccctatggacacagagagcagggtctctgtcatcaacctgaaagatgggacc
cgtctggccggagacgatgcccccaagaggagggagctggagctgtggctaaaagaacac
ccaggctttgtggccgacacaggggccttcatccctggagtgaataagaggcagctggag
cagttccagcaggatggtagacccaaacagaagaggcatcgctgcagaaaccctaacaag
atcgatgtcaacagtctgacaggagaggagagggtccagatcatcaacaggagaaatgca
cgcaaggttggtggggccttcgccccccctctaaaggacctctgtcggttccttcaggag
aacccagagtacggggttccaccagagtgggccgacgtcgtcaagcagtcgggctacctc
ccagagagcatgtttgaccggatcctgacaggacccatcgtaccagaggaggtgagtcgg
cgtggacggaggcccaagagcgccctggccaaggctgcagctacagccaaccaggggggc
ccatccctgggcctcaaccccctgctggccaacggcctcctctctggcatggatctatct
agtctacaggccttccagcagaacctccaaagtctccagtcactgcagctcactgccggc
ctcatgggcctgcccaccgatgctaacaacctggccgccatgtttcccatgatgctctct
ggcatggctgggcttcccaacctccttagcatggggggtctgctggggaagcccacacag
gacgccacggggggagctgagcagaggaagaggaagaagggaagcagagaaagaggagga
ggaggggagccctcgtctgcctcctccaaagccccctcctcctcccactcccacggccca
tcccacacctcggacaccaaaggtgaaaggacagaaggtcaaagcagggacggagatggc
cgcatccccagtgtccattccccctctagttcctctgccaccacctccaccaccacccca
ctaagtgcttctgctgcccaggcagcctccagtcaccctctgtctcttaaccccttgtta
ctctccagtatgctttacccagggatgcttctcactccaggccttaaccttcctgtgtcc
accacacagccaccacacagtgactcaaacagtgaccacaaaccccacaagcccactaag
acctctcagaccgccccctcaaaacctctgtcgccaaggagaacaccagagcgtcaggaa
gaggagggtcttggtgacaagagggaagagtcaggggaacacaaggaggagaacagtggt
ccagaaggctcggggaaggcggagtcatcttcatcagagtctgggagctcttcttcatca
tctgatgggtcatcagactccagcgatgaagactga
DBGET
integrated database retrieval system
