Salmo trutta (river trout): 115167041
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Entry
115167041 CDS
T08542
Name
(RefSeq) Wilms tumor protein 1-interacting protein homolog
KO
K16682
LIM domain-containing protein
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115167041
03036 Chromosome and associated proteins [BR:
stru03036
]
115167041
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
115167041
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Sister chromatid separation proteins
Aurora kinases
Regulators of Aurora kinases
115167041
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
115167041
NCBI-ProteinID:
XP_029576935
Ensembl:
ENSSTUG00000011912
LinkDB
All DBs
Position
29:18404954..18434425
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AA seq
717 aa
AA seq
DB search
MDHYEEDLGLRASKLMEDLSLYEAYKDGMYSSRRDMVINPDLDFSSPTIPEQKSTTMNGS
SAPHQQIHSVENYMSGNKVYTAAPVRPVNGNRAVPVDYCTPQRDIVYPNEDSYCTKSEIA
LPCYSGASERHRRYSLEVQGHRYSTGSAYDGVVLNKPVPSPGNRCNSICVTTSHDGRYNA
TSPRSSFASSLSSQEQSKHASPRSSISSPRTSLVVPGQDKYTSPRSSLVHCDGSSALSPR
SSYASTASDTSKHSSPRASLNSYDCCSKPSSNRTSGISMGYDQRHISPRSSTASQYSCTT
SPRSSYSDSRYMPVGNHDLEGAVLHGIPVASPRSSICSQDGCARPGTIANCVVSPRSSIS
SHSSRSSRSSRGSMSTYPDLQLPSPRSSMLGTGLQDDILTQDCGDTNGVHSRIHLQALSG
MPEALPQHAPQQSTQAGMNTEVTAGSPSSSYGLHTKTPASGQRFKLPYQVTPCRESGPSQ
AERSLEALTLELEKELEMHMKKEYFGICIKCGKGVYGASQACQAMGNLYHTNCFTCCSCG
RRLRGKAFYNVNGKVYCEEDFLYSGFQQTAEKCFVCGHLIMEMILQALGKSYHPGCFRCV
VCTEGLDGVPFTVDVENNIYCVKDYHTVFAPKCASCNQPILPAQGSEETIRVVSMDKDYH
VECYHCEDCGLQLNDEEGHRCYPLDCHLLCHGCHIRRLKVPVPAHPPPSYPLHVTEL
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atggatcactatgaggaagatttgggactccgggcgagtaaattaatggaggacctttcc
ttatatgaagcatacaaggatggaatgtacagttcaaggagggacatggttatcaacccc
gatttggatttttcgtctccaacgatacccgagcagaaaagtacgacaatgaatggcagc
tctgcgcctcaccaacagatacacagcgttgagaattacatgtctgggaataaagtgtac
actgcggctcccgtgcgccccgtgaatggcaacagagccgttcctgtggattattgcacc
cctcaaagagacatagtttatcctaatgaagatagctattgcaccaaatccgaaattgct
ttgccgtgttatagcggcgcgtccgagcggcacaggaggtactccttggaggtgcagggg
cataggtacagcactggtagcgcgtacgatggagtggttttgaacaagccagtaccttca
cctggcaacagatgcaacagtatctgtgttaccaccagccacgacggcagatacaatgct
accagcccgcggtccagtttcgcatcctccctctcctcccaggagcaaagcaaacatgca
agcccgaggtcgagcatcagtagcccgcgcacgagtttggtggtacccggtcaagacaag
tacactagtcctaggtccagtctggtacactgtgacgggagcagtgccctcagcccccgg
tctagctatgcaagtacagccagcgacacaagtaaacattccagcccaagggccagtctg
aacagctatgactgctgcagtaagcccagcagtaaccgcaccagcggcatcagtatgggc
tacgaccaaaggcacatcagccccaggtccagcacagcgagccagtattcttgtaccacc
agtccacgctctagctattcagattcgcgttacatgcctgtggggaaccatgatctggag
ggtgcagttttgcatggcattccggtggccagtccccggtcaagcatctgcagccaggac
gggtgcgcaagacccgggacaatagctaactgcgtcgttagtccccggtccagtatctcc
agtcacagttccagaagttcccggagctccaggggatctatgagcacctacccggatctc
caactaccttcacccaggtcctcaatgctggggactggtttgcaggatgacatactaaca
caagattgtggcgataccaacggtgttcatagtcgtatccatctccaagcgctctctggg
atgccagaggccctgccacagcatgcaccacaacagtcaacccaggcagggatgaataca
gaggtgaccgctggatcaccatcatcttcttatgggctccatacgaaaacaccagcctca
gggcagaggtttaaactaccttaccaggtgaccccgtgccgggaaagtggcccaagccaa
gcagaaaggagtctggaagcactcaccttggagctggagaaggagttagaaatgcacatg
aaaaaagaatactttggtatctgtataaagtgtgggaagggtgtgtatggagccagccaa
gcctgtcaggccatggggaatctgtaccataccaactgcttcacctgttgctcctgtggg
aggaggctgagagggaaagctttctacaacgtcaacggcaaggtctactgtgaagaggac
ttcctgtactctggctttcagcagacggcagagaagtgctttgtatgtggtcacctcatc
atggaaatgatcctacaggcactgggaaagtcctaccaccctggctgcttccgctgtgtg
gtctgcacagagggtctggacggagtgcctttcactgtggacgtggagaacaacatctac
tgtgttaaagactaccacacggtctttgccccaaaatgtgcctcatgcaaccagcccatc
ctccctgctcagggctctgaggagaccatccgggtggtgtccatggacaaggactaccat
gtggagtgctatcactgcgaggactgtggcctccagctaaacgacgaggagggtcaccgc
tgttaccccctggattgccacctgctctgtcacggctgccacatccgcaggctaaaggtc
ccggtgcccgcccacccgccccccagctacccactacacgtcactgagctgtga
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