Salmo trutta (river trout): 115167052
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Entry
115167052 CDS
T08542
Name
(RefSeq) thrombospondin type-1 domain-containing protein 4-like isoform X1
KO
K23377
thrombospondin type-1 domain-containing protein 4
Organism
stru
Salmo trutta (river trout)
Pathway
stru04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
115167052
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
stru04990
]
115167052
Domain-containing proteins not elsewhere classified [BR:
stru04990
]
Thrombospondin domain-containing proteins
ADAMTS-like proteins
115167052
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
ADAMTS_spacer1
TSP_1
PLAC
TSP1_spondin
TSP1_CCN
ADAMTS_CR_3
Motif
Other DBs
NCBI-GeneID:
115167052
NCBI-ProteinID:
XP_029576953
Ensembl:
ENSSTUG00000012959
LinkDB
All DBs
Position
29:complement(19020915..19063687)
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AA seq
634 aa
AA seq
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MLSGLALLLLVCLLHMFVTAQGNPWSQSLGCDEYLGSGKVMDKCGVCGGDNTACKLVSGL
FQQHSLNKVGYHKIVEIPEGATKINVTETVKSRNYLALKSRSGRSIINGNWAIDRPGKYE
GVGTMFTYRRPNEVTSTAGESFLAEGPTNEILDVYVIYQQPNPGVSYEFILPSDNPPQHP
DHRPGGNTLHGQSGNDHRGNPNQEGYDLAGEGKYPPQVPNNQVPAVQPPKRQREYNWKLS
GATECSASCGRGSRYTIFHCVHRLSHEHVPENQCDSSTRPSSQEEPCNLQSCPAFWDIGE
WSECSKTCGLGMQHRQVLCRQVYANRTLNVHTSRCRHLEQPETTSTCQLKICSEWQIRTE
WSACSVPCGVGQRTRDVHCVSNVGDFVSDEECNMKLRPSDNENCDMGPCAKSWFFTEWGN
KCSAECGMGIRIRGVLCLTNHISSLPLEGCGHERPTDSQVCNHGPCESRIEWFTAPWSQC
STECGSGSQQRAVVCLMKSDEGFNVMPPYECSSLDKPLNQQSCHLKPCGAMWYHTDWSAC
SKTCEGGFRVREVRCLSDDMLSSEGCKEELKPVEREECNPEPCIPHIDENCRDKYFNCNV
VVQARLCVYDYYKTTCCASCTRVAHRQSQHRALS
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgctatcaggtctggctcttctgctgcttgtctgcctcctccacatgtttgtgactgcg
caggggaacccgtggtcacagagtctgggctgcgatgagtacctgggctcaggcaaggtg
atggacaagtgtggggtgtgtggcggggacaacacggcctgtaagctggtgtcagggctc
ttccagcagcacagcctgaacaaggtgggctaccacaagatagtggagatcccagaggga
gccaccaagatcaacgtcaccgagacggtgaagagcaggaattacctggctctgaaaagc
cgctcaggtcgctccatcatcaatgggaactgggccattgaccggccagggaagtatgag
ggggtgggcaccatgttcacctaccgacgacccaatgaggtcaccagcaccgccggggag
tccttcctggctgaagggccaaccaatgagatcctggatgtttatgtgatctaccagcag
cccaacccaggagtgagctatgaattcatccttccctctgacaaccctccacagcacccc
gaccacagacctggagggaatactctgcatgggcaaagtgggaatgaccaccggggcaac
cccaaccaggagggctacgatctagcaggagagggcaaataccctccccaggtacccaac
aaccaggtgccagcggtccagccacccaaacgtcagagagaatataactggaaactgtct
ggggcaacagagtgtagcgcctcctgtggcagaggtagcaggtacaccatcttccactgt
gtccacagactgagccatgagcatgtaccagagaaccagtgtgacagcagcaccaggccc
agttcacaggaggagccctgcaaccttcagtcctgccctgccttctgggacattggtgag
tggtcggagtgcagtaagacatgtggcctgggtatgcagcaccgccaggtcttgtgcagg
caggtgtatgccaaccggaccctcaacgtccacaccagccgctgccgccacctggagcag
cctgagaccaccagcacctgccagctgaaaatctgcagcgagtggcagatacgaaccgag
tggagcgcctgctctgttccctgtggcgtgggccagaggaccagggacgtgcactgtgtc
agcaacgtgggagactttgtgtcggacgaggagtgcaacatgaagctgcgacccagtgac
aatgagaactgtgacatggggccctgtgctaaaagttggttcttcactgagtgggggaat
aagtgttctgctgagtgtgggatgggcatccggatccgcggcgttctgtgcctgaccaat
cacatcagcagcttgcctctggaggggtgtggccatgagcgccccactgactctcaggtc
tgtaatcacggcccctgtgagagtcgcatcgagtggtttacagccccctggagtcagtgc
tcaacggagtgtggctcgggcagccagcagagggcagtggtgtgtctgatgaagtctgac
gaggggttcaatgtaatgccgccctacgaatgttcttctctagacaagcctcttaatcag
cagagctgccacctcaagccctgcggggccatgtggtaccacacagactggagcgcttgt
tctaagacgtgtgaggggggcttccgtgtgagggaggtgcgctgtctgtctgatgacatg
ctttccagtgagggctgtaaggaggagctgaaaccagtggagagagaggagtgcaaccca
gagccctgcatcccacacatagacgagaactgtcgagacaagtatttcaactgcaatgtg
gtggtccaggcacgtctctgtgtgtacgactactacaagacaacctgctgtgcctcctgc
acacgagtggcccacagacagtcacaacacagggcactcagctag
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