Salmo trutta (river trout): 115167072
Help
Entry
115167072 CDS
T08542
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin-like
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
stru
Salmo trutta (river trout)
Pathway
stru04120
Ubiquitin mediated proteolysis
stru04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
115167072
04120 Ubiquitin mediated proteolysis
115167072
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stru04121
]
115167072
Enzymes [BR:
stru01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115167072
Ubiquitin system [BR:
stru04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115167072
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-ANAPC11
zf-RING-like
FANCL_C
Motif
Other DBs
NCBI-GeneID:
115167072
NCBI-ProteinID:
XP_029576993
Ensembl:
ENSSTUG00000000325
LinkDB
All DBs
Position
3:complement(6146742..6156776)
Genome browser
AA seq
628 aa
AA seq
DB search
MVRAALVTATSLALTGAVIAHAYFLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKF
MRKIFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFIKCFHWLA
EDRVDFMERSPNISWVFHFRVFSLMVLLGILDFLFVNHACHSIITRGASVQLVFGFEYAI
LMTMVLTTFIKYTLHTVHLQSDNPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEDLLASDNVCIICREEMVT
GAKKLPCNHIFHSSCLRSWFQRQQTCPTCRMDVLRASNPNQPPAPAPAQPPAPAAPANAP
VPGPPGNVGPGMMPHFPPGLFPFWGPFPGAAPPAGAPGAPGATDAPGATEAAQTQGAGTG
QSTGASTVGAAPAPGGPIPGFPFPSFPPPPFPSAPWLTMPPPPPFVSSMPPPPPALSTMS
EAELSELEQEGRRGLEARLRCLHNIHTLLDAAMLNIHHYLTTVATLTPPQSETSSAAGEA
SGSSPPSTSAETQENQENDSPSSTAAELEAVNGASGFSQPDSTTLGDREDKRDEEDGEEV
GEDGEPNPSELRRRRLRKLETTPPPPDH
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgtgcagccctggtgactgccaccagtctggctctgactggcgctgtgattgcc
catgcctactttctcaaacaccagttctaccccactgtggtctacctcaccaagagtagc
cccagtatggcagtgttgtacatccaggcgtttgtgttggtgttcctgttgggaaagttc
atgcgtaaaatcttcttcggacagctgagagctgcagagatggagcatctgatagagcga
tcctggtatgctgtcacagagacgtgtctggcctttacggtgttcagggatgacttctct
ccccgcttcgttgccctattcaccctgctgctcttcatcaagtgcttccactggctggct
gaggacagggttgactttatggagagaagtcctaatatatcctgggtcttccacttcagg
gtgttctctctgatggtgttgctaggaatcctggacttcctgtttgtcaaccatgcctgt
cacagtatcatcacacgaggtgcctctgtccaattagtctttggatttgagtatgccatc
ctgatgacaatggtgctcaccaccttcatcaagtacaccctccacactgttcacctccag
agtgacaacccctgggacaacaaagcagtctacatgctctacaccgagctcttcactggt
ttcatcaaggtcctcctgtacatggcgttcatgaccatcatgataaaggttcacaccttc
cccctgtttgccatccggcccatgtacctggctatgaggcagttcaagaaagcagtaacc
gatgcaataatgtcgcggcgagccatccgcaacatgaatacactttacccagatgccact
cctgaagatctgctggcttcagacaacgtgtgtatcatctgtcgtgaagaaatggtgact
ggagccaagaaacttccttgcaaccatatcttccactctagttgccttcgctcctggttc
cagagacagcagacgtgtcctacatgtcgtatggatgtcctccgggcctcgaaccccaac
cagcctcccgccccagcccctgcccagccccctgccccagcagcacccgccaacgcccct
gtccctggtccacctgggaatgttggccctggaatgatgccccacttccccccagggctg
tttcctttctggggccccttccctggagcggccccccctgctggtgctcctggcgcccca
ggggccacagacgcccctggggctacagaggcagctcagactcagggcgctggcaccggt
cagtccactggggccagtacagtcggtgctgctcctgctccaggaggccctattcctggg
ttccccttcccctccttcccacccccaccgttcccctcagctccatggctgactatgcca
ccacctccaccgtttgtgtcatccatgccccctcctcccccggccctgtccaccatgtca
gaggctgagctgagcgagctggagcaggagggccgtagaggcctggaggccagactgcgt
tgtctccacaacatccacactctactggacgctgccatgctcaacatccaccactacctc
actaccgtcgccacgcttactcctcctcagtcagaaaccagcagcgctgctggcgaggcc
agtggatcatctcctccctccactagtgcagaaacccaggagaaccaggagaacgactct
ccgagcagtacagccgctgaacttgaagctgtgaatggggcctcaggtttctcccagcca
gactctaccacgctgggcgacagggaagacaagcgggatgaagaggatggagaggaagtc
ggcgaagacggagagcccaacccttcagagctgaggcgccgtcgtctccgcaaactcgag
accacaccccctcctcctgaccactga
DBGET
integrated database retrieval system
