Salmo trutta (river trout): 115167215 Help Entry 115167215         CDS       T08542                                  Name (RefSeq) THO complex subunit 3   KO K12880   THO complex subunit 3 Organism stru  Salmo trutta (river trout) Pathway stru03013   Nucleocytoplasmic transport stru03040   Spliceosome Brite KEGG Orthology (KO) [BR:stru00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     115167215   09122 Translation    03013 Nucleocytoplasmic transport     115167215  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:stru03019]     115167215    03041 Spliceosome [BR:stru03041]     115167215 Messenger RNA biogenesis [BR:stru03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     TREX complex      115167215 Spliceosome [BR:stru03041]  Complex C   Other components    EJC/TREX     115167215  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     115167215 SSDB OrthologParalogGFIT Motif Pfam:  Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40_CDC20-Fz WD40 Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_EML_2 WD40_WDHD1_1st WDR55 ANAPC4_WD40 Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_Aladin WD40_Gbeta Beta-prop_WDR3_2nd Beta-prop_WDR19_1st Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_Vps41 WD40_MABP1-WDR62_2nd Beta-prop_IFT140_1st Beta-prop_EML DSE1_N Beta-prop_WDR36-Utp21_1st Beta-prop_WDR35_TULP_N RMC1_N eIF2A WD40_RFWD3 Beta-prop_NOL10_N Beta-prop_TEP1_C Beta-prop_HPS5 NBCH_WD40 Tricorn_2nd PD40 WD40_MABP1-WDR62_1st WDR90_beta-prop_4th TRM82_WD Beta-prop_SPT8 Beta-prop_ACSF4 ASA1 B-prop_COPA_B_2nd Beta-prop_EIPR1 Beta-prop_NUP159_NUP214 Beta-prop_WDR75_1st PAC11 Peptidase_S9_N DPPIV_N Beta-prop_Nup120_160 Beta-prop_NWD2_C Beta-prop_ELP1_1st Cytochrom_D1 WD_LRWD1 Beta-prop_WDR11_1st YNCE Motif Other DBs NCBI-GeneID:  115167215 NCBI-ProteinID:  XP_029577262 LinkDB All DBs Position 3:6445236..6449007 Genome browser AA seq 322 aa AA seqDB search MASRYYQEMQESFRNNNKSREFPAHTAKVHSVAWSCDGRRLASGSFDKTASVFVLEKDRL VKENNYRGHGDSVDQLCWHPTNPDVFVTASGDKTIRIWDVRTTKCTATVNTKGENINICW SPDGQTIAVGNKDDVVTFIDVKSHRSRAEEQFKFEVNEISWNNDNNMFFLTNGNGCINIL SYPELKPIQSINAHPSNCICIKFDPTGKYFATGSADALVSLWTVEELVCVRCFSRLDWPV RTLSFSHDGKMLASASEDHFIDIAEVETGEKLWEVQCESPTFTVAWHPKRPLLAYACDDK EGKYDNNREAGTVKLFGLPNDS NT seq 969 nt NT seq  +upstreamnt  +downstreamnt atggcgtccagatattatcaagagatgcaagagagtttcagaaataacaacaaaagcagg gaattccctgcgcataccgctaaagttcattcagtagcatggagttgcgacggcaggagg ttggcatctgggtcttttgataaaacagcaagcgtatttgtcttggaaaaagaccgtttg gtgaaagagaacaactacagaggccatggagacagtgttgatcagttgtgttggcatcct accaacccagacgtgtttgtcactgcatcaggggacaagaccatacgcatctgggacgtc agaacaacaaagtgcacggctactgtcaacactaaaggggaaaacatcaatatctgctgg agtcctgacggccaaacgatagcagttgggaacaaggatgatgtggttaccttcatcgac gtcaaatcacaccggtcacgggctgaggagcagtttaagtttgaagtcaacgagatctca tggaataatgacaacaacatgttctttctcaccaatggaaacgggtgcatcaacatcttg agttaccctgagctgaagcccatccagtcgatcaacgcccatccctccaactgcatctgc atcaagtttgaccccacggggaagtactttgccacaggaagtgcagatgctctggtcagt ctgtggaccgttgaagaactggtctgtgttcgttgtttttccaggttggactggccagtg aggacattgagtttcagccatgatgggaagatgctggcttcagcctcagaggaccacttc atagacatagcagaggttgaaacaggagagaagctgtgggaggtccagtgtgagtctcct acattcacagtagcctggcatcctaagagaccgctgctggcctacgcatgtgatgacaag gaagggaagtacgacaacaatagagaggcaggcactgtcaaactgtttggattacctaat gattcctga

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