Salmo trutta (river trout): 115167230
Help
Entry
115167230 CDS
T08542
Name
(RefSeq) DNA-binding protein RFX7-like isoform X1
KO
K09175
DNA-binding protein RFX7
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115167230
Transcription factors [BR:
stru03000
]
Eukaryotic type
Other basic domains
RF-X
115167230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFX_DNA_binding
RFX5_N
Pox_D5
Motif
Other DBs
NCBI-GeneID:
115167230
NCBI-ProteinID:
XP_029577285
Ensembl:
ENSSTUG00000038613
LinkDB
All DBs
Position
29:complement(25523136..25588012)
Genome browser
AA seq
1465 aa
AA seq
DB search
MTEDQQQHDQLPKLGSGISTLPSLVPGLQGTEASALQLKIKNSICKSVQTKVDNILQDVE
MFTDIEKLYLYLKLPSGPSNSEKRTERGSASPGELSCSDQSSMSSSRTQQMHAFNWIRNH
LEEHPETSLPKQEVYDEYKSYCDNLCYHPLSAADFGKIMKNVFPNMKARRLGMRGKSKYC
YSGLRKKAFVHMPSLPNLELHKTGDGCEVLEASGQLCSAEEEVRSAACGLVCEWAQKVLS
RQFDAVEDLARFLLNSHYIGTKSVAALTVMTGTPTGDNTVHSQRVKTPLPSSAFVPTAEA
HFFQSQVKTLPSPSIDAKQQLQRKIQKKQQEQMLHSPLPGEAQARRADGGTPGVGSITCR
SPALLSPHPTIGIMVAAVPSPITVQRSRQLMSPSPVGTSEGKILPVNFQVVTQSMQPVKC
PKTPQNIPASPVGDRSARHRYAQILPKPSATSAITLCSPPTLLITNSPIKTVMQPTPHIS
SVNVVKMTTISLAPNCSTTTTLTNTTLRPASAGMGSTVALEESRPSPRARSGSAAPILSP
LARSGRATTTPTIDIKMMEGEAISEGSPALGASRLTMTQEAAGGQRAGGAVPRAASVPTP
HTKGSLGLEAMAGTKCNVKSSLSNNPVAATAGSNNNTNNESTLYLTVSNQNTSNTLSPNG
GTVATSLIASKSPRKRPGVGPESYPTPVKRVFISQQPLGGSDGYRHGIGAGVKKLPRAGT
PVRPESAPAIGKVTVKLNSTVPTRILSLSDSPIETRGFQTVVKPQNSVQRRDTPTTMDTS
SIGNVSAPAGHARIQHQQHMTGNMQSMPNSSALLEQSAVSDLRNTMWVGGQLEGGKQQQQ
QAYAQQITDHKQVSTPVMEPLAMMGQAPASSQLSMQTDMDYFHFNDDDMTQDSIVEELVQ
MEEQMKLNGSLQAFGADVTVQGHQSVMQGNMMSSNQTVTPYYQSVHSSTTPIHTPTPTPT
STSEMMGGGQGLTRESPCSRMAPTTPVDSALGSSRHTPIGTPHSNCSGSVPPSPVECRNP
FAFTPINSSITGYHDGSIVSSSPVKPMQRPMATHPDKAKLEWMNNGYNNSGGNSINGISI
LPSYQDLVDDHFRKPHAFAIPGQSYQSQTRHYGRLTPISPVQQQAASMANLNKQEGFAVP
APLDNKATSTSSASGTFRCRSVSPAVRQRNLSGNQGLQNIPRTVVSPFTSPVTPEMINIF
ANSHGDVSVSSMAQRSQSVPVNVMMQTEVLPMQGQTNSKKITNVLLSKMDGDSDDAVRGL
GINNLPSNYTARMNLTQILETTPSFPSSANHQTLTSNAQNAYEFQKPGYLMKNSRNEQMS
LSAGDSQAQSATGEEQHQQSQPMLLAQKLHQQQQQQLDFSTTVKDLLADGSHTPGNRLVR
QVSELNAVGSDFRLTSDLSSSINDLNNLDTNLLFDPNQQQGQYDDSTLEELKNDPLFQQI
CSETANSNGFDWLESKDQPTVGLMG
NT seq
4398 nt
NT seq
+upstream
nt +downstream
nt
atgactgaggatcaacaacaacatgatcagctcccgaagctgggctctggaataagcacc
ttaccatccctagttcctggactgcaagggactgaggccagtgcgttgcagctcaaaata
aagaattccatctgtaaatctgtacagacaaaggtggacaatattttgcaagatgtggag
atgtttacagacatcgagaaactctacctctaccttaagttgccttctggtcccagcaac
agtgaaaaaaggactgagagagggtctgccagtcctggagaactgtcatgcagtgatcag
agctcgatgtcatcaagccgcactcagcagatgcacgcgttcaactggatccgcaatcac
ctagaggaacacccagaaacctctctgcccaaacaggaggtctatgacgagtacaagagc
tattgtgacaatctctgctaccacccactgagtgctgcggactttggaaagataatgaaa
aatgtatttccaaacatgaaggcacgtcgacttggcatgagaggcaaatcaaaatactgc
tatagtggactgaggaagaaagcctttgtccacatgccatctttacccaacctggagtta
cataaaacaggggacgggtgtgaggtgctggaggcctcaggtcagctgtgcagtgcggag
gaagaggtgcgctctgcggcctgtggcctggtgtgtgagtgggcccagaaggtgctgagc
cgccagtttgatgctgtggaggacctggctcgcttcctcctcaacagccactacatcggc
accaaatctgtggcagccctcacggtcatgactggtacaccaacaggtgacaatacagtg
cattcgcaaagagttaaaacgccactcccatcctcagcatttgtacccacagctgaagcc
cacttcttccagtcccaagtgaagaccctgccctctccctccatcgatgccaagcagcag
ctccagcggaagatccagaagaagcagcaggagcagatgctgcactcccccctccccgga
gaggctcaggccaggcgggctgatgggggcacgcctggtgtcggctccattacctgtaga
agcccagccctgctctccccacatcccaccattggcattatggtagctgcagtccccagc
cccatcacggtacaaaggagcaggcagctgatgtcccccagtcctgtgggaacatcggag
ggcaagattttgcctgtcaacttccaagtggtgacccagtcaatgcagcctgtcaagtgt
cccaagacccctcagaatatcccagccagccctgtgggggaccgctctgcccggcaccgg
tatgcccagatcctgcctaaaccctcagccaccagcgccatcaccctgtgctcgcccccc
accctgctcatcaccaacagccccatcaagaccgtgatgcagcccacaccccacatcagc
tctgtcaacgtggtcaagatgaccaccatatccctggctcccaactgcagcactacaacc
accctaaccaacaccaccttaaggcctgcctctgctggcatgggcagcactgtagccctg
gaggagagcagacccagcccacgggccaggagtggctctgcagcccctatcctgtccccc
ttagccaggtcaggccgggccaccaccaccccgaccatcgacatcaagatgatggagggt
gaagccataagtgagggcagtccggccctgggtgctagcaggcttactatgactcaggaa
gctgcagggggccagagggctggaggagctgtaccaagggctgccagtgtgcccacgcct
cacactaaaggctccctggggctggaggcaatggctggaaccaaatgcaacgtaaagtcc
tctttgagcaacaaccctgtggcagctacagctggtagcaataataacaccaataacgaa
agcactttgtatttgacggtctccaatcagaataccagcaacactctgtcacccaatggc
ggcactgttgccacatcactcatcgcctctaagagccccaggaagcgcccaggcgtcggc
ccagagtcttatcccacgcctgtcaaaagggtcttcatctcccagcagcctcttgggggt
tccgatggttacagacatgggattggtgcaggagtgaagaaactccccagggcaggaacc
ccggtcagacctgaaagtgcaccagccatcggtaaagttactgtgaaactgaactccact
gtcccaactcgaatcctgtcactctctgattcccccatcgaaaccagaggcttccagact
gttgtcaagccacagaactccgtgcagagaagagacactccgaccaccatggacactagc
agcatcggcaacgttagtgccccggctggtcatgcacgaattcagcaccagcagcacatg
acgggtaacatgcaatccatgcccaacagctctgccctactggagcagtctgctgtgagt
gacctaaggaacaccatgtgggttgggggccagctggagggaggtaagcaacagcagcag
caggcctacgcccagcagatcacagaccacaagcaggtatccacaccggtcatggagccc
ctggccatgatgggccaggccccagcctctagccagctctccatgcagacagacatggac
tacttccattttaatgatgacgatatgacccaggacagcattgtggaggagctggtgcag
atggaggagcagatgaagctcaacggcagtctgcaggccttcggagctgatgtgacagtg
caaggccatcagtctgtaatgcagggcaacatgatgtcctccaaccagacagtgacccct
tactaccaatcagtacacagcagcaccacccctatccacacccctaccccaactcccaca
tccacctctgagatgatgggaggaggccagggcttgaccagggagagtccctgctcccgc
atggcccctaccaccccagtggacagtgccctggggagcagccgacacacccccatcggc
actccacactccaactgcagcggcagcgtgccccccagccctgtggagtgcaggaatccc
tttgccttcactcccattaactccagcattacaggctaccacgacggcagcattgtctcc
agcagccccgtcaagcccatgcagaggcccatggctactcacccagacaaggccaaactg
gagtggatgaacaatggttacaacaacagcggggggaactccatcaacggcataagtatc
ctccccagctatcaggacctggttgacgaccacttccgaaagccccatgccttcgccatc
cctggccagtcctatcagtctcagacgaggcactacggccgcctaacacccatctctccg
gtgcagcagcaggcagccagtatggccaacctgaacaagcaggagggcttcgctgtgccc
gcccctctggacaacaaggccaccagcacatcctcagcaagcgggactttccgctgtcgt
agtgtgagccctgccgtgcgacagcgaaacctgagtggcaaccagggcctgcagaacatc
ccccgaacagtggtgtcccccttcacctcccccgtgacccccgagatgatcaacatcttc
gccaacagccatggggatgtcagcgtcagcagcatggcacagaggagccagtctgtgcct
gtcaacgtgatgatgcagacggaggtgctgcccatgcagggccagaccaacagcaaaaag
atcaccaacgtgctcctgagcaagatggacggggacagtgacgacgcggtgcggggcctg
ggcatcaacaacctgccgtccaactacacagcccgcatgaacctcacccagatcttagag
accacgcccagcttccccagcagtgccaaccaccagactctgacttccaacgctcagaat
gcgtacgagtttcagaagcctggttacctcatgaagaactctaggaacgaacagatgagt
ctctcagcaggtgacagccaagcacaatcagctactggagaagagcagcatcagcagagc
cagcctatgctgctggcccaaaaacttcaccaacaacagcagcagcagctagatttcagc
accaccgttaaagacctcttagcggacggcagccatactcctggcaatcggctcgtgaga
caggtgtcagaactcaacgctgtggggtctgattttcgactgacctctgatctttccagt
agcatcaatgacctgaacaatttggacacaaaccttctgtttgaccccaatcaacagcaa
ggacaatatgacgactctacactggaggaactgaagaatgatccactgttccagcagatt
tgcagcgagactgcgaattccaatggatttgattggctggaaagtaaagaccagcccaca
gtcgggttaatgggttaa
DBGET
integrated database retrieval system
