Salmo trutta (river trout): 115167234
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Entry
115167234 CDS
T08542
Name
(RefSeq) transcription factor 12-like isoform X1
KO
K15603
transcription factor 4/12
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115167234
Transcription factors [BR:
stru03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Ubiquitous (class A) factors
115167234
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
Motif
Other DBs
NCBI-GeneID:
115167234
NCBI-ProteinID:
XP_029577294
Ensembl:
ENSSTUG00000038698
LinkDB
All DBs
Position
29:25630146..25723530
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AA seq
732 aa
AA seq
DB search
MNPQQRIAAIGTDKELSDLLDFSAMFSPPVNSGKNRPTSLGSSQFSAPGMDERPSQAASS
WAPGGQSSSPSYESSRGLADSPHYGDHMSDSRLVSHEGLSQTPFMNSSIMGKSAERAQFP
AYGREPGVSGCQANLRPDIGLVSPGPVTTSGKTAPPFYPPFTGANPRRRPLPEPTPIDPL
QTKKVRKVPPGLPSSVYAPSPNTEDFNRDSPSYSSPKPPSSMFASTFFDGSHNSSDPWNS
SNGINQPSYGGMLGGSSSHMPQSGNYVNMHSHDRLNYPPHSVSPTDIHASLPPMSSFHRS
NASTSPFVNPTHTPPVNTTDGVMVAANRGNATGSQQTGDALGKALASIYSPDHTSSSFPS
NPSTPVGSPSPLTGTAGAAASAGTVVTTSAPSGRAGTNQWSRGAAGQSPSSPNYENSLHS
LKTRVHQQLHEHLQDAMSFLKDVCESRMEDRLDRLDDAILVLRNHAVGSTTSLPSDIHSL
LGQNGPIATLGANFPAAGLVASRTAAMGGSHRDEAGSLINSHGGPPSVGSMSNMSSMSTA
ELNHQVETFRGLAAGLAGQVAAALELKVENQDRDDMHDGHSSDDLGSGDESDKRDIKTPR
GGTRTSSINEDDDNLNPEQKAERERERRMANNARERLRVRDINEAFKELGRMVQLHLKSE
KPQTKLLILHQAVAVILSLEQQVRERNLNPKAACLKRREEEKVSGHGISGDQQAHHGVHP
GLTDTSNSMGRL
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgaatcctcaacagcggattgccgcaatcggcacagacaaggaattgagtgacttgctg
gattttagcgcgatgttttctccacctgtaaatagtgggaaaaaccgaccaacctccctt
ggaagcagccagttcagtgcaccaggtatggatgagaggccgagccaggcagcgtcctcc
tgggccccaggtggccagtcgtccagtccctcttacgagtcctccaggggtttggcagac
agccctcattatggtgatcacatgagtgacagtcgattagtgtcccatgaaggattgtcc
cagacaccttttatgaactccagcataatgggtaaatcagcagagagggctcaatttcca
gcctatgggagagagcctggcgtgtctggctgccaggccaatctgcggccggacattggt
ctggtaagtcctgggcctgtgaccacatcagggaaaacggcccctcccttctaccctccc
ttcaccggggccaaccccagaagacgccccctaccggaacctactcccattgatcctcta
caaacaaagaaagttcgcaaggtccctcctggtctgccttcatctgtgtatgccccgtct
cccaacacagaagacttcaacagagattctccctcctactcatctcccaaaccccccagc
agtatgtttgcaagcactttctttgatgggtcccacaactcttctgatccgtggaattcc
tccaatgggatcaaccagcctagttatggaggaatgctgggaggatcttcatctcacatg
ccgcagtcaggaaattacgtcaacatgcactcacatgaccgcctgaattaccctccacac
tctgtgtcgccgacagacatccatgccagtcttcctccaatgtccagcttccaccgcagc
aacgccagcacttcaccattcgttaacccaacacacaccccgcctgtcaacaccaccgac
ggggtcatggttgctgcaaatcgggggaacgccactggaagccagcagactggagatgca
cttggcaaagcattggcttcgatttactcacctgaccacaccagcagtagttttccatcc
aacccctccacccctgtaggatctccgtcacccctgactggcacagcaggtgctgccgcg
tcagcaggtacagtggtgaccaccagcgccccctctggaagggcaggtaccaaccaatgg
tcgcgtggtgcagccggacagagcccctcctcccccaactatgagaactccctgcactca
ctgaaaactcgagtccatcagcagcttcatgagcatctccaggatgccatgtcattctta
aaggatgtatgcgagtctcggatggaggatcgactggatagactggatgatgccatcctc
gtcctgcggaaccatgccgtgggctccaccaccagtctgcccagtgacatacacagcctg
ctgggacagaacgggccaattgcaaccctcggagcaaacttccctgccgccggattggtt
gctagtcggacagcagctatgggtggttctcaccgggatgaggctggcagtttgatcaac
agtcacggagggccgcccagcgtgggctccatgtccaacatgtccagcatgtccaccgct
gaactcaaccaccaagtggaaaccttcagaggtctggctgcaggtctggctggtcaggtg
gctgcagccctggagctgaaggtagagaaccaggacagagacgacatgcatgatggccac
tcctccgacgacctcggctccggagacgaaagcgacaagagagacatcaagactcccaga
ggaggcacacggacaagcagcatcaatgaggatgatgacaacctgaacccagagcagaag
gctgagcgggagcgcgagaggagaatggccaacaacgcccgcgaacgcctgagagtgcga
gacatcaacgaggctttcaaggagctgggccgcatggttcagctgcacctgaagagcgag
aagccccagaccaagctgctcatcctgcaccaggccgtggcggtcatactgagcctggag
caacaagtcagagagcggaatctgaaccccaaagcagcctgccttaagaggagggaagag
gagaaggtgtctggccatgggatctctggggaccagcaggcccaccatggggtccacccc
ggcctcaccgatacatccaactccatgggccgactctga
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