Salmo trutta (river trout): 115167297
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Entry
115167297 CDS
T08542
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stru03021
]
115167297
Transcription machinery [BR:
stru03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
115167297
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_19
TPR_14
TPR_16
TPR_CcmH_CycH
TPR_8
TPR_12
TPR_17
TPR_10
TPR_11
TPR_7
ARM_TT21_5th
TPR_6
TPR_Slam
ARM_TT21_4th
ANAPC3
TPR_EMC2
Motif
Other DBs
NCBI-GeneID:
115167297
NCBI-ProteinID:
XP_029577451
Ensembl:
ENSSTUG00000050904
UniProt:
A0A674F4S9
LinkDB
All DBs
Position
29:complement(28142562..28154463)
Genome browser
AA seq
1158 aa
AA seq
DB search
MSRGSIEIPLRDTDEVIELDFDQLPEGDEVISILKQEHTQLHIWIALALEYYKQTKTEDF
VKLLEAARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDAKKELITQATLLYTMA
DKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSTNNIPALLGKACISFNKKDYR
GALAYYKKALRTNPGCPAEVRLGMGHCFVKLSKLEKARLAFGRALELNSKCVGALVGLAV
LELNSKEPDSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNTE
VEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSTFVLPFFGLGQMYVYRRDKENA
AQCFEKVLKAYPNNYETMKILGSLYATSDDQEKRDIAKGHLKKVTEQYPDDVEAWIELAQ
ILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNLGALHFRLGNLGEAKKYFLASLER
AKAEGEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAM
ARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQND
TYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDSKNLYAANGIGAVLAHK
GYYREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCLKKFYKHQNTEVL
LYLARALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATLVLKDEKSNLKAVL
SAVKELELAHRYFSYLAKAGDKMRFDLVLASTEARQCSDLLSQAQYHVARARKQDEEEKE
IRAKQDQERDFLRQQMHKEQEEKRTKQEEDQKKLLEQRAMYVEKTKGLLSFADGMKEERK
EKKKGGGRRKKGGDFDEFVNDGSDEDLPVRRRKKRKGGSGSEEEGRKRRRRPNKGGDDGS
DDEEGGSRPKKQRRPRAGGKKIQRAEPVPPSLKGKIKSKAIISSSDSSSDEDGLKIAEDR
NPRDSGSGSDNEGSHKKRIASDSESDGGRNHSGSDAGSPQRSENSGSDSGSDRPVKRKRV
QKQSDSEQSDNESKRSRSGSENESRPGSPAAASGSEAGSPAGSPAGFPAGSPRRSDNGSE
PGGSANEASNHGSGSDSD
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atgtctcggggttcaattgaaatccccttaagggacaccgatgaggttattgagcttgat
ttcgaccagttgccagaaggagatgaggtcatcagtatcctgaaacaggagcatacacag
ttgcacatatggattgctcttgctctggagtattacaaacagacgaagacggaggacttt
gtcaagctgctggaggcggcccgtattgatgggaacctggactacagagaccatgagaag
gaccagatgacctgtctggacaccttggcagcctactatgtccagcaggcacgtaaagag
aagaacaaagatgccaagaaggagctcatcactcaggccaccctgctctacaccatggca
gacaagatcatcatgtacgaccagaaccacttgttgggaagagcctgtttctgcctgctg
gagggggacaaaatggaccaggctgatgctcagttccactttgtcttgaaccagtctacc
aataacatccctgctctacttggtaaagcttgcatctccttcaataagaaggattacagg
ggagcactggcctactacaagaaggctctgcgcacaaaccctggatgtcctgccgaggtg
aggctggggatgggccactgctttgtcaagctcagtaagctggagaaggcccgcctggcc
tttggccgggccctggagctcaactccaagtgtgtgggagcccttgtgggcttggctgtg
ctggagctcaacagcaaggagcccgactccatcaagaatggggtgcagctcctatccaga
gcctacaccatcgaccccagcaaccccatggtgctcaaccacctggctaaccacttcttc
ttcaaaaaggactacagtaaagtgcagcacctggctctccatgcctttcacaacacagag
gtggaagcgatgcaggctgagagctgctaccagttggcccgctcctttcatgtacaggag
gactatgaccaggccttccagtactactaccaggccacccagtttgcctcatctaccttt
gtgctgcctttctttggcctggggcagatgtacgtgtaccgtagagacaaggagaatgca
gcccagtgctttgagaaggtcctaaaggcctaccccaacaactatgaaaccatgaagatc
ctgggctctctttatgctacttcagatgatcaggaaaagagagacattgccaaaggtcat
ctgaagaaggtgaccgagcagtaccctgatgacgtggaggcctggattgagctggcccag
atcctggagcagaccgacatccagggcgccctctctgcctatggcacggccacccgcatt
ctgcaggagaaggtccaagctgacgtcccccctgagatcctcaacaacctgggggctctc
cacttcagactggggaacctgggagaggccaagaaatacttcctggcttctttggagcgg
gccaaagctgagggcgagcatgacgagcattactacaacgccatctctgtcaccacctct
tacaacctagccaggctctacgaggccatgtgtgaattccacgaggcggagaaactctac
aagaacatcctgagggaacatcccaactacgtcgactgttacctgcgtcttggagcaatg
gctcgtgacaaaggaaacttctatgaagcttccgactggttcaaagaggctctgcagatt
aatcaggatcacccagacgcctggtccctgatcgggaatctccacttggccaagcaggag
tggggtccgggtcagaagaagtttgagcgtatcctcaagcagccgtccactcagaacgac
acctactccatgctggccctgggcaacgtgtggctccagaccctgcaccagcccaccagg
gaccgggagaaggaaaagagacatcaggatcgagccctggccatttacaaacaggtccta
cgaaacgactccaagaacctttacgctgccaatggcataggtgccgtcctggcccataaa
ggctactatcgagaggcccgtgacgtgtttgcccaggtgagagaggccaccgctgatatc
agcgacgtctggctcaacctggcccacatctacgtggagcagaaacagtacatcagcgct
gtgcagatgtacgagaactgtctgaagaaattctacaagcatcagaacactgaggtgctg
ctgtacctggctcgggcactcttcaaatgcgggaaactccaggagtgcaaacagactctg
ctgaaggcgcgtcacgtggcccccagtgacacggtgctgatgttcaacgtggccctggtg
ctgcagaggctggccactctggtgctgaaggacgagaagagtaacctaaaggctgtactc
agtgctgtcaaagagctggagctggcccaccggtatttcagctaccttgccaaggcaggt
gacaagatgaggttcgacctagtgcttgcctccactgaggccaggcaatgctctgacctg
ctgagtcaggcccagtaccacgtggctcgggccaggaagcaggacgaggaggagaaggag
atccgggccaagcaggatcaggagagggacttcttgcgccaacagatgcataaagaacag
gaggagaagagaaccaagcaggaagaggatcagaagaagctgctggagcagagagccatg
tatgtggagaagaccaagggtctgctctccttcgccgatggaatgaaggaggaaaggaaa
gagaagaagaaaggtggtggccgacgcaagaaagggggtgactttgatgagtttgtcaac
gatggctctgatgaggacctgccagtgagaaggaggaagaagaggaagggtggcagcggg
agtgaagaggagggccgcaagaggaggaggagacccaacaaagggggtgacgatggcagt
gatgacgaggaaggaggctcacggcccaaaaagcaacgcagacccagagcgggcggcaag
aagatccaaagggccgagcctgtgccaccgtctctcaaaggcaagatcaagtcgaaggcc
atcatctcatcctccgactcttcatcagacgaggatgggctgaaaattgctgaagaccga
aaccccagagacagtggttcaggttctgataatgagggcagccacaagaagcgcatcgcc
tccgacagtgagtccgacgggggccggaaccactctggcagcgacgctggaagcccccaa
cgctccgaaaactcaggtagcgactcaggcagcgaccgtccagtgaagaggaagagggtg
cagaagcagtctgactcagagcagtcggataacgagagcaagaggagccgctctgggtcg
gagaacgagtcccggccaggctcaccggcagcagcctctggctctgaagcaggttctccg
gcaggttctccggcgggcttcccggcaggctccccacgccgctccgacaacggatcagaa
ccagggggctctgccaacgaggcctccaaccatggctctggctctgacagtgactga
DBGET
integrated database retrieval system
