Salmo trutta (river trout): 115167518
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Entry
115167518 CDS
T08542
Name
(RefSeq) autophagy-related protein 13-like isoform X1
KO
K08331
autophagy-related protein 13
Organism
stru
Salmo trutta (river trout)
Pathway
stru04136
Autophagy - other
stru04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
115167518
04136 Autophagy - other
115167518
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115167518
03029 Mitochondrial biogenesis [BR:
stru03029
]
115167518
Membrane trafficking [BR:
stru04131
]
Autophagy
Autophagosome formation proteins
ULK complex
115167518
Atg1 complex
115167518
Mitochondrial biogenesis [BR:
stru03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
115167518
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
115167518
NCBI-ProteinID:
XP_029577842
Ensembl:
ENSSTUG00000008494
LinkDB
All DBs
Position
29:complement(36145236..36155219)
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AA seq
549 aa
AA seq
DB search
MMDSDLSPQDRKDLDKFIKFFALKTVQVIVQARLGEKVCTRSLSSPTGSDWFNLAIKDIP
EVTHEAKKALSGQLPGIGRSMCVEISLKTSEGDSMELETWCLEMNEKCDKDIKVSYTVYN
RLSLLLKSLLAITRVTPAYKLSRKQGHDYVILYRIYFGEVQLTGLGEGFQTVRVGVVGTP
IGTITLSCAYRTNLAFMSTRQFERTAPIMGIIIDHFVERPFGNIGHMRPCNYRAPGEDEG
AYNGVEDSQEVCTTSFSTSPPSQCVFTVSKAHLKTPKPAVMDTLKVPMMGLAFSQQLYCS
RLSYQPPVLVGAADFCHPSTLNAANLHQVTTQMGIPGKEGGVPQQVPVQPYHGAQAEHGR
VSSCPPADHVLATPSSSGEDAETSSRSIEVKSVSPCDVLETTFTRKVGAFVNKPGTQVTT
ASLDLPFAAFAPRAYDLEENDPMVQPPESPATSSPLQGSLHSQGSGESGGPAQDDFVMVD
FKPAFSKDDLLPMDLGTFYREFQNPPQLASLTIDVSSQSMAEDLDSLPEKLAVYEKNIDE
FDAFVDTLQ
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgatggacagtgatctaagtcctcaggatagaaaagacttggacaagttcataaagttt
tttgctttgaagacagtgcaagtgatagtccaagcacgacttggggaaaaagtatgcaca
cgctccttgtcttcacctactggctctgattggttcaatctggcaatcaaagatatccca
gaagttacacatgaggcaaagaaagctctgtccgggcagcttcctggcatcggacgatcc
atgtgtgttgagatctccctcaaaacctcagagggagactcaatggaattggagacatgg
tgtctcgaaatgaacgagaaatgtgacaaagatattaaggtgtcctacaccgtctataac
cgcctgtcgttactgctcaagtcactgctggccattacaagggtaaccccagcctacaaa
ctctcacgaaagcaaggccatgactatgtcatcctgtacaggatatattttggagaggtt
caactcacaggattgggagaagggttccagacagtgcgtgtaggagttgtgggaactccc
attggaacaatcaccttgtcttgtgcttacaggacaaacctggccttcatgtccaccagg
cagtttgagaggacggctccgattatgggcataattattgaccacttcgttgagcgcccc
tttggcaacataggacacatgcgtccatgtaactacagagcacccggggaagatgaagga
gcatacaatggggtggaggattctcaggaagtgtgcaccacgtccttctccacttctcca
ccctcacaatgtgtgttcactgtaagtaaggcacatttaaagacccctaaacctgcagtg
atggacactctgaaagtccccatgatgggcctggccttctcacagcaactctactgctct
cgtctttcttatcagcctcctgttcttgttggagctgctgacttctgccacccctccacc
ttaaatgctgccaacctacaccaggtaaccacccagatgggaattccagggaaggagggg
ggcgtaccccagcaggtgcctgtgcagccttatcatggtgcccaggcagagcatggacga
gtgtcctcatgcccccctgctgatcatgttctcgccacgccctccagcagtggtgaggat
gcagagacctcgtcgaggagcattgaggtgaagagtgtctctccctgtgatgtactggag
accaccttcaccaggaaagtgggtgcctttgtcaacaagccaggcacacaggtaaccaca
gcaagcctggacttaccatttgcagcgtttgctcccagagcctatgacctcgaggaaaat
gaccctatggttcagccgccggagtccccagccacgtcctctcccctgcagggcagttta
cactcccagggctctggtgagagtggtggcccggcacaggacgactttgttatggtggac
tttaagcctgccttctctaaggatgacctccttcccatggaccttggcacattctacaga
gagttccagaaccccccacagctcgccagcctcactattgatgtcagttctcagtccatg
gcagaagacctggactctcttcccgaaaaactggcagtatacgagaagaacattgatgaa
tttgatgcatttgtggacacattgcagtag
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integrated database retrieval system
