Salmo trutta (river trout): 115167630
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Entry
115167630 CDS
T08542
Name
(RefSeq) homer protein homolog 1-like isoform X1
KO
K15010
homer
Organism
stru
Salmo trutta (river trout)
Pathway
stru04068
FoxO signaling pathway
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
115167630
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
stru03037
]
115167630
Cilium and associated proteins [BR:
stru03037
]
Other cilia and associated proteins
Stereociliary proteins
115167630
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WH1
DASH_Duo1
Rod_CreS
DUF6909
LEKR1
CCDC172
GAS
SPC25_N
CCDC39
T4SS_LegC2C7
DUF2730
BLOC1_2
CCDC170_2nd
DUF1664
CCDC192
ODF2_C
EVH1_PP4R3
DAHL
Prominin
TP_0481_C
Motif
Other DBs
NCBI-GeneID:
115167630
NCBI-ProteinID:
XP_029578086
Ensembl:
ENSSTUG00000019033
LinkDB
All DBs
Position
29:complement(41897987..42043462)
Genome browser
AA seq
406 aa
AA seq
DB search
MEGGGELVIRLPGRSHSPDNNGNSNFGLGEFGQTMVLRHKEVHHFFLAPFREQPIYSTRA
HAFQIDPNTKKNWVPTSKHAVTVSYFYDSTRNVYRIISLDGTKAIINSTISPNMTFTKTS
QKFGQWADSRANTVYGLGFSTEHHLTKFAEKFAEYKEAARQAKGKSQDGKMELATSPSQE
SPAGELSSPLTPVTPPAMDNINGTDDPCDTTPEPRPEPSQNALAFTHSPSINKHWEAELS
ALKGNNAKLTAALLESTANVKQWKQQLAAYQEEAERLHKRVTELECQSTQTPVIKSQKTE
LNQTIEELESTLKDKEEEMERLKEEVENANELLEQRHSLTQKLQETELHGRVLEEQLLGA
EQRLEESQEEQENFRKSLRTLLEMLDGKIFELTELRDSLAKLIEGS
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggaaggcggtggcgagttggtgattcggttaccggggcgatcccattccccggacaac
aacggcaacagtaactttgggttaggcgagtttggccagacaatggtgttaaggcacaaa
gaggttcaccacttcttcttggcccccttcagggagcagccgatctacagcacgcgggcc
catgcgttccagattgaccccaataccaagaagaactgggtgcccaccagtaaacatgct
gtcaccgtgtcctacttctatgacagcacccgcaacgtttaccgcatcatcagcctcgac
ggcaccaaggcaataatcaacagcaccatcagccccaacatgaccttcaccaagacgtct
cagaagtttggccagtgggccgacagcagagctaacaccgtttatggcttgggcttctct
actgaacaccacctgaccaagtttgcagagaagtttgcagagtataaggaggcagctcgt
caggccaagggtaaaagtcaagatggaaagatggaactagcgacctctccctctcaggag
tcgccagcaggtgaactctcttcacctctgactcctgtgactcctcccgccatggacaac
atcaatgggacagatgacccctgtgacaccacacccgagccccgtcctgaaccgtctcag
aacgcactggccttcacacacagcccctccatcaataagcactgggaggcagagctatca
gctctaaaggggaacaatgctaagctaacagccgctctgctggagtccacagctaacgtc
aaacagtggaaacaacaactggctgcctaccaggaggaggccgagagactacacaaacgg
gtgactgagctagagtgccagagcacccagacccctgtgatcaaatcccagaagacggag
ctaaaccagaccattgaggaactggaaagcactctgaaggataaagaagaggaaatggag
cggttgaaagaggaagtggagaatgctaacgagctgctagagcagagacactccttgaca
cagaaactacaggagacggagttgcatgggcgagtgttagaggagcagctcttgggagct
gagcagcgattggaagaaagtcaggaagagcaggagaacttcaggaagagcctaaggacc
ctactggagatgctggatgggaagatatttgagctgacagagctcagggacagcttggcc
aagctcatagagggcagctag
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