Salmo trutta (river trout): 115167678
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Entry
115167678 CDS
T08542
Symbol
ddx31
Name
(RefSeq) probable ATP-dependent RNA helicase DDX31 isoform X1
KO
K14806
ATP-dependent RNA helicase DDX31/DBP7 [EC:
5.6.2.7
]
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
stru01009
]
115167678 (ddx31)
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
stru03009
]
115167678 (ddx31)
Enzymes [BR:
stru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
115167678 (ddx31)
Protein phosphatases and associated proteins [BR:
stru01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
115167678 (ddx31)
Ribosome biogenesis [BR:
stru03009
]
Eukaryotic type
Pre-60S particles
Helicases
115167678 (ddx31)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
ERCC3_RAD25_C
RanGAP1_C
Motif
Other DBs
NCBI-GeneID:
115167678
NCBI-ProteinID:
XP_029578175
Ensembl:
ENSSTUG00000038192
LinkDB
All DBs
Position
29:44297968..44365261
Genome browser
AA seq
765 aa
AA seq
DB search
MLDRKTTKTCFFILFIRDVYRIPPVTMAEDTLMLNLSSDSAPAFHSKSYQRPTSQEKWAL
KKAQKRKYSGIQKGLPNKQGFNGPKTKDQQPPEDKDEEDVPAHKSPVRKPAPKDAAKALS
SKTPKPAQRVKAHLKMTPKSKHVGEHKGGEDSVFIKTSSLFKNNPDIPDVHRPAVTQLKE
KVFTSDSFAELDLHPHLVATLTKVLNVTTMTSVQKVTIPVLLSGQDAVVRSQTGSGKTLA
YGIPLVQSLQAVEPKIKRGDGPLAVIVVPTRELAQQSFQIFQKLLKPFTWIVPGVLMGGE
KRKAEKARLRKGINILITTPGRLVDHIKNTLSIAFSAVRWLILDEADRILDLGFEKDLTV
ILNSLNATGPPRQNVLLSATLTDGLSRLAGISMKEPVSIQVGENSEGINELTPDHTTAQG
KSDRFAVPERLQQHMVVVPSKLRLVCLAAFILSKCKFEKGHKIIVFVSSCEAVEFLLILF
NAVLSGPKAKQQPPLSFFRLHGNMKQEERTEVFQEFSLCKTGILLCTDVAARGLDMPQVT
WIVQYNPPTTPAEYVHRVGRTARIGAKGSSLLFLTPAEMSYVTSLANHNISLSEMKMEMI
LSTLMLDNRFKVRGKYDGKMSSGALEQEVRDRATVLQTEFENAVHNDDNSVQAAKRALQS
FLRAYTAYPSNMKHIFHIKALHLGHAAKSFGLRDAPQGLVTAPAKGSNKDKGQAKDKRPL
KKFSTEERVASLTRSEYASGIDGDSAAKKKKKKKSQANGEEDRVE
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgcttgatcgaaaaacaacaaagacgtgtttttttattttatttattagggacgtgtat
cgcatcccaccagtcaccatggcagaggatacgttgatgttgaacctctcgtctgactca
gctccagcatttcactcgaagagttatcagagaccaacgtctcaggagaaatgggctttg
aaaaaagcacagaaacgaaaatactcaggaatacagaaagggttacctaataaacaaggg
ttcaatgggcctaagaccaaggaccaacagccccctgaggacaaggacgaagaggatgta
ccagcccataaaagccctgtccgaaagccagcaccaaaggatgcagccaaagccttgtca
tccaaaaccccaaaacctgcccagagagtcaaagcccatctaaaaatgactccaaaaagt
aaacatgtaggggaacacaaaggaggagaggacagtgtgttcataaagacttcgtccctc
tttaaaaataacccagatatcccagacgtccacaggcctgctgtgacccagctgaaggag
aaagtcttcaccagcgactcatttgcagagctggaccttcacccccacctggtggcgacg
ctgaccaaagtgctgaatgtgaccactatgaccagtgtccagaaagtgaccattcctgtc
ctcttgtctggtcaagacgctgtcgtgcgctctcaaacaggatcgggtaaaacgcttgcc
tacgggataccgcttgttcagtctttacaagcagtggaaccaaaaattaagagaggggat
gggcctcttgctgtcatcgtggtccccaccagagagctggcccagcagagctttcagatc
ttccagaagctcctcaagcctttcacgtggatcgtgcctggagtcctgatgggaggagag
aagaggaaggcagagaaagccaggctgcgtaaagggattaacattctgatcaccacgccg
ggccgactggtggaccacatcaagaacactctgagcatagccttcagcgctgtccggtgg
ctcatcctggacgaggctgaccggattctggacctgggctttgagaaggacctgacagtg
atcctcaattccttgaatgccactggacctcccaggcagaacgtgctcctgtctgctact
ctcacagatggcttatcccggttagctgggatcagcatgaaggagccggtcagcatccag
gtgggggagaactcggaggggatcaacgagctgactccggaccacaccacagcccaaggc
aaatcggaccgctttgctgtacccgagaggctgcagcagcacatggtggtggttcccagc
aaactaaggctggtctgcctggcagccttcattctgtccaagtgcaagtttgagaagggt
cacaagataattgtgtttgtgtcgagttgtgaggcagtggagttcctgctgatccttttc
aacgccgtgctctctgggccaaaagccaaacagcagcctccgctcagcttcttccgtctc
cacggcaacatgaagcaggaggaaaggacagaagttttccaagagttctctctctgcaag
actggaattctgctctgtacggatgttgcagcacgtggacttgacatgcctcaggtgaca
tggattgtacagtacaaccctccaaccactccagcagagtatgtgcaccgtgtcgggcga
actgcccgtataggagctaagggaagcagccttctctttctcacccctgctgaaatgtcc
tatgtcacttccctggcaaatcacaatatcagcctgtccgagatgaagatggagatgatt
ctgtcaacgctaatgctggacaaccgcttcaaagtcaggggaaagtatgacggcaagatg
tcttccggggctctggagcaggaggtgcgggatagagcaactgtcctacagacggagttt
gagaatgctgtccataacgacgacaactctgtccaagcagccaagagagccttgcagtcg
ttcctacgggcgtacactgcctacccgtccaacatgaagcacatcttccatatcaaagcc
ctgcacctgggccacgccgccaagagcttcggcctgagggacgccccacagggcctggtc
accgcccctgccaagggctccaacaaagacaagggacaggccaaggacaagagacctctc
aagaagtttagcactgaagagcgggtggccagtctcacgcgctccgaatacgccagcggg
attgatggagactccgcagccaagaagaagaagaagaagaaaagccaagccaacggagag
gaggacagagtggaatag
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