Salmo trutta (river trout): 115167704
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Entry
115167704 CDS
T08542
Symbol
utp15
Name
(RefSeq) U3 small nucleolar RNA-associated protein 15 homolog
KO
K14549
U3 small nucleolar RNA-associated protein 15
Organism
stru
Salmo trutta (river trout)
Pathway
stru03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
115167704 (utp15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
stru03009
]
115167704 (utp15)
Ribosome biogenesis [BR:
stru03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
115167704 (utp15)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_IFT122_1st
UTP15_C
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40
WD40_Prp19
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
WD40_Gbeta
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_1st
ANAPC4_WD40
PAC11
Beta-prop_EML
WD40_RFWD3
NBCH_WD40
Beta-prop_SPT8
Beta-prop_Aladin
Beta-prop_NOL10_N
Beta-prop_RIG_2nd
Beta-prop_ACSF4
DSE1_N
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_IFT122_2nd
Beta-prop_WDR41
Beta-prop_NWD2_C
CFAP251_N
Beta-prop_At4g14310
KNTC1_N
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
115167704
NCBI-ProteinID:
XP_029578216
UniProt:
A0A674DFK0
LinkDB
All DBs
Position
29:45976066..46001399
Genome browser
AA seq
528 aa
AA seq
DB search
MASFKSTKIPIYPKLGEKVTPDTLYWKNYKAPAQIKEFGAVTSIDFSPLAPHNYAVTAST
RIHIYGPFSQEPVKTFTRFKDTAYSGKFRSDGQLLVAGCEDSVVRLFDVSGKVALRVFKG
HTKGVHVTDFTSDCYHILTGSDDYTCRLWDIPNSTELTSYKEHTDYIRCGTTSKLNRDIF
ITGSYDHTLRVFDARVEKSVMTMDHSQPVESVLLYPSEGLLVSAGGRYVKVWDLLKGGQP
LVSLKNHHKTVTCLSLSSNGQRLLSASLDRHVKIYNTTNYKVVHNFDYAASILSLALAPD
DESIVVGMTNGVLSIKHRKSPEEKKEVAGKQRMRPVYRVFVKGRNYVPKKDDFLVSKPVK
SHLAKYDKQLKRFNISKALDTALESWRKNRNPEIMVAVMKELDRRGTLKNALAGRDEQNL
SQLLNFLIGNVVDPRFTPVLITATEMILDIYQAVVGQSSVVDRQLVRLQELVEREIDYQQ
DLLEVLGMLDTLFAASLPRKEVPCPGSSRPNGLAEGGLGAPGPQLQAA
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggcttcattcaaatccacaaaaatcccaatatatcccaaacttggagagaaagttact
ccggacacattgtattggaaaaactacaaggccccagcccagataaaggaatttggagca
gtcacaagcattgacttctcccccctggcaccacacaactatgcagtgacggcttctaca
cggatccacatctacggaccgttttctcaggagccagtcaagacgtttactcgcttcaag
gacacggcgtacagcggaaagttccggtcagatggtcagctcttggtggcaggatgcgag
gactccgtggtgcggctctttgatgtcagcggcaaggtggcgctcagggtgttcaaaggg
cacacaaagggggtgcatgtaacagatttcacctcagactgttatcacatcctgacgggc
tcagacgactacacttgtcgcctgtgggacatccccaattccactgaactgacctcatac
aaggaacacacagactatatccgctgtggcaccaccagcaaactcaacagagatatcttc
ataaccggctcctatgaccacacactaagggtgtttgatgccagagtggaaaagagtgtg
atgaccatggaccacagccagcccgtggagagcgttctactctacccttctgaaggacta
ctggtttcagcaggagggcgctatgtgaaggtgtgggacctgctgaagggaggtcagcct
ctggtgtcactgaagaaccaccacaagaccgtcacctgcctcagtctcagcagcaacgga
cagagactgctctctgcctccctcgacaggcacgtgaaaatctacaacacaaccaactac
aaggtggttcataactttgactacgctgcctccattctcagtctggccctggctcctgat
gacgagtccattgtcgtggggatgaccaatggcgtcctgagcataaaacataggaagagc
cctgaggagaaaaaggaagtggctggcaaacagagaatgcggccagtgtaccgcgtcttt
gtcaaaggaagaaactacgtcccaaaaaaggatgactttcttgtcagcaaaccagtgaag
agccatctggccaaatacgacaaacagctgaagagattcaacatctccaaggccttggat
accgccctggagtcgtggcggaagaacagaaatcctgagatcatggtggcggtgatgaag
gagttagatcgccgaggaactttgaagaacgctctggcaggacgagacgagcagaacctc
tctcaactcctcaatttcctgattgggaatgtagttgatcccaggtttacacctgtcctc
atcactgccactgagatgattctagacatctaccaggcagtggtgggtcagtcttcagta
gtggacagacagcttgtgcgtctccaggagctagtggagagagagattgactaccagcag
gacctcctggaagttctgggaatgttggatactctattcgccgcatccctccccaggaaa
gaggtgccttgcccaggcagcagccggcctaacggcttggcagaggggggtttgggggct
ccaggaccacagctccaggccgcctga
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