Salmo trutta (river trout): 115167909
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Entry
115167909 CDS
T08542
Name
(RefSeq) tubulin alpha-1B chain-like isoform X1
KO
K07374
tubulin alpha
Organism
stru
Salmo trutta (river trout)
Pathway
stru04145
Phagosome
stru04210
Apoptosis
stru04530
Tight junction
stru04540
Gap junction
stru04814
Motor proteins
stru05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
115167909
09143 Cell growth and death
04210 Apoptosis
115167909
09144 Cellular community - eukaryotes
04530 Tight junction
115167909
04540 Gap junction
115167909
09142 Cell motility
04814 Motor proteins
115167909
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
115167909
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115167909
03036 Chromosome and associated proteins [BR:
stru03036
]
115167909
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
stru04812
]
115167909
04147 Exosome [BR:
stru04147
]
115167909
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
115167909
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
115167909
Cytoskeleton proteins [BR:
stru04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
115167909
Exosome [BR:
stru04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
115167909
Exosomal proteins of other body fluids (saliva and urine)
115167909
Exosomal proteins of colorectal cancer cells
115167909
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
115167909
NCBI-ProteinID:
XP_029578506
Ensembl:
ENSSTUG00000004698
LinkDB
All DBs
Position
30:10184377..10216256
Genome browser
AA seq
451 aa
AA seq
DB search
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKAIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
RVRKLSDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGVDTVEGDGQEEGEEY
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgagtgcatctctatccacgtgggtcaggctggtgtccagattggcaatgcgtgc
tgggagctctactgtctggagcatgggatccagccggatggacagatgccatctgacaaa
gccatcggaggtggagacgactccttcaacaccttcttcagtgagactggggctggaaag
catgtccccagggctgtgtttgtggacctggaacccacagtcatagatgaggtgcgcact
gggacctaccgccagttattccatcctgaacagctcatcactggtaaagaggatgctgcc
aacaactatgctcgtggacactacactattggcaaagagatcattgacctggtgctggac
agggtccgcaaactgtctgaccagtgcacaggccttcagggcttcctggttttccacagc
tttggaggtggcaccggctctggtttcacctctctgcttatggagcgcctgtctgttgac
tacggcaagaagtccaagctggagttctccatctatccagctccccaggtgtccacagct
gtggtggaaccttacaactccatcctgaccacccacaccaccctagagcactctgactgt
gctttcatggtggataatgaggcaatatatgacatctgtcgtaggaacctcgacattgag
cgtcccacctacaccaacctcaacaggctcattagccagattgtttcctccattactgct
tcccttcgattcgatggtgctctcaatgttgatttgacagagttccagaccaacttggtg
ccctatccccgaattcattttcctctggccacctatgccccagttatctctgcagagaag
gcttaccatgagcagctctctgtggctgaaatcaccaatgcctgctttgagccggccaat
cagatggtgaaatgtgaccctcgccacggcaagtacatggcatgttgtcttctttaccgt
ggtgatgtggtgcccaaagatgtcaatgctgctattgccaccatcaagaccaaacgttct
attcagtttgttgactggtgcccaactggtttcaaggttggcatcaactatcagcctccc
actgtggtccctggtggagacctggccaaagtccagagggctgtgtgcatgctgagcaac
accactgctattgcagaggcctgggctcgtcttgaccacaagtttgatttgatgtatgct
aaacgtgcctttgtgcactggtatgtgggtgagggcatggaggagggagagttctctgaa
gccagagaggacatggcagccctggagaaggattacgaagaggtgggggttgacactgtc
gagggtgacggacaggaggagggagaggagtattga
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