Salmo trutta (river trout): 115167914
Help
Entry
115167914 CDS
T08542
Name
(RefSeq) hepatocyte nuclear factor 4-alpha-like isoform X1
KO
K07292
hepatocyte nuclear factor 4-alpha
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115167914
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
stru03310
]
115167914
Transcription factors [BR:
stru03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
115167914
Nuclear receptors [BR:
stru03310
]
2. Hepatocyte nuclear factor 4 like
2A. Hepatocyte nuclear factor 4 receptor
115167914
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
115167914
NCBI-ProteinID:
XP_029578512
Ensembl:
ENSSTUG00000004760
LinkDB
All DBs
Position
30:10319444..10353386
Genome browser
AA seq
464 aa
AA seq
DB search
MDMADYSDALDPAYTTLEFENMQVLSMGTDSSPAESANMNTANHLGAVALCAICGDRATG
KHYGASSCDGCKGFFRRSVRKNHMYSCRFNRQCIVDKDKRNQCRYCRLKKCFRAGMKKEG
IQFIQLHSNAVQNERDRISTRRSSYEDSSLPSINALIQADVLSRQISSPGPILNGDIRTK
KIATVTDVCESMKQQLLVLVEWAKYIPAFCDLPLDDQVALLRAHAGEHLLLGVAKRSMLY
KDLLLLGNDHIIPRNCPELEVIRVTVRILDELVLSFQEHQIDDNEYACLKAIVFFDPDAK
GLSDPSKIKRMRYQIQVSLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQFVKL
FGMAKIDNLLQEMLLGGSANEATHTPHSLHPHLVQEHLSNNVIVASNMATPIHNVQISTP
ETPIPSPPTASSSEHYKMAQGVIATVPKQTSSIPQPTITKQEAI
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggacatggcagactatagtgacgccctggacccagcctacaccacattggaatttgaa
aacatgcaagtgctctccatgggcacagactcctcaccggctgagagtgccaacatgaac
acagccaaccacctcggggcggtcgccctgtgtgccatatgtggggacagggccacgggc
aagcactacggggcctctagctgtgacggctgcaaaggttttttccgccggagtgttcgc
aaaaaccacatgtactcatgcaggttcaacagacagtgcattgtggacaaagacaaaagg
aatcaatgcagatactgtcgattgaagaaatgctttcgagctggcatgaaaaaagaaggt
atacaattcattcaacttcattcaaatgctgtacagaacgaaagagacagaatcagcacc
agaagatctagctatgaagacagcagtttaccatctatcaatgcactcatccaggcagat
gtactctcaagacagatatcctcacctgggcccatactgaatggtgacatcaggacgaaa
aagatagcgaccgtcacagatgtgtgtgaatcaatgaaacagcagctgctggtgctggta
gaatgggccaagtacatccctgccttctgtgatctgcctctggatgaccaggtggcattg
ctgcgagctcatgctggagagcatcttttgcttggagttgcaaagaggtctatgttgtac
aaggacctcctgctattaggaaatgaccacattattccccggaactgccccgagttggaa
gtgatccgggtaacagttaggattctggacgagctagtgctgtccttccaggagcaccag
atagacgacaatgaatacgcttgtttgaaagccattgttttcttcgatccagatgccaaa
ggtctgagtgaccccagtaagatcaagcgaatgcgttaccagattcaggtcagcctagag
gactacatcaacgaccggcagtatgactcccgggggcgctttggagaattgctcctgctg
ctgcccacactacagagcatcacctggcagatgatcgaacagatacagtttgtcaagcta
tttgggatggccaagattgacaacctgctccaagagatgctcttaggaggttctgctaac
gaggcaactcacacacctcactctctccatccacacctggttcaggaacacctcagcaac
aatgtcattgtggccagcaacatggctactcccatccataacgtccaaatctccactcct
gaaactccaattccctctcctcccacagcctctagttcagaacactataagatggctcaa
ggggttatagccaccgtgcccaagcaaactagctccatcccgcagccaaccatcaccaaa
caagaagccatctaa
DBGET
integrated database retrieval system