Salmo trutta (river trout): 115167965
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Entry
115167965 CDS
T08542
Name
(RefSeq) ATP-dependent RNA helicase DDX19A-like isoform X1
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
stru
Salmo trutta (river trout)
Pathway
stru03013
Nucleocytoplasmic transport
stru03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115167965
03015 mRNA surveillance pathway
115167965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115167965
Enzymes [BR:
stru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
115167965
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
115167965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
115167965
NCBI-ProteinID:
XP_029578619
Ensembl:
ENSSTUG00000018134
LinkDB
All DBs
Position
30:complement(11935088..11941696)
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AA seq
491 aa
AA seq
DB search
MATDSWALAVDKQESTTDSFGSLVIRSPPRGDAPPNKAKKGTTKQVEDGTNVEGEEKEDK
AAQSLLNKMIHTSLVNTTNQVEVLQRDPNSPLYSVKTFEELRLKDKLLKGVYDMGFNRPS
KIQENALPMMLAEPVYYPSGSRPQNLIAQSQSGTGKTAAFVLAMLSHVDPTNKWAQCLCI
APTYELALQTGKVIEQMGKFYPEVKLAYAIRGNKLDRGAKLQEQIVIGTPGTVLDWCSKL
KIINPKKISVFVLDEADVMIATQGHQDQSIRIQRMLPKECQMLLFSATFEDSVWKFAERV
VPDPNIIKLKREEETLDTIKQYYVLCSDKEEKFTALCNIYGAITIAQAMIFCHTRRTAGW
LAAELTKEGHVVALLSGEMTVEQRAAIIERFREGKEKVLVTTNVCSRGIDVEQVSVVINF
DLPMDKYGNADNETYLHRIGRTGRFGKRGLAVNMIDSKHSMNILNQIEEHFNKKINKLDT
DDLDEIEKISN
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atggctactgactcctgggcccttgctgtcgataaacaggaatctacgactgactcattc
ggctccttggtgataagatctccacctcgaggtgatgctccacctaataaggcaaaaaag
ggtaccacaaagcaagtggaggatggcaccaatgtagaaggggaggaaaaagaggacaaa
gcggcccagtcattgttgaataagatgatccacaccagccttgtgaacactaccaatcaa
gtagaggttcttcagagggatcccaactctcctctttactcggtcaagacatttgaagag
ctgagattgaaagataagctgctaaagggagtgtatgacatgggcttcaacagaccctct
aagatccaggagaatgccctgcccatgatgctggcagagcccgtgtattatccctctggt
tccagacctcagaacctgattgcccaatcacagtccggcacaggtaaaacagctgccttt
gtgctggccatgctcagccatgtcgacccaactaacaaatgggcacagtgtctttgcatt
gccccaacgtacgagctagctttgcagactggtaaagtcattgagcagatggggaaattc
tatcctgaggtcaaattggcatatgccattcgtggcaataaattggaccgaggggcaaag
cttcaggagcagattgtcatcgggacacctggcacagtcttggactggtgctctaaactg
aagatcatcaaccccaagaagatcagcgtctttgtcctggacgaggctgatgtcatgatc
gccacacagggtcaccaggaccagagcatccggatccaaagaatgttgccaaaggaatgt
cagatgctgctgttctctgccacctttgaggactccgtgtggaagtttgctgagagggtt
gtgccagaccccaacatcatcaagctgaaacgtgaagaggagactctggacaccatcaag
cagtattacgtgctttgcagcgacaaggaggaaaagttcacagcactctgtaatatctac
ggcgccatcaccatcgcccaagctatgatcttctgtcacacccgaaggacagctggctgg
ctggctgcagagctgactaaggagggccatgtggtggcgctgctgagtggggagatgact
gtggaacagagagcggccatcatcgaacgcttcagggagggcaaggagaaagtcctggtg
accaccaacgtatgctccagaggcattgatgttgagcaagtttctgtggtgataaatttt
gacctgcccatggacaaatacggaaacgctgacaacgagacataccttcaccggattggt
cgcacaggacgtttcggcaagaggggccttgcagtcaatatgattgacagcaaacacagc
atgaacattctcaaccaaatcgaggaacatttcaataagaagatcaacaagcttgacact
gatgatctcgatgaaattgagaaaatcagcaactag
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