Salmo trutta (river trout): 115168018
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Entry
115168018 CDS
T08542
Name
(RefSeq) cohesin subunit SA-2-like
KO
K06671
cohesin complex subunit SA-1/2
Organism
stru
Salmo trutta (river trout)
Pathway
stru04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
115168018
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
stru03036
]
115168018
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
115168018
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
Motif
Other DBs
NCBI-GeneID:
115168018
NCBI-ProteinID:
XP_029578728
Ensembl:
ENSSTUG00000000222
UniProt:
A0A673VWV0
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All DBs
Position
3:complement(10471413..10506788)
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AA seq
1283 aa
AA seq
DB search
MIAAPELPSEFHYPQDSDTRFSSDTDFSEAPDVSINPTKGKGGKKGKKAAGEKGKGGKGV
GGAGRMNGHYQENGMENLMLFEVVKMGKSAMQSVVDDWIEAYKNDRDMALLDLINFFIQC
SGCKGVVSGEMFRNMQNSEIIRRMTEEFDEDSGDYPLTMAGPLWKKFKGSFCEFIAVLVR
QCQYSIIYDEYLMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSINMDNT
QRQYETERNKNVAKRANDRLELLLQKRKELQENQDEIENMMNAIFKGVFVHRYRDAIAEI
RAITIEEIGMWMKLYSDAFLNDSYLKYVGWTMHDKQGEVRLKCLTALQGLYYNRELNTRL
ELFTSRFKDRIVSMTLDKEYDVAVQAIKLLTLVLHSTDEVLSPEDCESVYHLVYSAHRPV
AIAAGEFLFKKLFSTREPEEEGAPKRRGRQSPNANLIKTTVFFFLESELHEHAAYLVDSL
WESGADLLKDWECMTSLLLDDPVPGEEALTDRQETALIEIMLCTVRQAAECHPPVGRGTG
KRVMTAKEKKTQLDDRTRMTELFAVTLPPLLAKYSIDTEKVTNLLQLPQFFDLDIYTTGR
LEKHLEALLRQIREIVEKHTDIEVLEVCSKTYHALCNDEFTIFNRVDIARSQLLDEMVDK
FNRLLEDFLQEGEEPDDDDAYQVLSTLKRITAFHNAHDLSQWDLFSSNFKLLNTGIENGD
MPEQIVVHALQCTHYVVLWHLAKVSEGSHRKEELVSLRKQMRMFCLMCQRYLTNVNTTVK
EQAFTILCDVLLVFSHQMVSGGREQLEPLVYSPDDSLQTELLSFILHHVFIDQDDDNCST
DGQQDDEAAKIEALHKRRNLLAAYCKLIIYNVVEMNTGADIFKQYMRYYNDYGDIIKETM
SKTRQIDKIQCAKTLILSLQQLFHEMLSELGTGFDRSSSAFCGIKELARRFSLTFGLDQV
KTRDAIAMLHKDGIEFAFKEPSPQGEGNPPLHLAFLDILSEFSSKLMRQDKRTVHMYLER
FMTFQMALQRDDCWLPLISYRNSLQAGGDDDTMSVVSGYSSRGSSVRSKKTKAATPTATV
AAAKRKLPEAEDSSSSSTDMSWQHQSMQTPVMMPSPHLTSTMMRGPGDMREEAKRGRDDS
YMGVYALPSDSQQHPHTLPQTPQLHQTPIDYNTQVTWMLAQRQQEEVRQQQERAMNYAKL
RTNLQQAIRRGTGLMEEDEEPIVEDVMMSSEGRMEDLNEGMDFDTMDIDLPPSKNRRERS
ELKPDYFDPGSIMDESVLGVSMF
NT seq
3852 nt
NT seq
+upstream
nt +downstream
nt
atgatagcagcaccagagttaccgtcagagttccactatcctcaggattcggacacccgt
ttctcctcagacacagacttctctgaggctcctgatgtcagtatcaacccaaccaaagga
aagggggggaagaaggggaagaaggcggcaggcgagaagggtaaaggagggaagggagtg
gggggtgcagggaggatgaacggccactaccaggagaatggcatggagaacctgatgctg
ttcgaggttgtcaagatgggcaaaagcgccatgcagtctgtggtggatgactggattgag
gcgtataaaaacgacagggacatggctctgctagacctgatcaacttcttcatccagtgt
tctggctgtaaaggagtggtcagtggagagatgttccgaaacatgcagaactctgagatc
atcaggaggatgacagaggagtttgacgaggacagcggagactatcctctgaccatggca
ggtccactgtggaagaagtttaagggcagtttctgtgagttcattgctgtcttggtgaga
cagtgtcagtacagcatcatctatgatgagtacctcatggacacggtcatatcgctcctc
accggactgtcggactcacaggtccgagccttcaggcacaccagtacactggcagccatg
aaactgatgacagccctggtgaatgtagctctgaacctgagcatcaacatggacaacaca
cagcggcagtacgagacagagagaaacaagaatgtcgccaagagagccaacgaccggctg
gagctactgctgcagaaacgcaaagagcttcaagaaaatcaggacgaaattgaaaacatg
atgaatgctatattcaagggtgtgtttgtacaccgatatcgtgatgccatagcagagatc
agagccatcactatagaggagattggaatgtggatgaagctgtacagtgacgccttcctc
aacgacagctacctgaaatacgtaggctggaccatgcacgacaagcaaggcgaggtgcgt
ctgaaatgtttgacagcgctgcagggtctctactacaacagagaactgaacaccagactg
gagctgttcaccagccgcttcaaggaccgcattgtctccatgactttggacaaggagtat
gatgtcgcagtacaagcaataaaactgctcactctggtactacatagtacagatgaagta
ctgagcccggaggactgtgagagcgtctatcacctggtctactccgcccaccgaccggtc
gccatagcagccggggagttcctcttcaagaaactcttcagtacacgggagccggaagag
gagggcgcccccaagaggagaggaagacaaagccccaacgccaacctcatcaaaactact
gttttcttcttcctggagagcgagcttcatgagcatgctgcgtacctggtggactctctg
tgggagagtggagcagacctactgaaggactgggagtgtatgaccagcctgctactggac
gaccctgtgccaggggaggaagccctgacagacagacaggagacggctctcatagagata
atgctgtgtacggtacgccaggctgcagagtgccacccacccgtaggccgcggaactggg
aagagggtgatgacagcgaaggagaagaagacccagcttgatgacaggaccagaatgaca
gagctgtttgctgtgacattaccccctctgctggccaagtactccatagatacagagaag
gtgaccaacctgctgcagctccctcagttctttgacctggatatctacaccacaggacga
ctagagaagcacttggaggcgttgctgcgtcagatcagggagatcgtggagaagcacaca
gacatagaggtgctggaggtgtgctcgaagacctaccacgctctctgcaacgacgagttc
accatctttaacagagtggacatcgccaggtcacagcttctggatgaaatggtggacaaa
ttcaacagactgctggaagacttcttacaagagggtgaggagcctgatgatgatgatgcc
taccaggtcctgtctactctcaagagaatcacagcattccacaatgcccatgacctgtcc
cagtgggatctgttcagcagtaacttcaagttgctcaacacgggcattgagaacggtgac
atgccagagcagatagtggtccatgctctacagtgtacccactacgttgtcctgtggcac
ctggccaaggtctcagagggcagccacagaaaggaggagctggtgagcctgaggaaacag
atgaggatgttctgtctgatgtgtcaacgttacctcaccaacgtcaacacaaccgttaag
gaacaggcgttcaccatcctgtgtgatgtgttgctggtctttagtcatcagatggtctca
ggaggcagagagcagctggagccgctggtctacagtcctgatgactcgctacagacagaa
ctactgtccttcatactgcaccatgtctttatagaccaggacgatgacaactgcagcaca
gatggccagcaggatgacgaggcagcgaagatagaagctcttcacaagagacgtaacctc
ctggcagcctactgtaaacttatcatctataatgtagtagagatgaacactggcgctgac
atctttaagcagtacatgaggtattataatgactacggtgacatcatcaaggagaccatg
tctaagaccagacagatagacaagatccaatgtgccaagacactcatcctcagtctacaa
cagttattccatgagatgttgtcagagttggggacaggttttgaccgctcgtcctcagcg
ttctgtgggatcaaggagctggccagacgtttctctctcaccttcggtctggaccaggtc
aaaacacgagacgctatcgccatgctgcacaaggatggtatagagtttgcatttaaggag
cccagtccccagggagagggcaaccctcctcttcacctggccttcctagacatcctctca
gagttttcctccaaactaatgaggcaggacaagaggactgttcacatgtatctggagagg
ttcatgaccttccagatggccctccagagagacgactgctggctaccgctcatctcctac
aggaactccctgcaggctggcggggacgatgacaccatgtctgtcgtctccggctactcc
tccagagggtcgtcggtcagatccaagaagaccaaggctgctactcccactgctaccgtc
gctgcagccaagaggaaactccctgaagctgaggacagcagtagcagcagtacagatatg
tcgtggcagcaccagagcatgcagactcccgtgatgatgccctccccccacctcacctct
accatgatgagaggaccaggggacatgagggaggaggccaaacgggggagagacgacagc
tacatgggagtgtatgccctcccttcagactcccagcagcaccctcacacactcccgcaa
accccacaactccaccagacacccatcgactacaatacccaggtgacgtggatgctggct
cagaggcagcaggaggaggttcgtcagcagcaggagagagccatgaactacgccaagctc
agaaccaacctgcaacaggccattcggcgtggtacagggctgatggaggaggatgaggag
ccgatcgtagaggatgtgatgatgtcgtcagagggtcgtatggaagacctcaacgagggc
atggactttgacaccatggacatcgacctgcccccctctaagaacaggagagagagatca
gagctgaaaccagactactttgaccctggttctatcatggacgagtctgtccttggagtg
tccatgttttaa
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