Salmo trutta (river trout): 115168044
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Entry
115168044 CDS
T08542
Name
(RefSeq) protein SOGA1-like isoform X1
KO
K27704
microtubule cross-linking factor
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
stru03036
]
115168044
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
115168044
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOGA
Motif
Other DBs
NCBI-GeneID:
115168044
NCBI-ProteinID:
XP_029578761
Ensembl:
ENSSTUG00000010920
LinkDB
All DBs
Position
30:14373864..14399607
Genome browser
AA seq
1363 aa
AA seq
DB search
MNSRDGDSPVQKQAHRGQRQPKAQKVFSMKKNRAPSSVQTKDAQGSSRSTGTIRRVVGKG
NEITSEKEMCTGNGVPSVTECQKNQSTLKKLSDARNASGDLSKDSDCVSGKLSSSDSSSE
MSDCTEGFLTASEENQLSADTLSPSSETGSSVRDGDANSDRLSGNALNSVSDMSTVGNPF
TRIDISHDNSIMHSGRDGNHYPGCGGSLLPSLNVSVASLSFSELTGELVDETHEDLVREN
DDLRSENEYLKDEMEELRCEMLEMRDLFLEDEVYQLQELRLQLEQANKMCRILQYRLRKA
ERRSLRVAQTGQVDGELVRSLEHDVKGVLQHPQHSYFNQVAKSVSLRLHNELESVQKKNS
RLEWENEALREMQQELEVAKQVLQAEMEKARESSLKRKNVRSPTNKTEKKLSSQDDSTDL
KCQLHFAKEESALMCKKLAKMVSESEGMREELAKYRSAYGDIDAAAHSSEESPHTREAEV
KVHLRLVEEEATLLSRRIVELEVENRGLRAEMSDMRDSGRVGGEEESLQEGVREHGDLPP
AHVRDAEEGERGLTMEYIHFEAAARERQRRCGIKCSQEEVIEIQHRDQSQMERLGPLKQI
PREGPVGGEREPLDNQQSDTCRGSVANALNAKDHEALLALRDHACLVTSAIQLLASPTQN
GHSSPALSPHLPRAKSYPESKAQPLALDPLMQGHLYEALELLKAMLLALIVRVESLVTPG
GQLRIEGDPIAIPSLADQDTKNNTEVLAKQGTGEGLCTVVLKEKVKRATQSDHLDSCMDP
MMQLTLKMLWVLHQHCLRKGSGLEGKESRDPTTMSMLHGLLQYLGTELQDSEDSIAGQDS
KATWASDWNGLISKMECSTGKTRTQGYPSQPSHPMVTQSEMTETGNMIRPESSTFGSNKK
NWCYLSHEAAQLDRGDPFKTWDHPIMPPSFRNLHLDQLSLDRSHTAPEKTVLRIYYSPLS
ARRVHLVHLRHSTNTDRNGTTSVVSTRLSTSQSSLTPLCLRLSANLSDDMKEMTASLRQA
VHSSSPERRKGRVIMSGGWTVDVATSGTQTQMHPQMVSVGLQTDGPYSIGAVRASPSRLS
ARAQQISTSLERLPGRTERPKSGSTSPKLYRRHSASASSISPSSSFPSSTTGFTTTISNT
TTPNSSTASSATTGSERVLWGLSHRGPAGSTWARPTNPRAGPGLIHHSTINSELSSGGNT
KPTSKPAGANRYGLVTEFLRKMSGRADKPAPASGGAQKGKCSPTHKTLERVPSRPPAAPV
HRNDSVTRIVNQRFMKQREEACRASQAHSQNQAVRKEPSLESNVTLEDRNYDCSSSKSLS
FCFARSSRSSTQRNALTPTKLQRHRYSSAVNGGGSGEPNSSCE
NT seq
4092 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcagggatggtgacagtcccgtgcaaaaacaggcgcaccgaggacaaagacag
cccaaggcgcaaaaggttttcagcatgaagaagaatcgagccccatcgagtgtgcaaacc
aaagatgctcaaggctcatccaggtcaaccgggactatacggcgcgtcgtgggcaaaggg
aatgagattacatcggagaaagagatgtgtacaggaaatggcgtgccatccgttaccgag
tgccaaaagaatcaaagcacacttaagaaactatctgatgccagaaatgcttcgggggat
ttgagcaaggactcagattgcgtctcggggaagctatcatcctcggacagcagttctgaa
atgtctgactgcacggagggatttctgactgcatcagaggaaaaccaactttctgcggac
actctgtctccaagcagcgagactggatcaagtgttcgagacggagacgcaaatagtgac
aggctgagtgggaatgctttaaacagtgtatccgatatgagtactgttggcaacccattc
acacggatagacatatcacatgacaattccatcatgcattctggtagggatggaaaccat
tatcctggatgcggagggtctcttcttccttcgctgaatgtcagcgtagcatccctgtct
ttttcagaactgaccggggagctcgtggacgagacgcacgaggatctggtcagagaaaac
gacgacttgagatcagaaaatgagtatttgaaagatgagatggaggagctgcgctgtgag
atgctggagatgcgggacctcttcctggaggatgaggtgtatcagctgcaggagctgcgg
ctgcagctggagcaggccaataagatgtgtcgcatcctgcagtaccgcctccgaaaggcc
gagcgacgcagcctcagggtggcccagactggccaagtggacggggaacttgtccgctcc
ctggaacacgacgttaagggggtgctgcagcaccctcagcactcctacttcaaccaggta
gcaaagagtgtatccctccgcctacacaatgagttggagtcagtgcagaagaagaactcc
cggctagagtgggagaatgaggcactgcgagagatgcagcaggagctggaggtggcgaag
caagttctgcaggccgagatggagaaagccagagagagttctttgaagagaaaaaatgtc
agatcaccaaccaacaagactgagaagaagctgtcgtctcaggatgacagtactgatcta
aagtgccagctccacttcgcaaaggaggaatcagctctcatgtgcaagaagctggccaag
atggtgtcggagagtgagggcatgcgtgaggaactggcaaagtaccgctcagcctacgga
gatatagacgctgctgcccactcctctgaggagtccccgcacaccagggaggcagaggtc
aaggttcacctgcggctggtggaggaggaagcaacgctcttgagccgccgtatcgtagag
ctggaggtggagaaccgtggcctccgggcggagatgagcgacatgagggatagtggaaga
gtaggaggagaggaggagtcactgcaggaaggtgtcagggaacatggggatttaccacca
gcccatgttagggatgcagaggaaggtgaaaggggtttgacaatggagtacatccacttt
gaggcggcggcgagggagagacagaggagatgtgggattaagtgttctcaggaggaggtg
attgaaatacagcatagagaccaatcccagatggagaggctgggtcccctcaaacagatc
cctcgagaggggcctgtaggtggggaacgggagcccctggacaaccagcagagtgataca
tgcagaggcagtgttgccaatgccttgaatgcgaaagatcatgaggccctccttgccttg
cgagatcatgcctgccttgtgacttcagctatccagcttcttgcctcaccaacccaaaat
ggccacagctcccctgccttatctccccacctcccccgtgcaaagtcttaccctgagagt
aaagcccagcctctggctctggacccactcatgcaaggccacctgtatgaggctctggag
cttctgaaggccatgctgttggccttaattgtgagggtggagagcctggtgacaccagga
ggacagttgaggattgaaggggatcccatcgccatcccctccctggctgatcaggacaca
aagaacaacacagaggtcttagccaagcagggaactggcgaaggcctgtgcacagtagtg
ctgaaggagaaagtgaaacgggcaacacagtcagatcacctcgacagctgcatggacccc
atgatgcagctgaccttaaagatgctctgggtcctccatcagcactgtctgaggaaggga
tctggcctggagggcaaggagagcagagatcccacgaccatgtctatgctacacgggctg
ttgcagtatttgggtacagagctgcaggactcagaggacagcatagcaggacaggattcc
aaggccacatgggcatcagactggaacggcttaatctccaagatggagtgcagcactggg
aagactaggacacagggttatccaagccagccaagtcaccctatggtcacacagagtgag
atgactgagacaggaaatatgatcagaccagaaagttctacatttgggtccaataagaag
aactggtgctatctcagccatgaggcagctcagttggacagaggggacccgtttaagacc
tgggaccatcccatcatgccccctagcttccgcaatctgcacttggaccagttgtccctg
gacaggagccacactgccccagagaagaccgtcctccgcatctactacagtcccctgtct
gcaaggagagtccatctggttcatctgaggcacagcaccaacactgatagaaatggtact
accagtgtagtctccaccaggcttagtacgtcccaaagctctctcactcccctatgtctg
aggctctccgctaacttgagcgacgacatgaaggagatgacagctagcttacgacaggca
gttcactccagttcgccagagaggaggaaggggagggtgatcatgagtggggggtggacg
gtggatgtggccacctcagggactcagacccagatgcacccacagatggtgagtgtgggt
ctacagacggatgggccctacagtataggtgcagtgagagcctccccttcacggctttct
gcccgtgctcaacagatttctacttccctggagaggctcccaggtaggacagaaaggccc
aagtctggctccacctccccaaaactgtatcgcagacactccgcctctgcatcttccatc
tccccctcctcctctttcccttcttccacaactggtttcaccaccaccatatccaacacc
acaacccccaactcctccaccgcctcctctgccaccactggcagcgagcgtgttttatgg
ggcttgtcccatcgtggtccagctgggtcgacgtgggcccgccccaccaatcccagagcc
ggtccagggcttatccaccatagtacaataaacagtgagttgagcagtggtggaaacact
aaacccaccagcaaacctgctggggccaaccggtacggcctagtcactgagttcctacgc
aaaatgagtggtcgggcagacaagccagccccagcatcaggcggggcccagaaggggaaa
tgcagtccaactcataaaaccctagagcgagtgccctctcgtccccctgctgcaccagta
cacaggaacgacagtgtcaccaggattgtgaaccagaggttcatgaagcagagagaggaa
gcatgccgggccagtcaggcccacagtcagaaccaggctgtcagaaaagaaccgagcctg
gagagtaacgtgacacttgaggataggaactatgactgtagcagttccaagtccttgtcc
ttctgcttcgcccgatcatctcgctcctccacccaacgaaacgccttgaccccgaccaag
ctacagcgacatagatactcctctgctgtaaacggtggtgggtcaggagagcccaactcc
agctgtgaatga
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