Salmo trutta (river trout): 115168109
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Entry
115168109 CDS
T08542
Name
(RefSeq) cytoplasmic polyadenylation element-binding protein 4-like isoform X1
KO
K02602
cytoplasmic polyadenylation element-binding protein
Organism
stru
Salmo trutta (river trout)
Pathway
stru04114
Oocyte meiosis
stru04914
Progesterone-mediated oocyte maturation
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09140 Cellular Processes
09143 Cell growth and death
04114 Oocyte meiosis
115168109
09150 Organismal Systems
09152 Endocrine system
04914 Progesterone-mediated oocyte maturation
115168109
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115168109
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
115168109
Factors involved in mRNA localization
Trans-acting binding proteins
115168109
mRNA cycle factors
P-body specific factors
115168109
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_7
CEBP_ZZ
RRM_1
zf-U1
Motif
Other DBs
NCBI-GeneID:
115168109
NCBI-ProteinID:
XP_029578895
Ensembl:
ENSSTUG00000000569
LinkDB
All DBs
Position
3:complement(10705112..10719333)
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AA seq
749 aa
AA seq
DB search
MDDYGFGVLVKNNGSGNKSAFPVRIPPHLQPQPPHLNHPANPSSPPSFVNSTSATNGGGS
AWLFPSVTPHSNMQDEILDSDKSKALDLQDLQEKAQPQVVSPGQQEAGGGLGELDGILPE
DGSMEKGSLETGGKEKLRGGMDSPPVLGGFDYQDSLGMGTSGAQSSTTSSSLTSFNNWSP
TIPSNPSPVIGEDVGGGFFGPAGSNANGPQMLFQNFSHHAGPGFGGAGGSFSPQIGPVSQ
HHPPPHHYHPHNQGVPPQHRRSPAPPHPPQPSFPPHPHRSGAFTQLPHLAPAQSKPPSPW
GSYQSPAPPTSTSWSPGGGGYGGWGGSQGVREYRRGLNGGVTALNSISPLKKSFPNNQVP
SQKYPRNTSGFNQKAWMEDSMSRTDNFPFQQERTRSFDGFSMHSLENSLIDIMRAEQDSL
KGRYGFSHQGGDGSLPMNARSYGRRRGHSNLFPMEDERTFGEDESGDQGLPGLGSAHCFP
HLNGERVERYSRKVFVGGLPPDIDEDEITASFRRFGHLFVDWPHKAESKSYFPPKGYAFL
LFQDESSVQALIDACIEEDGKLYLCVSSPTIKDKPVQIRPWNLNDSDFVMDGSQPLDPRK
TIFVGGVPRPLRAVELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAIS
ARFVQLQHGEIDKRVEVKPYVLDDQLCDECQGTRCGGKFAPFFCANVTCLQYYCEYCWAA
IHSRAGREFHKPLVKEGGDRPRHISFRWN
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atggacgactacggcttcggagtcctggtgaagaataacggcagtggcaacaagtctgct
ttccctgtgaggatccctcctcacctccaaccccagcccccccacctcaatcaccctgcc
aacccctccagccccccttcattcgtcaacagcacctcggccaccaatggagggggtagc
gcctggctgttcccctccgtaacaccccacagtaacatgcaggatgagatccttgactcc
gacaagtccaaagccctggacctccaggacttgcaggagaaggcccagccgcaggtcgtc
tcccctgggcagcaagaggccggaggtggcctaggggagctggatggaatcctacccgag
gacggctccatggagaagggctcgttggagaccggtgggaaggagaagcttaggggtggg
atggactcccctccggtgcttggggggtttgactaccaggacagcctgggaatggggacg
tctggagcccaatcctccaccacctcctcctccttgacctccttcaacaactggtccccg
accataccttccaacccctcccctgttatcggcgaggacgtcgggggtgggttctttggc
ccggctggttccaacgctaacggaccccagatgctgttccagaacttctcccaccacgcg
gggcccggcttcggaggggcggggggcagcttctccccccaaatcggcccggtctcccag
caccaccctcctccccaccactaccacccccacaaccagggggtcccccctcagcaccgt
cgctctccagcccccccccaccctccccagccctccttccctcctcacccccaccgctct
ggagctttcacccagctgccccacctggccccggcccagtccaagcccccctccccttgg
ggcagctaccagagccctgccccccccacttccacctcctggagccccgggggaggtggg
tacggtggctggggagggtcacagggggttcgtgagtaccgcaggggcctcaatggaggg
gtgacggccctcaactccatctcaccacttaagaagtctttccccaacaaccaggttccc
tctcagaagtatcctcgtaatacctctgggttcaaccaaaaggcctggatggaagacagc
atgagtcgcactgacaacttccctttccagcaggagagaacccgttcctttgatggcttc
agcatgcactctctggagaacagtctgattgatattatgagggctgaacaggattccttg
aaaggtcgctatggtttctctcaccagggcggagatgggtctttgcccatgaatgctagg
agctatggcagacgacgaggtcactctaacctgttccctatggaggacgagcggaccttc
ggagaggatgagtcaggtgaccagggacttcctggtttaggatccgcccactgtttccca
cacctcaacggagagcgagtggagagatactcacgcaaggtgtttgtgggaggactgccc
cccgacatagacgaagatgagatcaccgccagtttccgccggttcggtcacctgtttgtc
gattggccccacaaggctgagagcaagtcctatttcccacccaaaggttatgcattctta
ctgttccaagacgagagctctgtccaggctctgatcgatgcctgtatcgaggaggatggc
aagctctacctctgtgtctccagccccaccatcaaggacaagcctgtccagatccgtccc
tggaacctgaacgacagtgactttgtgatggacggctctcagcctctggaccccaggaag
accatcttcgtagggggggtgccacgtcctctacgcgcagtggagctggccatgataatg
gatcgtctgtatggaggagtgtgttacgctggcatcgacacagaccctgagctgaagtac
cctaaaggagcgggccgtgtggcattctccaatcagcagagctacatcgctgctattagc
gctcgattcgttcagctgcagcacggcgagatcgacaaacgggtggaagtgaagccatac
gtgctggatgaccagctgtgtgatgagtgccaggggacacgctgtggggggaagttcgct
cccttcttctgcgctaacgtcacctgtctccagtactactgtgagtactgctgggccgcc
atacactcccgggccggacgagagttccacaagccactggtcaaggaggggggagaccga
ccccgacacatatccttcaggtggaattag
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